Pieris rapae (cabbage white): 110993103
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Entry
110993103 CDS
T05162
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110993103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prap03021
]
110993103
03036 Chromosome and associated proteins [BR:
prap03036
]
110993103
Transcription machinery [BR:
prap03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110993103
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110993103
PBAF complex
110993103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
GCN5L1
Ogg-HhH
Motif
Other DBs
NCBI-GeneID:
110993103
NCBI-ProteinID:
XP_022114898
LinkDB
All DBs
Position
16:complement(8457954..8467149)
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AA seq
557 aa
AA seq
DB search
MATPNSYKQNASMSMPSPQNNPHYMIAGAPMSFSMMKGGMNAPPHHNQYQYHPQYQGGPM
GHPGYGWQPQRFGAESARRATSGSSQAAQSGKDDKTSPFVSTVHSHPGFQPQKIGKGLGG
SAGLPKPPKPPEKPLMPYMRYSRRVWDTVKAANPDLKLWEIGRIIGGMWRDLPQTEKYAF
VDEYEAEKSEYEKTLKAYHNSPTYLAYIAAKNKAVVGALEEESSSKKGSSQKEQQQDRRI
DIQPAEDEEDQDEGLSVKHVSYARYLRNHRLINEIFSDTVVPDVRSVVTTARMQILKKQV
QSLTMHQKKLEDELQQIEEKFEAKKRKFIESSEAFQEELKKHCKPAVDEETFTRMVERAL
EQMRRGVNPAHTTVRERKDEPANEPSQQPIKTETNGPNAPTQVDKVSTSEVKMDENMTTE
LQKPENKEAIPDSTPGHENEGERKEEKPHEMKMETKDAPAHPPPQAHIAPPNAGMMMPPN
PNAPAHQPPHGGPPPPPGGYGGAYGGRYYPGYAGGYPAGYPHYYPPGPEHYPPHHAHPHP
HHEIKPAEEPPAKKENE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacccaacagttataaacaaaacgcatcaatgtcgatgccaagtcctcaaaac
aacccgcactacatgattgcgggggcaccaatgagtttcagtatgatgaaaggcggtatg
aatgcaccgcctcaccataaccaataccagtaccacccacaataccagggtgggccaatg
ggccacccggggtacgggtggcaaccacagcgttttggtgcagagagtgcaaggcgggcc
acgtcagggtcaagccaagcggcccaaagtggaaaagatgataaaactagtccatttgta
tctactgttcattctcatcctggattccaaccacaaaaaattgggaaggggcttggtggg
agtgctggtttaccaaagcccccaaaaccgccagaaaagccacttatgccatacatgagg
tactcccgcagagtatgggacacggtaaaagcagcaaaccctgatctaaaattatgggag
ataggacgtattattggtggaatgtggagagacttacctcaaactgagaagtatgccttt
gtcgatgaatatgaagctgagaagtcggagtacgagaaaactttgaaggcatatcacaat
tcaccgacctatcttgcatacattgctgccaagaacaaagctgtcgttggagccttggaa
gaagaaagctcaagtaaaaaaggcagctcacaaaaagaacaacagcaggacagaagaatt
gacattcagcctgctgaagatgaagaagatcaagacgaaggtctgtctgtgaagcacgtg
tcgtacgcgcgttatttgagaaaccaccgcctcatcaacgagatattctccgatacagtt
gtaccagatgtgagatctgttgttactaccgcaaggatgcagattctgaaaaaacaagtt
caatcgctcacaatgcatcagaagaaactggaagacgagttgcaacagattgaggagaag
tttgaagccaaaaaacgcaagtttattgagagcagcgaggctttccaggaggaacttaag
aagcattgcaaaccagcagttgatgaagagactttcactcgaatggtcgagagagcccta
gagcagatgagacgtggagtcaatccagctcatactactgtcagagagagaaaggatgag
cctgccaatgaaccgagtcaacagccgataaaaacagaaacaaatggaccaaatgcgcca
acgcaagttgacaaagtctccaccagtgaagtgaagatggacgagaatatgaccacagag
ctgcaaaaaccggaaaataaagaggcaataccggatagtacaccgggacacgagaatgag
ggtgagcgcaaagaagagaagccccatgaaatgaagatggaaactaaagatgcgcctgcg
catccgccacctcaagcgcatatagccccgcccaatgcaggtatgatgatgccaccaaac
cctaatgcgcctgcgcatcagccacctcatggaggtccacctccgccaccaggtggctac
ggtggtgcatatggtggacgatattacccggggtacgcgggtggatacccggccggatat
ccgcattattacccacccggaccggaacattacccgccgcaccacgcgcatccgcatcct
catcatgagatcaagccggctgaagagccacccgccaagaaggagaatgaatga
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