Pieris rapae (cabbage white): 110992142
Help
Entry
110992142 CDS
T05162
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110992142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prap03021
]
110992142
03036 Chromosome and associated proteins [BR:
prap03036
]
110992142
Transcription machinery [BR:
prap03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110992142
Coactivators
SAGA/TFTC/STAGA complex
110992142
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110992142
STAGA complex
110992142
TFTC complex
110992142
SAGA complex
110992142
SLIK complex
110992142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
TFIID_NTD2
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_HPS5
Ge1_WD40
WD40_like
WDR54
Motif
Other DBs
NCBI-GeneID:
110992142
NCBI-ProteinID:
XP_022113528
LinkDB
All DBs
Position
8:complement(7031454..7036082)
Genome browser
AA seq
648 aa
AA seq
DB search
MKRNKNDAVKAVVTSYLERRNYPDIDIFNTNNSISQSAEEMAVATIVQCESSRANSVLFS
CINNDPGQYDIQYTRLFNFIKELKIEQVRSELLGLLTPLLCHLYLEMLRGGHSGPAQMFL
KRHSASLPQKDLSYHQPIDGNLPSALYRPNSLEQLFNSIQNGTIDNETPEKDYMNQLLDD
IGSVYSLQEIETRPTIAAFRSCKFDICLSQDSLNMLKAYLAKHGHVLMIQVLQTWFHIDV
NGENGKSNTEDEEEEDSKDKIKIELNISENVTDVFSKCNGHSEYAVDKELRDLQDAIKGV
RESLAPLKLYKIAAPDTELICAKTDQYCNVLCGGFSNSEIRLWDLGQNNINRRINRNISE
IELACSVPPDPEINDNTRQIGTGIPLRGHSGPVQAVSILSREELVLSASHDSTMRAWRIS
DYSCASVYRGHNYPIWCLDVSKNGLFIVTGSHDRTAKLWSLDRTFPVRIFVGHMSDVTCV
KFHPNEAYVATGSADRSVRLWAVCDARLVRVLCSHRGAVRALAFSPSGTHLASAGDDKKI
KVWDLAACTCVHEYRGHYGKVTSIDWSAVGKPTLTNRISSDLSDMTTDNSILCSAGMDGI
VKVVWDSQLKNKQLSSPDNSTSTFNTKCNYLVDVQVHPDWMVAIGTKK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaaataaaaacgatgccgttaaagccgttgttacttcctacttagaacgtaga
aattacccagatattgatatatttaataccaacaactctataagtcaaagtgcggaggaa
atggcagtcgctactattgtacagtgtgaatccagtcgtgccaattctgttttattttct
tgtattaataatgaccctggtcagtatgatattcagtatactagactatttaattttata
aaagaactcaaaatagagcaagtaagaagtgaattactgggcttattaacaccacttctt
tgtcacttgtacttggaaatgttaagaggcggtcatagtggacctgcacaaatgtttttg
aagcgacattcagcatcacttcctcaaaaagatttatcttaccaccagccaattgatggt
aacctaccctcagctctttataggcctaacagcttagaacagctatttaattctatacaa
aatggtactattgataatgaaacacctgagaaagattacatgaatcaactgcttgatgac
attgggtcagtttatagtcttcaagagatagaaaccagaccaactattgcagcatttagg
tcttgtaaatttgacatttgtttgtcccaagattccctgaatatgcttaaggcatattta
gcaaaacatggtcatgttttaatgatacaggtgttgcagacttggtttcacatagatgtt
aatggagaaaatggtaaaagtaatactgaagatgaagaagaagaggattctaaggataaa
atcaaaattgaactcaatataagtgaaaatgtaactgatgtgttctctaaatgtaatgga
cattctgaatatgcagtagacaaagaactaagggatcttcaagatgcaataaagggagta
agggaatctctggcaccactgaaattgtataaaatagccgcccctgatactgaattaata
tgtgcaaaaactgatcaatactgtaatgttttatgcggaggatttagtaattcggaaata
agattgtgggaccttggtcagaataatattaatagaagaattaatagaaatatttcagaa
atagagctggcgtgtagcgttccaccagatccagaaataaatgataatacaaggcaaata
ggtacaggcattcccttacgaggtcattcgggacctgtacaagcagtcagcattttgtcc
agagaggaattagttctttctgcctcacatgacagtacaatgagggcatggcgaatatcg
gactattcgtgtgcttccgtttataggggtcataattatccaatatggtgtttggatgta
tcgaaaaatggcctatttatagtaactggttcacacgacaggacagctaagttgtggtca
cttgatagaacattccctgtgagaatatttgttggacatatgtctgacgtcacgtgcgtt
aaattccaccctaacgaggcgtatgtagcgacgggaagtgctgatcgatccgtgcgtctg
tgggcagtgtgcgacgcaagactagtacgcgtactttgctcgcatcgcggggccgtaaga
gcgcttgccttttcgccaagtggaacgcatctcgcctctgcaggcgatgacaagaaaatc
aaagtatgggatttggctgcatgcacatgtgtacatgaatacaggggccattatggaaaa
gtgacatccatagattggtctgctgttggaaagccaactttaacaaacagaatttcttca
gacctaagtgatatgactacagataactctatcctatgttcggccggaatggatggtatt
gtgaaagttgtttgggatagtcaattgaaaaacaaacagttatctagtccagacaattca
acatcaacctttaatactaaatgtaattatttagtagatgtacaggtacatcctgattgg
atggttgctataggtactaagaaatga
DBGET
integrated database retrieval system
