KEGG   Pieris rapae (cabbage white): 110991649
Entry
110991649         CDS       T05162                                 
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110991649
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prap03400]
    110991649
DNA repair and recombination proteins [BR:prap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     110991649
SSDB
Motif
Pfam: XRCC1_N BRCT PTCB-BRCT PA_Ig-like
Other DBs
NCBI-GeneID: 110991649
NCBI-ProteinID: XP_022112787
LinkDB
Position
6:10966774..10970658
AA seq 543 aa
MPRVKIDYVVSFSNEDPGNPASNLLVPDITKRKWLCQKGETICSVVLQLAKAVQIQSVHI
GAHHTALVEVLVGLSEKPNDPFEVLVPSCVFVSASESRRGSGVDRVRTFSGDQLSSTRLR
PWDRLRVVCSQPYNKHCQVTHRLYGLSFVHVFSPEEVAKTAGGRGPAVALPLETTSDDED
TFRPGELFARHRPPTSAAALAIDAKIRQASSNVLKNISDPSTSLSKVPVGATTSGRDCRD
ASVAGDRNSSPSHNNHEENSKKRKRESCDKREDRDSKKNAPNKETDNSKLSPKRAVAERE
NATTDACGILRGVVFTLSGYQNPRRGLLRDAALSLGARYQPDYTPRCTHLVCAFPNTPKL
RAVRASGQACVAVRGEWLEDCARSRRRLPWRPYATEPRPPDVADPAEADESSGSDTEDEI
ERVIRAKGDVDDDVTRLGSPPRRRRSRLSPDKLLSDRLEGWTCGVCDGLPESRRALLERY
LRASGAHVAPEGRASHVLCQGGHARDRHGTAVPLRPAWLWDAHRLRAAPDPLRYSLCRDP
SSD
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgcctagagtgaaaattgattatgttgttagttttagcaatgaagatcctggaaaccca
gcaagtaatcttctggttccagacatcaccaaaaggaaatggctctgccaaaagggagaa
acaatctgctcagttgttcttcaattggccaaagctgttcagatccagtcagttcacatt
ggagctcaccatacggcattagttgaagtattggttggactttcagaaaaacctaacgat
ccgtttgaggtcttagtcccaagctgtgtgttcgtctcggccagtgagtcccgcagaggg
tcaggcgtggatcgcgtcaggaccttctccggcgatcagctgagctccacacgactgcgg
ccctgggacagactgcgggtggtgtgttcacagccttacaacaagcactgtcaggtgacg
cacagattatatggcctttcctttgtccacgtgttctcccccgaggaagtcgccaagacc
gccgggggcagagggcccgccgttgctctgcctctggagaccacctccgatgacgaagac
acgttccggcccggagagctgttcgcgcggcatcgccctcccacctcggccgccgccctc
gccatcgatgccaaaataagacaagcgtcgtccaacgtgctcaaaaacatctctgacccg
tcgaccagcttgagcaaagtcccggtcggtgcaaccacctcagggcgagactgcagagat
gcttccgtggctggcgatcgaaactctagtccttctcacaataatcacgaagaaaacagt
aaaaagaggaagagagagtcgtgtgataaaagagaagacagagacagcaaaaagaacgcc
ccaaacaaagaaacagacaatagtaagctttctcccaaacgtgccgtggctgagagagag
aatgcaacgacggacgcctgcggcatcctgcggggcgtggtgttcactctgagtggctac
caaaatccccggagggggctcctgagggacgcggctctgagcctgggtgcgcggtatcag
cccgactacacgccgcgctgcacgcacctcgtatgcgcgttccccaacacgccgaagctc
cgagcggtgcgagcgagcggccaggcgtgcgtggccgtgcgcggagagtggctcgaggac
tgcgcccgctctcgccgtcggttgccttggaggccttacgcgacggagccccggccgccg
gacgtcgccgaccccgccgaggcggacgagagctccgggtccgacacggaagacgagata
gagcgcgtgatccgagcgaagggcgacgtcgacgatgacgtcacccgcctcggctccccg
ccgcgccgacgacgctcgcggctctcgcccgacaagctgctgagcgaccgcttggaggga
tggacgtgcggcgtttgcgatggccttcccgagtcgcgccgggccctgctggagcggtac
ctgcgggcgtcgggagcgcacgtggcaccggaggggcgggcgtcgcacgtgctgtgtcag
ggcggacacgcgcgggatcggcacggtacggccgtacccctgcggcccgcctggctctgg
gacgcgcatcgcctgcgggcggcccccgacccccttcggtactcgctctgtcgcgatcca
tcgtccgactga

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