Pieris rapae (cabbage white): 110992441
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Entry
110992441 CDS
T05162
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03022
Basal transcription factors
prap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110992441
09124 Replication and repair
03420 Nucleotide excision repair
110992441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prap03021
]
110992441
03400 DNA repair and recombination proteins [BR:
prap03400
]
110992441
Transcription machinery [BR:
prap03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110992441
DNA repair and recombination proteins [BR:
prap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110992441
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
110992441
NCBI-ProteinID:
XP_022113956
LinkDB
All DBs
Position
6:4879080..4886670
Genome browser
AA seq
562 aa
AA seq
DB search
MTTSSEDVLLSVNHVRYKKGDGTLYLMNQRLAWMLENRDTVAVSHKYADIKTQKISPAGK
PKVQLQVVLHDGTCSTFHFVNSAGAEAQAKDRDRVKMLLQNLLPKFKRQIDGELEMKSRL
LSLHPILKHLYEDLVISKVINSEEYWNTPTLKHYTESTNLKQEAGVSGAFLADIQPQTDG
CNGLKYNLTQDIIDAIFKTYPAVRKKHIDYVPNKMTEAEFWTKFFQSHYFHRDRIASSSS
KDLFGECAKMDDQAIASAMKHTTLDLTVDLPHFTESVPLLPDDEYTEKEKDSNSIHRSMI
KRFNQHSIMVLKASHKNSSSSNNKSTNNNKVENGIKEANGIDKRSTDESEPVDKKRRILE
KIKYEDLDDENDTNRAPELKLSKVERYLLGPSSQVTQSTSSSNNPPPLSALSSICQAWSN
GQQCLRPFRVSAAAAVGALGELSPGGALMRQHHAASMAQLIPSDIKLELHRIYYSGGELL
RELWRCFPQPGAGADTEDNAAKAEKFYEALLRFRNVKLRPFEEKMLRDLTPLATSLTRHM
NQMIDAACSKYALWQQRQAKLR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgactacctcgtcagaagatgtgttgcttagtgtaaaccatgtgcgttataaaaagggc
gatggaacactgtatctaatgaatcaaagactagcctggatgcttgagaatcgagacacg
gttgctgtatctcataaatatgctgatattaaaactcaaaaaatatctcctgctggtaaa
ccaaaagtgcaattacaagtggtattgcatgatggtacttgttcaacttttcattttgtt
aattctgctggcgcagaagcacaggctaaagacagggatcgagtcaagatgttgttacag
aatcttcttccaaaattcaagagacaaatagatggagaattagaaatgaaatctaggtta
ttatcattacatcctattttgaagcatttatatgaagacttagttatatcaaaagttatt
aatagtgaagaatactggaatacaccaacattaaagcactatacagaatcaactaatttg
aagcaagaagctggtgtatctggagcatttttagcagatattcagccacaaactgatggc
tgtaatggtcttaaatacaatcttacacaagatatcatagatgcaatatttaaaacatac
ccggctgtgagaaagaaacatatagattatgttcctaataaaatgactgaggccgagttt
tggactaagttttttcaatcacattattttcatagggatcgtatagcatcatcatcaagt
aaagatctgtttggagagtgtgccaaaatggatgatcaggcgatcgcgtccgcaatgaaa
cacactaccttagatctcacagttgatttaccacactttacagaatcagtaccgctgtta
cctgatgacgaatacacggaaaaagaaaaggacagtaattccattcatcgcagcatgata
aaacggtttaaccaacactcaattatggtgcttaaagctagtcacaagaattcaagcagt
agtaacaataaatcgacaaataacaacaaagttgaaaacggcattaaagaggcaaatggt
atagacaagcgatcaacggatgagagtgaacccgtagacaaaaaaaggaggatattagaa
aaaattaaatatgaagacttggacgatgagaatgacactaatcgtgcgccggagttgaag
ttgtctaaggtagaacggtatttattaggtccatcttcacaagtaacacaatctacttca
agtagcaataacccaccgccattgtcagccttgtcgtctatatgtcaggcgtggtcaaac
ggtcagcaatgcttgcgtccatttcgtgtaagtgctgcggcggcagtaggggctttggga
gaactcagccccggaggtgcacttatgaggcaacaccacgctgcatctatggctcagtta
ataccatcggacattaaattagagttacaccgaatatactactcgggaggggagttactc
cgggaactctggcgatgtttccctcaacccggcgccggcgcagatacagaggataatgcg
gcgaaggcagaaaaattctatgaagcgctactccgatttagaaacgtcaaattgcggccg
tttgaggaaaaaatgctccgggatctaacaccactagcgacatctttaacgcgacatatg
aaccaaatgatagacgcggcctgttccaaatacgccctttggcaacaaagacaagcgaaa
cttagatag
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