Pieris rapae (cabbage white): 110993039
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Entry
110993039 CDS
T05162
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04013
MAPK signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
110993039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prap03000
]
110993039
Transcription factors [BR:
prap03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110993039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
HAGH_C
Motif
Other DBs
NCBI-GeneID:
110993039
NCBI-ProteinID:
XP_022114800
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All DBs
Position
14:5590988..5626098
Genome browser
AA seq
1691 aa
AA seq
DB search
MQRAQTSGAGTQPPSSTRHYRAHSNYPDIDDQIPASVISSVGTVSLSQSSTNPTPNITMA
NPTTPNTNGAQPAQQTPTQAPIRNLPKKRKLAPSELEEIERNCMNSLPERNLNIQVSAPS
VEYTPTTYQPILQPSPIVQSSPHEIKQTEYISYPNIDLSEWRDHRVLAKQRGIYTPGVIR
QADGCKVIVELDGQENEAIEYGNVFGANKYDVISDASPQLSHISIGSSCVVRTDASRDSV
QNVFVEGYVFEIHNSPIRIRVQVIDGEGIKDTVEVKRADIRLLQPPWADELEDAGSHAAM
MPQHMRIHPVSTCVPYSMGGGEFVTSSPLAGAGQVVTVGALSNGSRPFDDYGESDDDLPR
EDIMFPTDASHMDCSNSKRSSLQSRGSTSSLIEGSLTPRSQPPTPRSQAATPHKYKKGDV
VSTPTGIRKKFNGKQWRRLCSKDGCTKESQRRGFCSRHLSLRGVPRSSNTPLAQGATHTP
QQRSSSKSLSSSGTGIEGDETSRESDTTPPNYRVAGRFDPDETEAANMLVSLGSSRSGSP
GASPVADNVFVPISSPQPPAAPPHHLIRPELVRPGRMSSPAGIATSVIRLSPAPTYHYQY
QERNGPIQSTQSNIISIQSSGINIPSSIQSNFTPPLNSTPNHSISISMNQSLSNMRKDEP
HNLVLQRSIPANGMDIDMYRGQHLRNGLHDIQYRREEMTSPGNHENFQNRRVSEYDDDDH
SVPQTDGHRADPRPIELSEARMDEKRIVKPAPLQARLVSLLDTDSRDSVKRYYVIPQNSI
EKKIVLIKNEPTETVQIDHKAHQLAMPLNEPESETRGLDNGDHVNNVNSSAVIVHPSQLL
PVLPAPNPHTAIIVSTSGVNGSVFPWQSLVPLLRAASPPAAAPAQPPSPRTPRTPHTPHT
PHTPHTPHIKSEEIKAETNVTDTVTSMCTDEDDEVFECEDNTTNCGDNTNNRRTQSLSSL
SQPGGPEKKERRIRRPMNAFMIFSKRHRQVVHQLHPNQDNRTVSKILGEWWYALKPDEKQ
KYNELASEVKEAHFKAHPEWKWCNKDRRKSSSSRDPTGSMPQSPRTPSDVMASGLPTSGT
EITMNTNSYTHIASPQLSDDEPMATQNIEEPPQASGNEMDLKCGEKVNDSDSEGVEAREY
LTHHDHTRRPKAIKARAGSSDNLLGITASSPGGSKVFQPTGGAFKSTHADSGDNHRQWTA
FTAVKSTLPVPSSPHTSTQNITNSVQGISLNAPNISTQTALDNAIASIINSPSASSGVQV
ISTGMSNPTMSTSALNNALLKSVTLVNRNFNDNKPTGPITLSVDASGNLFIKTSQPSEPA
NEPNRLHYVQLQRLYVPSFTTEVESNQNQTQTQTVQSAPPTVIVSQSNNNVNNNNVNNNA
PQSKPTEWDNVEETRPFPLAPTPAQLGRAPLQKRLSRGTSTGSTGSGDQSVPRSDSNSTP
FDTPELIQSPKKLENLPSPLLKKTLFKKGNEDGRDKVLETVNFEAKFSTLPQFKPDACSP
SGMVVPRSPQLYLRKKHKIDDETTVVTPQIEAEVLNGNGIPTPHSYGTPHTTTKLVGNTF
FGPDFNIDTFRVSESMEEMSPRTPCSAPGSAACSGARGEAGHRRVLEQRRHLVLKLFQEH
GMFPTTQATTSFQAAHTDIFPTKMSLQLKIREVRQKLMAQSNLTPHSDVNTPTNINSPLV
SSTLQPTSTAS
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcgctcagacgagcggcgcgggcacgcagccgcctagctccacgcggcattac
cgcgcgcactcgaattaccctgatatagacgatcagattccagcatcggtgattagtagc
