Pieris rapae (cabbage white): 110992150
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Entry
110992150 CDS
T05162
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110992150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prap04131
]
110992150
Membrane trafficking [BR:
prap04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110992150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_LRRK2
C1_1
SbcD_C
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
110992150
NCBI-ProteinID:
XP_022113542
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Position
8:6851522..6858356
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AA seq
1135 aa
AA seq
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MMDTLKTPSIPSLLDSDIESVGSFRYDDFEELDEEEYALPASEAPTLEEILSSDVNEQAE
IELAEEVTEKEAKEPATCSALQVDFLQAVSQQLTQAEERSSAGPATALSVGSNGRLTVGT
AHGHLLSFHDQTLRWVCNGNGDCGAVTCLAYNYDSTRLLVGFARGHVFQYESLQGVVLRK
ITLGGETWGILRVTWAGTAGLALDTGGSVWLIRFSRPLGVRSAKVSCLFSGARGEVLAMA
ARDARILALVTLTRVIVVAGGQAAGVRIAEPSNLMPVIEWFDPNNRLLVCARGLVLQWLT
VTITGPGSKLGLKPVKRVELKTTPLWLGWLGGSLTIFDSEENLRVWGDDYDKPLDLSHIE
PVYASAFFKGHWTDGRVSQAMCKAGDSALAGACVSEGTLSILGRRGIVRIGPRDILTRAQ
AFMASGHHLQALKLLCSTQGPKSSELAREFVINISERPHILSNKNVAVQVVKLCFKFGLS
DELWSCLWENCSRENAFVEALGDAAVRGDMADNPPTPDFTQALMERLADFEPDLVERVVA
SLPLTAIDPHRASLFTRERKLWRGVAAIAAALDGCSGAMRELVQYVDPECRLRGDCQCAG
GALVLAAADALAARSPACRPLPPHAKPSARHDALHTLLHEEGEQKCPLRALVEHETSAAV
RLVEQCSRDPPFAGPLGKQNRLRVARALISYSVHIQEPDRKLEILQFITGQLSNGSLPLD
QELIEKVKDLACSIPGEKAERAWLDVLLRLRAHRERLLQQYRDALPRPRLLWRIDTLLNK
HELAIKEFFDIENPSERDVDELFEYIQSRIEVDSAAKSQLHEYLPALIKLRPNAAASLLT
DEAMESLAPVVKQLTPERTLEFGKCLLDMERLTGDVAALYLRCLCITRPTEVKQFLTAHA
GIVRPEDALSLVKELGPKHAEPMCLEAVGDHAGALDASLRLIRNAPEEHRPALADEASKL
CVRIAPTVPRSVAAEMWTRLVRSVDALPPATLFEAVAYMPLKELLVKSCNSAQVRSILAD
GASGRAMWQSAGRIAGREAHEALARALSVARRGLRVQGRCVRCGEALETRVGVRTAHCSR
AFHADCEVSAVCECGRRLPSALLTLPPLAVPRPLPPQQFKLLLVAPPRPDLEGLV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgatggatactttaaaaacaccatccataccatctttgctagattctgatattgaatca
gtgggaagctttcgctatgatgactttgaagagttggatgaggaagaatatgcactacca
gctagtgaagcaccaactttagaagaaatcttatcttctgatgttaatgaacaggctgaa
atagaattggctgaagaagtgacagagaaagaagctaaggaacctgcaacatgttctgct
ttacaagttgatttcttgcaagcagtctcacaacaacttacacaagcagaggaaagatct
tctgctggaccagctactgctttaagtgtaggtagcaatggtagactaactgttggcact
gcacatgggcatttattatcatttcatgatcagactttaaggtgggtatgtaatggcaat
ggagattgtggtgcagtcacttgcctggcatataattatgacagtacccgtcttttggtg
ggttttgcaagagggcatgttttccagtacgaaagtctacaaggggttgtattacgtaaa
ataacactagggggagaaacttggggtattttgagggtaacatgggcaggtacagctgga
ttagcactggacacaggtggttcagtgtggcttataagattttcaagaccattgggtgtt
cgatctgcaaaagtatcctgcctgttctctggtgcaagaggggaagttttggctatggct
gcaagagatgccaggatattagctttggttactctcactcgtgttatagtcgtagctgga
