Pieris rapae (cabbage white): 110992161
Help
Entry
110992161 CDS
T05162
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03018
RNA degradation
prap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110992161
09123 Folding, sorting and degradation
03018 RNA degradation
110992161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
110992161
03041 Spliceosome [BR:
prap03041
]
110992161
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110992161
mRNA degradation factors
5'-3' decay
Lsm complex
110992161
Spliceosome [BR:
prap03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110992161
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Hfq
LSM14
Motif
Other DBs
NCBI-GeneID:
110992161
NCBI-ProteinID:
XP_022113561
LinkDB
All DBs
Position
8:complement(6393423..6393892)
Genome browser
AA seq
95 aa
AA seq
DB search
MSQPLANPNTLLPLELVDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTP
EGRKITKLDQILLNGNNIAMLVPGGEMPGDSYEGQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaccgctagcaaatccgaatacattattgccacttgaacttgtggataaatgt
ataggatcaagaattcatattattatgaagaatgataaagaaatggttggaactctccaa
ggttttgatgactttgtcaacatgttactagatgacgtgacggaatatgaatctacacct
gaaggtagaaaaataacgaaactggaccaaatacttcttaatggaaataatatagctatg
ttggttcctggtggagaaatgcctggtgactcatatgaagggcaatga
DBGET
integrated database retrieval system