gtgggaacagtgagtttgtcacagtcaagtacgaatccaaccccaaatattacaatggcc
aatccgactactccaaatactaacggtgcgcaacctgctcaacaaactccaacgcaggca
ccgatccgcaatttgcctaagaaacgcaaattggcgccctctgaactagaggagatagag
aggaattgtatgaacagccttcctgaaaggaatctaaacatccaagtgtcagccccgtca
gtggaatacacgccaacgacgtatcagcctattctccaaccttcaccaatcgtgcaatct
tcaccgcacgagataaaacagacggaatacatctcatatccaaacatagacttatccgag
tggcgggatcacagagtcttagcgaaacagcgcggtatttacacgccgggtgtcattcga
caggcagacggttgtaaggtgatagtggaattggatggacaggaaaatgaagcgattgaa
tatggtaatgtgtttggtgcaaataagtatgacgttatcagtgatgcgagtccacaattg
agtcacatatctattgggtcctcgtgtgtcgttaggactgatgctagtcgggacagtgtt
caaaacgtgtttgtggaaggttacgtgttcgaaatacataattcgcctatcaggattcgt
gtacaggtcattgacggtgaaggcataaaggacacggttgaagtgaaaagagcggatatc
cgtctcctgcagcctccctgggctgacgagttagaagacgctggttcgcacgcagccatg
atgccccagcatatgcggatacatcccgtttctacgtgtgtaccgtactccatgggcggt
ggggagtttgtgacgtcatcgcctttagctggggcagggcaagtggtgacagttggtgcc
ctctcaaatggttccaggccatttgatgattatggagaaagtgatgatgacttgccaagg
gaggatatcatgtttccaactgatgcctcacatatggattgcagcaatagtaaacgcagc
agtctccaaagccgaggaagtacatcgagtctcattgaagggagtcttactccgcgatct
caaccgcctacgcccagatctcaggcagcaacgccacacaagtacaagaaaggcgatgtt
gtgtccacaccaactggtattcgtaagaagtttaacgggaagcagtggaggcggctttgt
tcaaaggacggctgcacaaaggagagtcagcgccgcggcttttgctcccgccatctatca
ttgcgaggtgtacctaggtcctccaatacgccgcttgcgcagggagcaactcatacgccc
caacagagaagcagcagtaaatcattatcgtcaagtggtaccgggatcgaaggggatgaa
acttcccgtgagtcagacacaactccacctaactatcgggttgcggggcggtttgacccc
gacgaaaccgaggctgccaatatgctggtttccctgggcagctctcgctccggtagtccg
ggagcgtccccagtagccgataacgttttcgtcccgatttcctcgccacaaccgcctgca
gcgccgccacaccaccttatacggcccgagttggtgcgtccaggtagaatgagttcgcca
gccggtattgctactagtgttatcagactatctcctgcccctacttaccattatcaatat
caggagcggaacgggccgatccaatccactcaatcaaatatcataagtatacagtcatcc
ggtatcaacatacccagcagtatacaatcaaacttcacaccgcccctgaattcgaccccg
aatcactctatctccattagtatgaaccaaagtttgtcaaacatgagaaaagatgaacct
cacaatttggtattgcaaagaagtattccggcaaatggcatggatatagacatgtatcgg
ggtcaacatttgaggaatggattgcatgatattcagtatcggcgcgaagagatgacgtca
ccgggtaaccatgaaaattttcagaatagacgagtctcggagtatgacgacgacgaccac
tccgtcccacaaacggatggtcaccgtgctgacccacgtcccatagaactctccgaggct
cgaatggacgagaagagaattgtcaaaccggcccctttacaggcgcgtctcgtgtccctt
ttggacacagattcaagggattcggtgaaacgatactacgtgataccgcaaaatagtatc
gagaagaagatcgtgctgattaagaacgagccaacggaaactgtgcaaatagatcacaaa
gctcatcagctagcaatgccgcttaacgaacccgaatccgaaacaagaggattagacaat
ggcgaccatgtaaataatgtgaatagtagtgcagttatcgtccaccccagtcagctgtta
cccgtattaccagctcctaatcctcacacagctatcattgtatccacaagcggggtcaat
ggcagcgtgtttccctggcagtccctagtgcccttactgcgtgccgcgtctccgcctgcc
