Pieris rapae (cabbage white): 110991804
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Entry
110991804 CDS
T05162
Name
(RefSeq) protein SMG7
KO
K14409
protein SMG7
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110991804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
110991804
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110991804
mRNA cycle factors
Common to processing body (P body) and stress granule
110991804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
110991804
NCBI-ProteinID:
XP_022112999
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Position
2:complement(9797265..9808726)
Genome browser
AA seq
1089 aa
AA seq
DB search
MVLNAAAQVLRDADELKQKVLRCNSGTSMLQDRSLWATQQQLQKAYQKVLTLDLDYALEK
KVEQDLWNVGFKQQIEALQAISKDKKNAQRSEGQAMLSWVLQAAAGFYLCLLHQICTTYK
LDLPFRRRASLVGAIEGWEVSGGMAISKSGVAGARYACQHCLVHLGDLARYRQQLRVAHT
FYRHALAVSPHSGQPYNQLALVAWRRGRRLAAVYWHVRSLLVRAPFPPAPANLARTLAAA
ASRDGKELTILPVLTGVTETNSVAVTKQRLDSHSYVTELLRAIHLLHNVEHLDSASELIN
TLNYSLSPLIATDSFDSLTLIKMACVIIWIVHSTTEDLTLDSEALTESEGKAAQLAASLA
AATLLALLLPAYAADELLTRTLPTLKIFLQWTVCQTKVIKTSAWKTRPQIWAALAHVFNK
LGDTASLNDDKFDSVPLPEDEELNGFLPLEGALKGLIFESHTYQDLPESDGDVAPDVSSL
SLVGEPELEHRVRARRLMLLGKKLAELFPDHLTYTEDDDKITFTASAVGGDQLTEALESL
SLHTESNLEPVEEIIEPPPPIIISEADFREKVREKRVGILKPQGSLERAREERALATTNE
EITDIESSEAGLKTEDKKESRKPRVNIAMAAIMRKQEETNKQVKFVTPPPTPESTDLVSK
DDKPVTIQPKAIKSLANLPIGRKTGGILSLKDKSAGYPHLVNAEPEPKKVEEKKESPPNQ
NIPQRQESPWQQNFEAQRVNYQKNFGPQNAGASYSPNYANQGIRLPVVNPKEIDVRTAAL
QKQNSRQEMFQEGKFQNYQISGDKKNFLNDLPPRFANQYRYWQAAQDTQTNENKFRDDNF
KANTCQQNWPTEQSYQPVSWWKPEPVNSSYTPPMMPNFYPQVPNMNPYQNLPFNQIPGQN
MQNMGQSIPNMGHNMQNLGQNIQLGPNVQNIPKNDSLVPNYMQSSIGQMPTLQNLVTSPN
FNTSVGGLSYNAPSYDAAMYPQFGKYYQPLQMMDKPNFPNKDVLNFGSNLDMQQRLNFQE
GNMKPLDSIGGPSSSSVGEPSDTNTYSLFSGSEAPRHALPQQSLWSGPGSPLERLLEQQK
QNKHPPAPR
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggttttaaacgcagctgctcaagtcttaagggatgcagatgagttaaaacagaaagtt
ttaagatgtaacagtggaacctctatgctgcaagacagaagtctttgggctacacaacaa
cagttgcagaaagcttatcagaaagtattgacattagatttggactatgccttagaaaag
aaagtagaacaagatctctggaatgtagggtttaagcagcagattgaggccttacaggcc
atttctaaggacaaaaagaatgctcaaaggagtgaaggacaagcaatgttgtcatgggta
ttgcaggctgcagcaggattctacttatgtctactgcatcaaatttgtactacatataaa
ttagatttgccattcagacgccgtgcatctcttgttggtgcaattgaaggttgggaagtt
agtggtggaatggccatcagcaaatctggagtagctggggcacgatatgcctgccaacat
tgcctcgtacatcttggtgatttagcccgatatagacaacagctccgagttgcccacacc
ttttataggcatgctttggctgtgtctccccattctggacagccttataaccagctagca
ctagtcgcttggcgtcgaggtcgtcgactagcagcggtgtattggcatgttcgctcgttg
ctagtacgagcaccttttccaccggcgcctgctaatcttgcacgcactttagctgccgct
gccagtcgcgacggcaaagaattgacaattctgccagttctcactggagtgacagaaact
