Pieris rapae (cabbage white): 110991943
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Entry
110991943 CDS
T05162
Name
(RefSeq) ATP-dependent RNA helicase vasa isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prap03036
]
110991943
Enzymes [BR:
prap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110991943
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110991943
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-GeneID:
110991943
NCBI-ProteinID:
XP_045490389
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Position
3:complement(3147627..3158364)
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AA seq
605 aa
AA seq
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MDDEWDDSCDMVVNPVVPAYNHYNDVDEGHSVSAMGRGFTTFIDEQDGGYFNKDSSNGFG
ERRGRGGRGGRGGRGGRGGNRDRGDYENGDAGNYNGDREDRGERGRGRGRGRGGSRGGGR
MGGGDSPTEGDGEVKKPEPVTYIPPDPTENEVEMFGSSISSGINFDKFDHIAVKVTGENP
PQAIESFERANLRKIVVDNVLKSGYKKPTPIQKHAIPIIMNGRDLMGCAQTGSGKTAAFL
VPIINALLQDSRELIVGENGCAQPQVIIVSPTRELTLQIFNEARKFAFGTVLKVATAYGG
TAVRHQSEQISRGCHILVATPGRLHDFVDRNRISFESIRFIVLDEADRMLDMGFIPSIDK
MMQNPTMVQGTDRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASADVEQIFYEVS
KYEKKTKLQELVSDNVNKRVLVFVETKRNADFIASLLSEQQMLTTSIHGDRLQREREEAL
HNFKSGRHVILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF
YDSEQDSALAADLAKILRQADQAVPDFLEGGGTSTYRSNKYGGSDIRNFNNAVSADPGQE
PEEEW
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaatgggatgattcttgtgatatggtggtgaatccagttgtaccagcatat
aaccactacaatgatgtggatgaaggccatagtgtgtcagccatgggcaggggcttcaca
acttttatagatgaacaagacggcggatattttaacaaagacagtagcaacggctttggt
gaacggcgtggacgcggcgggcggggaggacgcggggggcgcggtggacgaggcgggaat
cgagatcgaggcgattatgaaaatggcgacgcaggcaattacaatggtgacagagaagac
agaggtgaaagaggtcgtgggcgtggcaggggcagaggtggaagtcgcggcggtggacga
atgggcggaggtgattctccaactgaaggtgatggagaagtcaagaagccagagccagta
acctacataccaccagaccccacagagaatgaagtcgaaatgttcggcagttcgattagt
tcaggaataaattttgacaaattcgatcatattgctgtaaaggtaactggcgagaatccg
ccccaagcaatcgaaagctttgaaagagctaaccttaggaaaatcgttgtggacaacgta
ttaaaatctggatataaaaagcccacgcccatacagaaacatgccataccgatcatcatg
aatggccgggacttgatgggatgcgcacaaacgggatcagggaagactgcggcgtttctc
gtccccatcatcaacgcgttgctacaagacagtcgggaactaattgtaggagaaaatggt
tgcgctcagccgcaggtgatcatagtttctcccacacgagagttgaccttacaaatattt
aatgaggcgaggaagtttgcgttcggaaccgttctgaaagtggctacagcatacggcggc
accgctgtacgccatcagagcgagcagatctccagaggttgtcatattctggtagccact
ccggggcgattacacgattttgtagaccgaaatcgcatctcgttcgagagtatacgcttc
attgtgctggatgaggctgaccgaatgcttgatatgggttttataccatctattgataaa
atgatgcagaatcctaccatggtgcaaggtactgatcgacaaactctgatgttctcggca
acgttccctgaagatatccagcacttggctggccgtttcctcaacaactatctattcgtg
gcggtcggtattgtgggcggggccagcgcggacgtcgaacaaatcttctatgaggtctcc
aaatatgagaaaaagactaaattgcaagaactagtttcagataatgttaataaacgcgtt
ttggtattcgtggagacaaaacgtaacgcagacttcatagcttcgttactatctgagcag
cagatgctaaccacttctattcatggagaccgacttcaacgcgaaagagaagaagctctt
cataacttcaagagtggtcggcacgtcatacttgttgctactgctgtcgcggctagggga
ctagatataaagaacgttgatatagttgttaactatgacctgccaaagagtattgatgaa
tatgttcaccgtatcgggcgaaccggacgagttggaaatcgagggaaggctgtctccttc
tatgactcagaacaggactcggctctggctgctgacttagccaaaattcttcgtcaggca
gatcaagcagtgccagatttccttgaaggaggcggcacttccacatacaggagtaacaag
tatggaggcagtgatatcagaaacttcaacaatgccgtttctgctgaccctggccaggag
ccagaagaagaatggtaa
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