Pieris rapae (cabbage white): 110992764
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Entry
110992764 CDS
T05162
Name
(RefSeq) nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prap03036
]
110992764
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
110992764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
110992764
NCBI-ProteinID:
XP_022114410
LinkDB
All DBs
Position
7:2965090..2984162
Genome browser
AA seq
1956 aa
AA seq
DB search
MNERDIPSVPITTLAGVASLTDLLPVLPLPTPLPSTLNNKSQLFHPRVAEEAAILLATRD
DNLVSLLLQSLMQTSVQHIDLKDETIPNAVSPAPQQSTPELLKAILSVNPNVFDQQQRNH
WSNHLNTSKFNGMSPSPTFNYTSHNTVHSSPSSHGTAVHSAPIPNQQQLVAPPCQSSPHV
NMGSPPSQARPGSQVNIAAQNNISPPWSSANQSKTYTSPLTNTPNSQNGGFYNSLLQENR
SFETNITEDKDPLSDSPRNLPEQQQLTMQTQDKVFEQDGNVMTGQSPAQASVAPSPLRQE
PQVPQPSMGTPYAQDQARGSTTVNTRYPVVKIGRLSEGLLKKHDFTTERVRKNSTVETDS
DDNTPLKPLSKQKQNTQVLDKERQAIDMAREKNWEAVKRKHEEASKKEEAETAIVRPKLR
KVERRLVPVLEMLSVDELMETNTYQRFNKLIEAVFETIDEDVIITDEMEGPDIPQELLLP
RYQLQELCSEAAKLKTLGAMEAIPADRLLRLLNILEKNIRAAEKMSLIGDPEDSEEMRQI
WLESALERVMCASDACLTALYIMTSPSMPKRIFLEDVIDRIIMFIKFQLNNTIYCVYDPV
YSIQSTSKKKVDGRKRRGGGANQSNKRSAGNSTRAVRELYTHAHECVTLLGELFAAHQLT
DTTVLHASTVAVSPFFVENISELQLSALKLVTTIFTKYEQHRRLLLEDILASIARIPSSK
HNLRSFQLSSDQHIQMLTALVLQLVQCVVTLPETLCKSQDKNKEVEVESKKHVDKDLLII
SKYEAAISVGGTFLTSFLNKCRSRSEEVDFRPLFENFVHDLLTTVNKPEWPATELLLSLL
GTMLVKYMSDKSMEMPVRVASLEYLGLVASRLRRDSVQSRAKLSSMDAVIRDIRTEEEKD
GSQAHTPSSGLDEDEERTEFLQRVLLDYLAINGQKDQAWNCSRHFYITQWYRDMVIQPKA
SPTKKPKHKSKKRYKVLSSDEDSDADEDSERESKKQVTTAVMSAEKFKTIERRKTFFLEK
IRPFRYQGGTQVQVMQSYIDYSGAELISQYLASKRSFSQSFDKYLRKILVILCENTIAIR
TKAMKCLTMIVEADPSVLARPDMQIGVNRSFLDQSTAVREAAVDLVGKFVLSRPDLIDKY
YGMLSNRILDTGVSVRKRVIKILKDICIECPEFPKIPEICVKMIRRVNDEEGIRKLVMEV
FQNMWFTPCRNTARPGTLDLTTATADPLTRKVLNITDVVISSRDMGLEWFQQLLTSLFKP
KEDKDDSTKIIYQPPKSLLVACQQIVDCLIEHLLQLEETNTDGNSSSQRILACLSTLHLF
AKIRPQLLVNHALTLQPYLSLKCQNQYEQQIMSTVASTLELVVPLMEHPSEVFLAQLEED
AVKLILQRGQLVIASCIACLAAIVNNLTHNYKLIRDVFNQYHSILLQWKQGWQRNPDVTR
SLHSRPHFRRALFIVGLLLRYFDFTDGKVIDGLQNDIKEQVYSTLMYFVGLEDEDFVSHT
LKALGSVCVRHYEFMLRPELKEFYHHLLTSDLAPIEMKADVLRNIEMYLQEEEQRMIRQD
KEWSKNCKMENLKEMGDVSSGMASTVIQLYLKEILGSFLHPSTTVRSSAMKVVQLVLAQG
LVHPVQIVPYLISMSTDTEVTVSHTADKNLQEIDKKYPGFIHMKAQLGIKLSYQLQKILQ
AKNKGVIRGFRKKEQDDLPSALNGFLYSLLRNTRPQRRALVLSLLKQFDDASTAPLNQML
FLADNLSYFPYQVQDEPLFIIHHIDIIISTSGSNLLQLFREGLIKDETEEKEKEALDEED
EEEEAESLVCRMPEDARPLRDAMRQARGCLLLLVLKQHLKQLYGLTDAKINQYSPSENVK
VYEKAISRRHAPQFEPKATIAQLEQGDVDEELDERARRRIVDDYLEFKQLMLKFDPEEEE
EEEANAATSTAGAAAGAAAGSKSVPPPAAPPPVPPT
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagagggatattcccagtgtccctattacaactttagcaggagtagccagttta
actgacttgctaccagtgctacctcttccaactcctctaccatctacattgaacaacaaa
tctcagttatttcatccacgagttgcagaagaagctgctattctgcttgctacaagagat
gataatttagtttcattattattgcaatcattaatgcagacatcggttcagcatatagac
ttaaaggatgaaactataccaaatgctgtaagccctgctccacaacaatccactcctgag
ctcttgaaagcaattcttagtgtcaatcctaatgtatttgaccaacaacaaaggaatcat
