Pieris rapae (cabbage white): 110992142
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Entry
110992142 CDS
T05162
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110992142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prap03021
]
110992142
03036 Chromosome and associated proteins [BR:
prap03036
]
110992142
Transcription machinery [BR:
prap03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110992142
Coactivators
SAGA/TFTC/STAGA complex
110992142
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110992142
STAGA complex
110992142
TFTC complex
110992142
SAGA complex
110992142
SLIK complex
110992142
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
TFIID_NTD2
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_SPT8
DSE1_N
Beta-prop_IFT140_1st
CFAP251_N
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_HPS5
Ge1_WD40
ASA1
PAC11
Beta-prop_NOL10_N
WDR54
TRM82_WD
Motif
Other DBs
NCBI-GeneID:
110992142
NCBI-ProteinID:
XP_022113528
LinkDB
All DBs
Position
8:complement(7031454..7036082)
Genome browser
AA seq
648 aa
AA seq
DB search
MKRNKNDAVKAVVTSYLERRNYPDIDIFNTNNSISQSAEEMAVATIVQCESSRANSVLFS
CINNDPGQYDIQYTRLFNFIKELKIEQVRSELLGLLTPLLCHLYLEMLRGGHSGPAQMFL
KRHSASLPQKDLSYHQPIDGNLPSALYRPNSLEQLFNSIQNGTIDNETPEKDYMNQLLDD
IGSVYSLQEIETRPTIAAFRSCKFDICLSQDSLNMLKAYLAKHGHVLMIQVLQTWFHIDV
NGENGKSNTEDEEEEDSKDKIKIELNISENVTDVFSKCNGHSEYAVDKELRDLQDAIKGV
RESLAPLKLYKIAAPDTELICAKTDQYCNVLCGGFSNSEIRLWDLGQNNINRRINRNISE
IELACSVPPDPEINDNTRQIGTGIPLRGHSGPVQAVSILSREELVLSASHDSTMRAWRIS
DYSCASVYRGHNYPIWCLDVSKNGLFIVTGSHDRTAKLWSLDRTFPVRIFVGHMSDVTCV
KFHPNEAYVATGSADRSVRLWAVCDARLVRVLCSHRGAVRALAFSPSGTHLASAGDDKKI
KVWDLAACTCVHEYRGHYGKVTSIDWSAVGKPTLTNRISSDLSDMTTDNSILCSAGMDGI
VKVVWDSQLKNKQLSSPDNSTSTFNTKCNYLVDVQVHPDWMVAIGTKK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaaataaaaacgatgccgttaaagccgttgttacttcctacttagaacgtaga
aattacccagatattgatatatttaataccaacaactctataagtcaaagtgcggaggaa
atggcagtcgctactattgtacagtgtgaatccagtcgtgccaattctgttttattttct
tgtattaataatgaccctggtcagtatgatattcagtatactagactatttaattttata
aaagaactcaaaatagagcaagtaagaagtgaattactgggcttattaacaccacttctt
tgtcacttgtacttggaaatgttaagaggcggtcatagtggacctgcacaaatgtttttg
aagcgacattcagcatcacttcctcaaaaagatttatcttaccaccagccaattgatggt
aacctaccctcagctctttataggcctaacagcttagaacagctatttaattctatacaa
aatggtactattgataatgaaacacctgagaaagattacatgaatcaactgcttgatgac
attgggtcagtttatagtcttcaagagatagaaaccagaccaactattgcagcatttagg
tcttgtaaatttgacatttgtttgtcccaagattccctgaatatgcttaaggcatattta
gcaaaacatggtcatgttttaatgatacaggtgttgcagacttggtttcacatagatgtt
aatggagaaaatggtaaaagtaatactgaagatgaagaagaagaggattctaaggataaa
atcaaaattgaactcaatataagtgaaaatgtaactgatgtgttctctaaatgtaatgga
cattctgaatatgcagtagacaaagaactaagggatcttcaagatgcaataaagggagta
agggaatctctggcaccactgaaattgtataaaatagccgcccctgatactgaattaata
tgtgcaaaaactgatcaatactgtaatgttttatgcggaggatttagtaattcggaaata
agattgtgggaccttggtcagaataatattaatagaagaattaatagaaatatttcagaa
atagagctggcgtgtagcgttccaccagatccagaaataaatgataatacaaggcaaata
ggtacaggcattcccttacgaggtcattcgggacctgtacaagcagtcagcattttgtcc
agagaggaattagttctttctgcctcacatgacagtacaatgagggcatggcgaatatcg
gactattcgtgtgcttccgtttataggggtcataattatccaatatggtgtttggatgta
tcgaaaaatggcctatttatagtaactggttcacacgacaggacagctaagttgtggtca
cttgatagaacattccctgtgagaatatttgttggacatatgtctgacgtcacgtgcgtt
aaattccaccctaacgaggcgtatgtagcgacgggaagtgctgatcgatccgtgcgtctg
tgggcagtgtgcgacgcaagactagtacgcgtactttgctcgcatcgcggggccgtaaga
gcgcttgccttttcgccaagtggaacgcatctcgcctctgcaggcgatgacaagaaaatc
aaagtatgggatttggctgcatgcacatgtgtacatgaatacaggggccattatggaaaa
gtgacatccatagattggtctgctgttggaaagccaactttaacaaacagaatttcttca
gacctaagtgatatgactacagataactctatcctatgttcggccggaatggatggtatt
gtgaaagttgtttgggatagtcaattgaaaaacaaacagttatctagtccagacaattca
acatcaacctttaatactaaatgtaattatttagtagatgtacaggtacatcctgattgg
atggttgctataggtactaagaaatga
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integrated database retrieval system
