Pieris rapae (cabbage white): 110991272
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Entry
110991272 CDS
T05162
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110991272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
110991272
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110991272
mRNA degradation factors
5'-3' decay
Decapping complex
110991272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
DUF7774
EMP24_GP25L
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
110991272
NCBI-ProteinID:
XP_022112278
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Position
10:5952821..5968180
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AA seq
1108 aa
AA seq
DB search
MQPTTMHPKLSDTTQNISFAEEDDMCNALVFATDVVVTTNIGNHNHGSSKVKLTNIVDYN
WEAKFYPGRLIDVHNSGKYLAYCIKPPVSVDGMVRVVYMEPDINERCLIKGMKGEVQDLA
FAFIQNQVLLACIDEFGNIYVHEFMFGDGRLRSTLIAEIQEDTGLGGSAHLVAWCPYIPD
EDDDSSDDDVAKMLLSTHSNVARIWNIREVSAIPGGVIKGKEALNRGLGQIASTHAAALR
AAAFSPDGTALATAGADGYVMFAQVCIDGSDVPRCLHKWQPHDGKPLTCLFFLDNRKNYN
TDVQFWKFAVTGADNNTNIKIWTCKTWMCLQTITFTPPLGTDLPLSLKAQLDASASYLLL
SDFKTRSLYVLNMKRDDEDRMAYCKSVSEFLLPYQVLGFCIVDAEEQLVQCESRCDDPFH
RNGSALDNSPADFDLHDNEVCTVNDAGSKRTKVRLYLMQPKGLQEANLIYTQQPTEKQSD
DSESLTLEEPVEEDEIPSNILQQQTQQLKNLLLRSQNQTNSLINPRVESPTDMPQLNLMT
PDAFSSPGKREEEDTSVTVQDIPRLSNAGCEEDEVASFSSAKQVSGGSSPSREVQQIMSH
NDFYKDDEDESQSPAVEEVTTNGTDTIYPTELYVSPEKSQAPAKLTHSNSETSWPQISLA
QITEANQRKASSDKSSSQSLSAPLPAPLTAPPQPTVVTVVDEATKNKLESLESKLDKLTD
LVTQQARELRAMRNESRPAREFVEQVLVEHTQRTTAAIDTALSNGWERISRIGESASITA
AQAAGAGAARALEPLAAALQHELAVKLTATDKLLSENINKLVNNKTVMERLSVSIASSLS
DMVRTSFRDALLESAVPMIEKAHAQIFRQINHTFQNGTKEFTANTEQAARLAAERGGAAA
ANALRASLEQHTEALARATPLQPQLFAAQLKEVAHSVLEKEMSWWRDQARNVAVQMSRAQ
TPATPSVSDRQLQVSQIQQLLLNGDANGAFQMALQAADLNLVVGTCKSTDPANIFGPPCK
LKQPVLLSLVQQLAADMGRDTHIKLRYIEEALMNLDTNSPATIENLPKVIPGLQKNIANF
LNANPIHALTRQFKVLLMAAESLNKFCA
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgacaaccatgcatcccaaactctccgatactacccaaaatatttcatttgca
gaagaagatgatatgtgcaatgctttagtctttgcaactgatgtggtggttactactaac
attggtaaccataatcatggtagctctaaggtaaaacttacaaatattgtggattacaac
tgggaagcaaaattttatcctggccgtctaattgatgtgcataacagtgggaaatattta
gcttattgcattaaacctccagtatctgtggatggaatggttagagttgtatacatggaa
cctgatataaatgaaagatgtcttattaagggtatgaaaggagaggtccaagatttggct
tttgcattcattcagaatcaagttcttcttgcttgtattgatgaatttgggaatatctat
gtgcatgagtttatgtttggagatgggagactcagatcaacactaattgcggagattcaa
gaggacactggcctggggggttctgctcacttagtggcttggtgcccttacatccctgac
gaagatgacgactccagtgatgatgatgtagctaagatgctactcagcacgcattctaat
gttgctcgcatatggaacatacgcgaagtcagtgcaatacccggtggggttatcaaaggt
aaagaggcgttaaatcgcggcttgggacagatagcaagtacacacgctgcagctctgcgt
gctgctgccttctcccctgatggtacagcactagcaactgcaggagccgatggatatgtt
