Pieris rapae (cabbage white): 110992930
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Entry
110992930 CDS
T05162
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03008
Ribosome biogenesis in eukaryotes
prap03013
Nucleocytoplasmic transport
prap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110992930
03015 mRNA surveillance pathway
110992930
03008 Ribosome biogenesis in eukaryotes
110992930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
110992930
03009 Ribosome biogenesis [BR:
prap03009
]
110992930
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110992930
mRNA cycle factors
Stress granule specific factors
110992930
Ribosome biogenesis [BR:
prap03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
110992930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
LRR_4
NTF2
LRR_8
Motif
Other DBs
NCBI-GeneID:
110992930
NCBI-ProteinID:
XP_022114624
LinkDB
All DBs
Position
6:complement(8999290..9007415)
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AA seq
626 aa
AA seq
DB search
MPKRGGGRPRNNWKNGAPNCFEHDDRIHHTGRRVMFKQNQNKGKNNKFKNWNDAKILFDD
DVDMGASGIAQNRRGAYRGRGGRLGSPPPRPSHHKKKFITGVLPWYQITIPYGAKHEKDV
ILKALLSHISPEVFIPHYFKIEGNSAIFYVDDVKVAEKLFHADRKITMPNGFKLVVIVRN
AVPRINITDDMKEKMKLAMAKRYNPTTKALDLTKFHADPDLVDVFCALFRPIIMLAAVDI
IAENIPDLEALNLNDNKLHGLEHLKILATKFKNLKILYMGDNRIPSVAPLEALKALPLVE
LYLKGNPLVNRFNDNETYKSEVRRKFPKLTRLDGDELPPPIGFDIPDDVSLPPAQQSFLV
DPNGQELIKEFLKQYFAIYDSESRQPLLDAYHESATCSLAASYLTTDSRSSNSTNKLNTY
MVNSRNLMRITDRDHRRRYLKTGKLQVVSLLSELPKTSHDLMGFAVDLVIFNPNMVVLTM
NGVFREIMTTGTPLRSFHRTFVIVPNNSGGFCILNDMYFITNTTKEQEDKAFSTSTPASV
PAPTPTPAVSAVPAIPAVTPAAQPVAGTSQEETQKMMLNMLSQQTGMNEHWSINCLQETG
WDYQRALFIFNQLQSEGKIPQEAFVK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgtggaggaggaagaccaagaaataattggaaaaacggtgctcctaattgc
ttcgaacatgacgaccgcattcaccatactggaaggcgagttatgttcaaacaaaatcag
aacaaaggaaaaaacaacaagtttaaaaattggaatgatgcaaaaatactttttgatgat
gatgttgatatgggagcatctggtattgcacaaaatagaagaggtgcttatagaggtcgg
ggaggtcgacttgggtcgccaccgccacggccatcccatcacaaaaagaaattcataaca
ggagttctgccatggtaccagataacaataccctatggagctaagcatgaaaaggatgtc
atattaaaagctctgctaagtcacatatcaccagaagtgtttataccacactacttcaag
attgaaggaaactcggcaatattctatgtggatgatgtgaaggttgctgaaaagttattt
catgcagatcgaaagataacaatgcctaatggtttcaagttggtggttattgttcgcaat
gcagtacccagaattaacattacagatgatatgaaagaaaaaatgaagttggctatggct
aaacgctataaccctacaacaaaggctctggatttaacaaaattccatgcagatcctgat
cttgtggatgtattctgtgcactttttcgtccaatcattatgttggctgctgtggatata
attgcagaaaatataccagatttggaagctttaaatttaaatgataataagctacatgga
cttgaacatttaaagatattagccacaaaatttaagaatttgaaaattttatatatgggt
gacaatcggataccatcagtggctccactagaagcgttaaaggctcttccgctagttgaa
ctttatcttaaagggaacccccttgtgaacaggttcaatgataatgaaacctacaaaagt
gaggtccggcgaaagtttccgaagctgacgcgattggacggcgatgaactcccaccacca
attggtttcgacataccggacgacgtatcactgccaccagcacaacaatcattccttgtt
gacccgaatggccaagagctcatcaaagaattcctaaagcaatattttgcgatatatgat
tcagaatcgcgacagccattactcgatgcttaccatgaatcggcgacttgttcgcttgca
gccagttatttgaccacggacagccggagcagtaattcgactaataagctcaacacatac
atggtgaacagtcgtaatcttatgagaataacagacagagatcacagacgaagatacctc
aaaacaggcaaattgcaagttgtatcgctgctctctgagttaccaaagacctcgcatgat
ttgatgggttttgctgttgatttagttatatttaatccgaacatggtagtactaacaatg
aatggagtattcagagaaataatgacgacgggaacacctctccgatccttccatcggaca
tttgtgatagttccgaataattcgggtggattctgtatacttaatgatatgtatttcata
acaaatactactaaagagcaggaagacaaagcgttttcaacatcaacaccagcttcagtc
cctgctccaactccaactcccgctgtttccgctgttcccgctattcccgctgtgacgcca
gcagcgcaacccgttgccggtacttcgcaagaagagacacagaagatgatgctgaacatg
ctcagccaacagactggcatgaacgaacattggagtataaattgtcttcaagaaacgggt
tgggattatcagcgggcattatttatttttaaccaactgcaatctgaaggaaaaataccc
caagaagcctttgtgaagtga
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