Pieris rapae (cabbage white): 110992171
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Entry
110992171 CDS
T05162
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110992171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prap03009
]
110992171
Ribosome biogenesis [BR:
prap03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110992171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_Prp19
WD40
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_IFT140_1st
RMC1_N
WDR90_beta-prop_4th
Beta-prop_SCAP
RAB3GAP2_N
DUF3399
TFIIIC_delta
Motif
Other DBs
NCBI-GeneID:
110992171
NCBI-ProteinID:
XP_022113572
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All DBs
Position
8:complement(6768156..6774920)
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AA seq
699 aa
AA seq
DB search
METKVHRFRFYNPKPIPIQCVSYDKNNKLLALARKNGSIEIWDVNFAPFLIKCIPGGENS
SVEALAWVDDRLLSTGLGGALVEWDLENSCIKKSVMLTGYAAWCLDVDEAKTIVAVGTEQ
GYVNIYSVSNGDIVYKKLFDKQEGRILCCKFNKLGNTLVTGSINTIRMWDVNTGHATCRI
SCTRRGEEVIVWSIGILSDNTIVSGDSYGRLTIWDGTVGDQIETFVTHKADILTLVISDD
ENSLYCSGVDPVITMFKKVENTDIPSEYRWVKNIQRNIHEHDVRALAINKDRLISVGADG
YVTLSSYPPKKVMRIPPMLPMPRTAVSAVKKLLLLRFNNHLEIWKLGSYAVDNKGDVIIN
TGMKQQSEESNNEQLEKDTEIPFIKKQHYEEKQKTLQISEEPIKISSIQTKGKKDLVCCN
ISPNGELIVYSTESDVRMLKLDEDQGNISLQKLPVNELKCCDRVIFSEDSKLMIATKGTD
VYIMMVDADVGATLIQTISTKKHLKNGSVLHIALSKNQENGLYIAAADSKGEIAVWVKRA
KKFEYLLNLPKYSFVPSAMVIHNMMLIVTYVDQEVIQYDLEQQKLCKSKTDNVTFWRGRK
MAANDIIPHPARDALLFTDETALWVLDRQKISENYEPQAKRKQKGAHTSGVNIMPVKYLA
GFHWLGDNEAVIVETLPEQILMQLPPVLKKKTHNMVESK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggagacaaaagttcacagatttagattttacaaccctaagccaataccaattcaatgt
gtttcatatgataaaaataataaactcttagctttggcaagaaaaaatggaagtattgaa
atatgggatgttaattttgctccatttctaataaagtgtattcctggtggcgaaaattct
tcagttgaagctttggcttgggttgatgacaggttactttctactggccttgggggtgca
ttggtagaatgggatcttgaaaactcctgtataaagaaaagtgtaatgctaacaggatat
gcagcatggtgtctagatgtagatgaagctaaaacaattgttgcagttggtacagaacag
ggttatgtaaatatttattctgtcagcaatggtgatattgtatacaagaaattgtttgat
aagcaagaaggcagaattttatgttgcaaatttaataagcttggaaatacacttgttaca
ggatccataaacacaatacgcatgtgggatgttaacactggtcatgcaacatgccgcatt
tcttgtactcgaagaggtgaagaagttatagtatggagtattgggattttatctgataac
actatagtgtcaggtgacagctatggtcgtcttaccatttgggatggtactgttggagat
cagattgaaacttttgtaactcacaaggccgatattttgacattagtgatatccgatgat
gaaaattccctttactgcagtggagtcgatcctgttataactatgtttaagaaggttgaa
aatactgatattccatctgagtatcgctgggtgaaaaatatacaacgaaatatacatgaa
catgatgtcagagcacttgcaataaacaaggatagattaatatcagtaggtgctgatggg
tatgtcacattatctagttaccctccaaagaaggtaatgaggataccaccaatgctaccg
atgcctcgaacagctgtatcagctgtgaagaaattattattattaagattcaataatcat
cttgaaatatggaaacttggttcttatgctgtagacaataagggtgatgttataatcaat
actggaatgaaacaacaaagcgaagaaagcaataatgaacagttagaaaaagatacagaa
attccgtttataaaaaaacagcattatgaggaaaaacaaaaaacattacaaatttcagag
gaaccaattaaaatttcctcaatacaaacaaaaggaaagaaagatttagtttgttgtaat
atttcaccgaatggagaactgatagtttattctactgagagtgatgtcagaatgcttaaa
ttggatgaagaccagggcaacatatctctacagaagttacccgtaaacgagttgaagtgt
tgtgatcgagtgatattttcggaggactcaaaactgatgatcgcgacgaaaggcactgat
gtatacattatgatggtagatgcagatgtgggtgcgaccctgatacagaccatatctacg
aaaaagcacttgaaaaatggttctgttctgcacatcgccctttcaaagaatcaggaaaat
ggactatacattgctgcagcggattctaaaggcgaaattgccgtgtgggttaaacgtgcg
aaaaagtttgaatatcttcttaatttacccaagtattcgtttgtaccatctgctatggtc
atacacaatatgatgcttatcgtgacttatgtggatcaagaggtaatccaatacgatctc
gaacagcaaaagctgtgtaaatcgaaaactgacaatgtcacattttggcgcggacgcaaa
atggccgccaacgacataatccctcatccagcacgggatgctttattattcaccgatgag
accgctttatgggtgctggatagacagaagatatcagaaaattatgaaccccaagcaaaa
aggaaacaaaaaggtgcccacacgagtggagtaaatataatgccagttaagtatttggcc
gggttccattggctgggcgataatgaggctgtaattgttgagacattacctgagcaaatt
ttgatgcaattaccgcccgttttgaaaaagaaaacacacaatatggtggaatcaaaataa
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