tggagcaatcacttaaatacatcaaaatttaatggaatgtcaccatcaccaacctttaac
tacacatcacataatactgttcattcaagtccatcatcacatggcaccgcagtccactca
gcgccaattcctaatcagcagcagttggtagctccaccatgccagtcatcacctcatgtt
aatatgggatcaccaccatcacaggcaagaccaggaagtcaagtcaatattgctgctcaa
aataatatatctcccccttggagcagtgctaatcagtctaaaacatacacaagtccacta
acaaatacacctaattcacaaaacggtgggttctacaatagcttgctacaagaaaataga
agttttgagaccaatattactgaagacaaggatccactctctgattccccaagaaattta
ccagaacaacaacagcttactatgcaaactcaggacaaagtatttgaacaagatggaaat
gttatgactggacaatccccagctcaggctagcgtagcaccatcaccgctacgccaagaa
cctcaagtgcctcaaccctccatgggcactccttatgcacaagatcaggctagaggttct
actactgtaaatactagatatccagtggttaaaattggtcgtctgtctgagggcttgctg
aaaaaacatgattttaccactgagagggtacggaaaaatagcacagttgaaacagactca
gacgacaacacaccattaaaaccactatcaaagcaaaaacaaaacacacaagttctcgat
aaagagaggcaagctattgacatggctcgagaaaagaattgggaagctgttaaaagaaaa
catgaggaagctagtaaaaaggaggaggctgaaaccgctatcgttcgacccaagttacgg
aaggttgaaaggagattagtacctgtattagagatgttatctgttgatgaacttatggag
accaacacttatcaaagatttaataaactgatagaagcagtttttgaaacaattgatgaa
gatgttataataacagatgaaatggaaggtccagatataccacaagaactgttattgccg
cgataccaacttcaagagttatgttcagaagctgctaagttaaagacacttggtgctatg
gaagctattccagctgacagattgcttcggttacttaatatattggagaaaaacataagg
gctgctgaaaaaatgtcacttattggagatccggaggacagcgaagaaatgcgtcaaata
tggttagagtctgcgttagagagagtgatgtgtgcatcggacgcatgtctgacggcactc
tacataatgacctctccgagtatgcccaagcgcatattcctcgaggacgtcattgatagg
attataatgtttatcaaatttcaattaaacaacacgatttattgcgtgtacgatcctgtg
tatagcatccagtctacttcgaaaaagaaagtggatggtcgaaagcgtcggggtggtggg
gcgaatcagtcgaacaagcgtagcgcggggaattcaacgcgagcagtgcgggaactctac
acacatgcgcacgagtgtgtcacattgctcggcgaactgttcgccgcgcaccaactgact
gacacaactgtgttgcacgcctctactgtcgccgtatcgccgttcttcgtcgagaacatc
agcgaacttcagctctccgctctcaaacttgttactacgatattcacaaagtacgagcaa
cacaggcggttgcttctggaggatattctagcgtcaatagctcgtattccgagttcgaag
cacaatctacgttcgttccagcttagctcagatcagcacattcagatgctgacagcgctt
gtattacagttggtccaatgtgtggtcaccctacctgagactctgtgcaagtcacaggat
aagaataaagaggttgaggttgagagtaagaagcacgtagacaaagatctcctaataatt
tcaaagtacgaggcagctatcagtgtgggcggcacgttcctgacatcgttcttaaacaaa
tgccggagtcgctctgaggaagtggattttaggcctttgtttgagaattttgttcacgac
ttactgacaactgtaaataagccagagtggcccgctacggaattactactgagccttctt
gggacaatgcttgtaaaatatatgtcggataaatcaatggaaatgccagttcgtgtggca
tctctggaatatttgggtttggtggcgtcgagactgagaagggatagcgtgcaatcgcga
gcgaagctttccagtatggacgcagttatacgagatatacggaccgaggaagaaaaggac
ggcagtcaagctcatacaccctcatccggcctagacgaagacgaggaaaggacagagttc
ttacaaagagtacttcttgactatttagcaatcaacggacaaaaagatcaagcgtggaac
tgctccaggcatttttacatcacacaatggtatagagacatggtcattcagcccaaagca
tcgcctacgaaaaaacccaaacacaaatctaagaaacgatataaagttctcagcagtgat
gaagactctgatgcggacgaggacagcgaaagggagtccaagaaacaggtgacgactgct
gtaatgtccgcggagaagttcaaaacgatagagcgaaggaaaactttcttcttggagaaa
atccgaccttttcgatatcaaggtggaactcaggtccaagtgatgcagtcctacatagac