gcggcgcccgctcaacccccttcgcctaggacaccccgcaccccgcatacaccacatacc
ccacatacaccgcacacgccgcatattaagagtgaggaaatcaaggctgagactaacgtt
acagataccgtaacatcgatgtgtacagatgaagacgatgaagtatttgaatgtgaagac
aatactacgaattgtggggataataccaataatcgccgaacgcagagcctttcttctctc
agtcagcctggagggccagaaaagaaggaacgtcgcatccgccgtccaatgaacgcgttt
atgatattctctaaacggcatcgccaggtggtccatcaattgcatcccaatcaggacaat
cgtactgttagcaagattttgggagaatggtggtatgctctcaaacctgatgagaagcaa
aagtataatgaactcgctagtgaggtcaaggaagcacatttcaaagcacaccctgaatgg
aagtggtgtaataaagatcgtcgtaaatcttcaagcagtagggatcccacgggatctatg
ccacagagtcctcgaacgccgtctgatgttatggccagtggattgccgactagtggaact
gaaattactatgaatactaactcatacactcacatcgcttcacctcaacttagtgatgat
gaacctatggcaacccagaatatagaagagccaccacaagccagtggaaatgagatggac
ctgaagtgcggagagaaagtcaacgattcagactctgagggcgtcgaggcgagagaatat
ttgacgcatcatgaccacacaaggcggcctaaggctatcaaagctagagctggttcatct
gacaatctactgggtataacagcttcgagtcctggcgggtccaaggtatttcagcctacg
ggaggtgcatttaagtctacacatgctgatagtggagataaccacagacaatggacagca
ttcacagccgtaaaatccactctaccagtgccaagttcgcctcacacaagcacacagaac
atcaccaacagtgttcaagggatttctcttaacgcacccaatatatcgacacaaacagca
ctagataatgcaatagcgtcgataattaacagtccatcggccagtagtggtgtgcaagta
atatcgactggaatgtctaatccaacgatgtcgacaagtgccttgaataacgcactattg
aagagtgtcacgctggttaatcggaatttcaatgataataaacctacaggaccaattacg
ctctcggtggatgcatcaggcaacttgtttataaagacgagccaacccagtgagccagcc
aatgagccaaatagacttcactatgtgcagttacaacggctttacgtaccttcattcact
actgaagttgaatcaaatcagaatcagacgcaaacccaaacagtccagagtgctcctcca
actgttatagtgtcacagagcaataacaacgttaataataacaatgtgaacaacaacgca
ccacagagcaaaccaactgaatgggataatgtggaggaaactcgccctttccctctcgca
cctactccagcgcaattgggacgcgcgccgttacaaaagcggctcagtcgaggtacttca
acgggttcgacaggtagcggcgaccagagtgtaccgcgatcagacagtaactccacccct
tttgacactccagagttgatacaatcgcccaagaaactcgagaaccttccaagcccgtta
ctgaagaaaactctgtttaagaaaggcaatgaggatggaagggataaggttctagagaca
gttaactttgaagccaagttcagtacgttaccacagttcaaacccgacgcctgcagtccc
agtggtatggttgtaccgcgaagtccgcagctatatctcagaaagaaacataaaattgat
gacgagacaaccgttgtgacgcctcaaatagaagcagaggttcttaacggaaatggtatc
ccgaccccccattcgtacggcactccacacaccaccactaaactagtgggaaacactttc
ttcgggcccgactttaacattgacacttttagagtgtcagagagcatggaagaaatgtct
ccccgtacaccatgttcggcacctggatctgctgcgtgttcgggtgcgagaggagaagct
ggacacagaagagtattggaacagaggcgacatctagtgctcaaactgtttcaggaacac
ggcatgttcccaactacgcaggccactactagttttcaggcggcccacacagacatattc
ccgaccaagatgtccttgcagttaaagattcgcgaggtgcgacagaaactgatggcccag
tcaaaccttactccgcactcggacgtcaacacgcctactaacataaactctccgctcgta
tccagcactctgcagccgacgtcaaccgccagttag
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