KEGG   Pieris rapae (cabbage white): 110992350
Entry
110992350         CDS       T05162                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit Rpb4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03020  RNA polymerase
prap03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110992350
  09124 Replication and repair
   03420 Nucleotide excision repair
    110992350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prap03021]
    110992350
   03400 DNA repair and recombination proteins [BR:prap03400]
    110992350
Transcription machinery [BR:prap03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110992350
DNA repair and recombination proteins [BR:prap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110992350
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 110992350
NCBI-ProteinID: XP_022113814
LinkDB
Position
14:10027494..10028350
AA seq 138 aa
MSGPIQDVIEEDAADLQFPKEFENAETLLISEVDMLLEHRKAQNESAEEEQEFSEVFMKT
LTYTNMFKKFKNKETITAVRNLLQSKKLHKFEVASLANLCPETPEEAKALIPSLEGRFED
EELRILLDDIQTKRSIQY
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctggacccattcaagatgttattgaagaagatgccgctgacttacaatttcctaaa
gaattcgaaaacgctgaaacattgctcatatccgaagttgacatgctactagaacataga
aaagcacaaaatgaatctgctgaggaagaacaggaattttcagaagtgtttatgaaaacg
ctaacatatacaaatatgttcaagaagtttaaaaacaaagaaactataactgctgtaaga
aatttgttgcaatcaaagaaacttcacaaatttgaagttgctagtttagcaaatctctgt
cctgaaacaccagaagaagctaaggcacttataccatcattggaaggaaggtttgaagat
gaagagttaagaatattgctagatgatatacaaaccaagcgaagtatccaatattaa

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