atgtttgcacaggtatgcatagatggatcagatgtaccccgttgtcttcataaatggcag
ccacatgatggcaaacctctcacctgtctcttctttctggacaaccgtaaaaattataat
actgatgtccaattctggaaattcgcggtaacaggcgctgataataacacgaacataaag
atatggacttgcaaaacctggatgtgcctgcagacgatcacattcacccctcccttgggc
acagatctccctttgagtttaaaggcccaattggatgccagtgcgagctatttgctacta
agtgactttaaaactagaagtctgtatgtgctcaatatgaagagagacgatgaggataga
atggcatattgcaagagtgtttctgagtttttgctaccatatcaggtgcttgggttctgt
attgtagacgctgaggagcaactagtacagtgtgagtcgcgttgtgacgatcccttccac
agaaatggatctgccctcgacaactcccctgccgattttgatttacatgacaacgaggta
tgcacagtaaatgatgcaggttcaaagcgaactaaagtgcgactttatttaatgcaaccc
aaaggtttacaagaggcaaatcttatatatacgcaacaacccactgaaaaacaatcagac
gattcggaaagtttaacgcttgaagagccagtggaagaagacgaaattccttcaaatatc
ctacagcaacaaacacaacaactcaagaatctactacttaggtcacagaatcaaacaaac
agtcttataaatcctcgagtggagtcacctactgatatgccgcagctgaatcttatgacg
ccagacgcttttagctctcctggtaaacgtgaagaagaagatacttcagtaactgttcaa
gatatcccgcgactatcaaatgccggttgcgaagaagatgaggtggccagcttcagttct
gctaagcaggtgtctggtgggtcttcaccgagtcgagaagttcaacaaattatgtctcat
aacgacttttataaggatgatgaagatgaatctcagtcgccagcagtagaagaggtgacc
acaaacggaacagacacaatttatccaactgagttatatgtttcacctgagaaatcgcaa
gcacccgccaaattgacccatagcaacagcgaaacgtcatggcctcaaatttcgttagct
caaatcacggaagcaaaccagcgtaaagcgtctagcgataaatcaagcagtcaatcgctt
tccgctccgctaccagctccgctaaccgctccaccacaacctacagttgtaacagtcgta
gatgaagcgactaaaaataaactggagtctttagaatctaaacttgataagctaacagat
ctagtaacccaacaagcgcgtgaattacgtgcaatgcgcaatgaaagtcgacctgcgcgt
gagttcgtagaacaggtgttagtcgaacacacgcagaggaccaccgccgccatagataca
gctctgtctaacggttgggagcgcatatctcgtattggtgagtccgctagtataacagcg
gcacaagcagcgggagcgggagcggcgagagcgttggaaccactcgcagcggccttacaa
cacgagctggctgtcaaactcacagctacggacaaacttctttccgagaatattaataaa
ctggttaataataagaccgtaatggaacgtctaagtgtgtccatagcgtcctcgttatcg
gacatggtgcgtacgtcgttccgcgatgcattgctagagagcgctgttcccatgatagag
aaagcgcacgcgcagatattccgacagataaatcacacatttcaaaatgggactaaggaa
ttcacagcgaacacagagcaagcggctcgtttagcagcagaaaggggtggggccgctgcc
gccaatgccttacgagcatctctcgaacaacacacggaggctcttgctagggccacgccc
ctgcagcctcaactttttgctgcacagttgaaggaagtcgcacatagtgttttggagaaa
gaaatgtcttggtggcgtgatcaagcaaggaacgtggcagttcaaatgtcacgtgctcaa
acacctgccacgccctctgtgtctgacagacagctgcaagttagccaaattcagcaattg
ttattaaatggcgatgcaaatggggcctttcaaatggctttacaagcggcagatctaaac
ttggtagtaggaacttgtaagagcacggatccggcaaatattttcggcccaccgtgcaaa
ttgaaacagcccgtcctcctttccttagtacagcagctggctgccgatatgggaagagac
acacatatcaaactaaggtatatagaagaagccttaatgaatctggatacaaacagcccg
gccactatagaaaacttaccaaaagtgataccagggctacagaagaatatagcaaacttc
ctcaatgctaatcctatccatgcattgacgcgacagttcaaagttcttctgatggctgcc
gaatcactgaataagttctgtgcctga
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