Pieris rapae (cabbage white): 110991812
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Entry
110991812 CDS
T05162
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110991812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
110991812
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110991812
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
110991812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
110991812
NCBI-ProteinID:
XP_022113025
LinkDB
All DBs
Position
2:complement(8463852..8465026)
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AA seq
222 aa
AA seq
DB search
MQIDKEESKQTTEDIKICIPGMRISPCNKETMSGAGTYELDGYIYTYLAGILKSQYDEVK
KANILSIESPKSPSVLPQMGDVATARVIAVNSRLVQCQILCVGPTVLARPYRGILKKEDI
RDMDKDRIDPYKCFRPGDVILARVLPMTELHAYHLSTAENELGVVIATAEGSPQGVSMVP
ISWSEMQCPTTLNKEPRKVARVIPETINKEFVLASQPELGKS
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatagataaagaagaatcaaaacaaacgacagaagacattaaaatatgtatacct
ggaatgcgcataagtccatgcaataaagaaactatgtcaggggctggcacatatgaacta
gatggttatatatacacgtatctagcaggaattttgaaatcacagtatgatgaggttaaa
aaggcaaacattttatccatagaaagtccaaaaagccctagtgtgcttcctcaaatggga
gatgtagccacagcaagagtaatagctgtaaactcccgcttagtacaatgccagatactt
tgcgtgggtccaacggtgttagctaggccatacagaggaattctgaaaaaggaagatata
agagatatggataaagatagaatcgatccctataagtgcttcagacccggggatgttatt
ttagcaagagttttaccaatgacagagctacatgcttatcacctatccactgcagaaaat
gagcttggtgtagtaattgcaactgctgaaggctctccacaaggagtaagcatggttcct
atcagttggtctgaaatgcagtgccctacaacattaaacaaagagcccaggaaagtagca
agagtaatacctgaaactatcaataaagaatttgtgttagcaagtcaacctgaattgggg
aagagttga
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