ggacaggctgctggagtacgtatagctgaaccttcaaatttgatgcctgtgattgaatgg
tttgatcccaacaaccgcttactggtatgtgccagaggcttagtgcttcaatggcttact
gttacaattactggaccaggaagtaagttaggactcaagcctgtaaaaagagtagaatta
aaaactacacctttgtggcttgggtggcttggtggtagtttgacaatatttgattctgag
gagaatctccgtgtttggggtgatgattatgacaaacctttggatttgtctcatattgaa
cctgtatatgcttctgcattttttaagggacattggacagatggtcgtgtatcacaggcc
atgtgtaaagccggcgatagtgctttagccggcgcttgcgtttctgaagggacattgtct
atcttgggacgtcgtggcattgtgcgaataggcccccgtgatatcctgactagagctcag
gcatttatggcttcaggacatcatttacaagcactaaaattgctttgctcgactcaggga
ccaaaaagtagcgagcttgcgagagaattcgttataaatatttccgagcgcccgcatata
ctcagcaataaaaacgttgcagtgcaagttgttaaattgtgctttaaatttggattaagt
gacgagttatggtcgtgtctgtgggaaaattgttcgcgagaaaatgcgtttgtagaggca
cttggagacgctgccgtgcgtggcgacatggctgacaacccgccgactccagattttact
caggcgttaatggagaggctggccgatttcgagccagatctagttgaacgtgtagtcgca
tctttacctcttacagccatagacccgcaccgcgccagtttgtttacgcgggaaaggaaa
ttatggcggggcgtcgcggccattgctgctgctctagatggatgtagcggtgccatgcgc
gaactagtccaatacgtagaccctgagtgtagattgcgtggcgattgtcaatgcgcgggt
ggggcgctagttcttgcggcggctgacgcgttggccgctcgttcgcccgcttgtagaccg
cttccgccacacgcaaagccatcggcgagacacgacgccctacatacgctacttcatgag
gagggtgaacagaaatgtccgcttcgtgccctagtagaacatgaaacgagcgcggccgtg
cggttagtagagcaatgctcccgggacccgcccttcgctggccccttagggaaacaaaat
cgccttagagtcgcacgcgccctgatttcctattcagtgcacatacaggagcctgataga
aaattagaaatcttgcaatttataacgggacaattgagcaacggatcacttccactagac
caggaactgatcgagaaagtaaaagatcttgcttgcagcataccgggagaaaaagccgag
cgcgcttggctcgacgtcctactacgactcagggcacaccgcgagcgtctactgcagcag
tatcgggacgctttgcccagaccgcggcttctctggaggatagacaccttactcaataaa
cacgagctcgccataaaagaattctttgacatcgaaaacccgtccgaacgggacgtcgac
gaactattcgagtacatccaatcacggatagaagtcgattcggcggcaaagagccaactg
cacgagtatcttcccgcgttgatcaaactgcggcccaacgccgccgcgagcctgctcacc
gacgaggccatggaatccctcgcacctgtcgtcaaacaattgacccctgagcgcactctc
gagttcggtaagtgcttgctggacatggaacgcctgacgggcgacgtcgccgccctctac
ttgcgatgcctctgcatcacccgacccaccgaagtcaaacaatttctgaccgctcacgcc
gggatcgtgcggcccgaggacgcgctctcactagtcaaagaattggggccgaaacacgcg
gagcccatgtgcctcgaggcggtaggggaccacgcgggagcgctcgacgcctcgctacgc
ctgatccgaaacgcccccgaggagcacaggcccgcgctggccgacgaggcgagcaagttg
tgcgtgaggatcgcccccacggtcccgcgtagcgtcgccgccgaaatgtggacccgcctc
gtgcgcagcgtagacgctctgccaccggccacgttgttcgaggcggtagcgtacatgccg
ctcaaggagttgctcgttaaatcgtgtaattccgcacaggtaaggagcatcctggcggac
ggagcgagcggccgggctatgtggcagtccgcggggaggatagcgggccgtgaagcgcac
gaggcgcttgcaagggcgctgagtgtagcgaggcgaggtctgagagttcagggtcgctgc
gtgcggtgcggcgaggctctggagacacgcgtaggcgtccggacggcgcattgctcgcgg
gccttccacgctgactgcgaagtgtccgctgtgtgcgagtgcgggcggcgccttccctcg
gccttgctcaccctcccgcccctcgccgtgcctcgcccccttcccccgcagcagttcaaa
ctacttcttgtggctcctccgcgacccgacttagaaggattagtgtag
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