tacagtggggcggaacttatctcccagtacttggcttccaagcggtcgttctcgcagagt
ttcgacaagtaccttagaaaaatcctagtgatcctgtgtgaaaatacaatagctatccgg
acgaaagcaatgaagtgtttaacgatgatcgtggaggcggatccctctgtgctggcgagg
cctgatatgcagatcggtgtcaaccggtctttcctcgaccagtctactgcagtgcgggag
gcggccgttgacttggttggcaaattcgttctcagtcgaccggatcttatagacaagtac
tatggaatgctttctaacaggatattggacacgggtgtgtctgtcagaaaacgagtaata
aaaatcttaaaagatatatgtatagagtgtcccgagtttccgaaaatacccgagatttgt
gtaaaaatgattaggagagtgaacgacgaggagggtattcggaaattagttatggaggta
tttcaaaatatgtggtttacgccatgtcgtaatacagccagaccgggaacattagacctt
accacggccacagcagatcccctgactaggaaggtcttgaacatcactgatgttgtgatc
tcctcgagggatatgggcttggagtggttccaacagttattgactagtttatttaaacct
aaggaggacaaagacgattcaacgaagattatataccagccgcctaaatccctgcttgtt
gcgtgtcaacaaatagttgactgcctcatagaacatttactgcagttagaggaaacgaat
acggatggtaacagttcatcacagcgtattttagcgtgcctctcaacactacatttgttt
gcaaaaatacggccgcagttgctcgttaatcacgcacttacgttgcaaccatacttgagc
ttaaaatgtcagaaccaatacgagcagcaaataatgtcaacggtggcttcgaccctggag
ctggtagtgcctttaatggaacaccccagcgaagtgtttctggctcagctggaggaagac
gcagtgaaactgattctccagcgggggcagctagttatagcctcatgcatcgcctgctta
gcagccatcgttaacaatctaacgcacaactacaaactcatacgggacgtctttaaccaa
tatcacagtattcttctgcagtggaaacagggctggcaacggaatcccgacgtgacccgg
tcattgcactcgaggccccacttccgccgagcactgttcattgtgggccttctgttaaga
tactttgactttaccgatggcaaagttattgacggattacaaaatgacatcaaagaacaa
gtgtacagtacattaatgtatttcgttggccttgaagacgaagactttgtgtcacacacg
ttgaaagcgctcggctctgtgtgtgtcaggcattatgagttcatgttaaggccagaattg
aaggagttctatcaccatctccttacgtctgaccttgctcctattgagatgaaagcagat
gttctcagaaatattgagatgtacttacaagaggaagaacagcggatgatcagacaggat
aaggaatggtcaaaaaattgcaaaatggagaacctaaaggagatgggagatgtttcatct
ggtatggcatcgaccgtgatccagttgtacctgaaggaaattctcggctccttcctccac
cccagtactacagtgcgatccagtgccatgaaagtggttcagttggtgctcgcgcagggc
ctggtccatcccgttcagattgtcccctatttaatatcgatgagtacagatacagaagta
actgtgtcacatacagcggacaaaaaccttcaagagattgacaagaaatatccaggtttt
attcacatgaaggctcaacttggtatcaagctgtcttaccagttacagaagattttgcag
gcgaaaaacaaaggtgtcattagagggtttaggaaaaaggagcaagacgatctaccgtcc
gcgctgaatggttttttatattcattattacgaaatacgagaccgcagagacgggcactc
gtgttgtcgttactgaaacagttcgacgatgcttcgactgcaccactgaatcagatgttg
tttctggctgataacttaagttattttccatatcaagttcaagatgaacccctttttata
atacaccatatcgacattatcatttctacttcgggatccaatctcttgcagctttttcgt
gagggattaattaaggacgaaacagaggagaaagaaaaagaggcactggatgaagaagac
gaggaagaggaagccgagtcgctggtctgccggatgcctgaagatgccaggccgctaagg
gacgctatgagacaggcccggggctgcttattgctgctcgtgcttaagcagcacttaaag
cagttatacggcctcactgacgcaaaaataaatcagtattcgccatcggaaaatgtgaaa
gtatatgagaaggcaatatcgcggagacacgcgccgcaattcgagcccaaagcgacgatc
gcacagctcgaacaaggcgatgtcgatgaagaactcgatgaacgcgcgcgtcgtcgaatc
gtcgatgactacttagagtttaagcaactaatgttgaaattcgaccctgaagaagaggag
gaggaggaggccaatgcagcgacgagtacggccggagcggcagcgggggcagcagcgggc
agcaagagcgtacctccgcccgctgcgcccccgccggtcccgcccacatag
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