aattcagtcgcagtgaccaaacaaaggttggattctcactcatatgtgaccgaattattg
cgagccatacacctcctacataatgttgagcatttggacagcgcatctgaactaatcaac
acattaaactattcgctatctccactcatcgcaacggacagttttgattcactcacactt
atcaagatggcctgcgtcatcatatggatagtgcactccacaactgaggatctaacgttg
gatagcgaagcgctgaccgagtctgaagggaaggcagctcaactggccgcttccctggcc
gccgcgacacttctcgcgttgctgctgccggcctatgctgcggatgaactcttgacgaga
acattgccaacgttaaaaatattcctgcaatggacggtttgccaaacgaaagtgatcaag
acatcggcttggaaaacgcggccgcaaatttgggctgcgcttgcgcatgttttcaacaaa
ttaggggacaccgcttcgctgaatgatgataaatttgactcggttccactgccagaggac
gaggagctgaacggtttcctgccgctagagggcgctctcaaggggctcatcttcgaaagt
cacacctatcaagatttaccggaatccgatggagatgtcgcgcccgatgtgagcagtctc
agtctagtgggggaaccggaattggagcatcgagtgcgcgcgcgcagacttatgttactc
gggaagaaactagcagaactgtttcccgaccatttaacatataccgaagacgacgataaa
ataacgtttacggcgagcgcagtcggcggtgatcaattgactgaggcattggaatcgttg
tctttacacacggaatcgaatctggaaccggtagaggaaataattgaaccacctccaccg
atcattatatctgaggctgattttagagaaaaagtgcgagaaaaacgcgtaggaatacta
aagccccagggttcgttggagcgagctcgtgaagaacgtgcactcgcaacaaccaacgag
gagatcacggacatagaaagcagtgaagctggcctgaaaactgaagataaaaaagaatct
cggaaaccgcgagtcaatattgcgatggctgccatcatgcggaaacaagaagaaaccaac
aaacaggtgaaatttgtaactccacctcctacaccggagtcgactgatctcgtatctaaa
gatgacaaacctgtaactattcaaccaaaagccatcaaatctttggcgaacctgccgatc
ggcagaaagactggtggaatactttctcttaaggacaagtctgccggctacccacatttg
gtcaacgctgagccggaaccgaagaaagtcgaggaaaagaaggagtctcccccgaatcaa
aatataccacaaaggcaggaatcaccgtggcagcaaaattttgaagcgcaacgtgtgaat
taccaaaaaaatttcggcccacagaacgccggcgccagctacagcccgaattatgccaac
caagggatacgactcccggttgtcaacccgaaggagatcgacgtccgaacggccgcttta
caaaaacaaaactcccgtcaagaaatgtttcaagaggggaaatttcaaaattaccaaatt
tctggggacaaaaagaatttcttgaacgatctgccgccgcgattcgccaatcagtacaga
tattggcaagcggcacaagacacccagacgaatgaaaacaagttcagagacgacaacttc
aaagctaacacctgccagcagaattggccgacggagcaatcataccagccggtgtcgtgg
tggaagccggagcccgtcaactcgagttatacgccgccgatgatgcccaatttctacccc
caagtgccgaacatgaatccataccagaatttaccgtttaaccaaattccaggtcaaaat
atgcagaatatgggtcagagtattccgaacatgggtcataatatgcaaaatctcggacag
aacatacaattggggccaaacgtacaaaacattccgaaaaatgacagcttagtgccaaac
tacatgcagtctagtattgggcaaatgccgaccctgcagaacttggtgacgtcacctaac
ttcaatacctcggtgggaggtctgagttacaacgcacctagctatgatgcagcgatgtac
ccgcagtttggcaaatactaccaacctttacaaatgatggacaagcccaacttcccaaac
aaagatgttctcaacttcggctccaacctggacatgcaacagaggttaaactttcaggaa
gggaatatgaaacctttggattctattgggggtccgtcttcgagtagtgttggtgagcca
agcgatacaaatacttactccctgttcagtggatctgaagcacctagacacgccttacct
caacagtctctgtggtctggccccggatctcccctcgaacgtttacttgagcagcaaaag
cagaacaagcatccaccagcaccgcgatga
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