Pieris rapae (cabbage white): 110993151
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Entry
110993151 CDS
T05162
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110993151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prap03400
]
110993151
DNA repair and recombination proteins [BR:
prap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110993151
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
110993151
NCBI-ProteinID:
XP_022114974
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Position
3:complement(6985273..7006948)
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AA seq
912 aa
AA seq
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MSSLQPIQALNLDSVKQQAFVKYFNSLPEKPPTTVRIFDRNDYYSVHGADATTAAREVFS
SVSNIKKMGIEPNRQDYLVLSKGNFDILIRKLLLVRRYRVEIYVSESSKNEWVLKYKGSP
GCMTQLEEVLGEGFTNENGCLIAINIKTDAITKGRLIGVACVSGNDYQMSVSEFTDDDLL
TQLETVTVQMAPTECIIPQAENADYKALNTVMERANITVTRLKKIDFSTEGLIQDLNRLL
KFKDSQVQDANAFPETRMASAMLSLAAAIRYASLVNDATNFGRFHLNSIKAECFLHLDAA
ALSALNVLPELGDSNHAPTRSLFGLLDRCRTQQGKRLLAQWLRQPLRDINLINERLDIVE
LLVENSQLRLQLHEDHLRRIPDLQALARKLTRKKANLHDCYRIYQAIQRLPNLLQCLSES
NSPTVHSSLAEPIAELNDDLEKFQQMIEATVDMDAADRGDFLVKPSFDEQLQLLHEQLEN
IQLSAEKELKKAARDLEMDAKKTIKLENNPQNGFYFRVTLKEEQALRGNKKYTIIDAVKG
GVRFKTNALDDITEDYVQSKMNYEKEQDKMVAEIIGIAAGYSECLFSLSHILSKLDVLVS
FAVAASTAPYPYTRPTITESLDEFVLRDVRHPCLEVQEGVSFIPNDVVFKRGSCLMHIVT
GANMGGKSTWMRSCGIVALLAHAGCLVPASSATVPKLRALCARVGAADREEKGQSTFMLE
MIESAAILRTATPDSLVLVDELGRGTSTYEGCGIAWAIAEKLATESKCFCLFATHYHELT
RLPSLHPNVIVNSHAEASVVDSQLLLLHKIVPGPATHSLGLHVAKLADLPESIIEYAEAK
QAQLETNLFEIEASVKTQDTLEGQQLIEEFLRKCKKIQETVKSDADMMLEINKMKEDLLR
SDSKYIKSLLAA
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacttcaacccattcaagccctaaacctagactcggtcaagcagcaagccttt
gttaaatactttaattcattacctgagaaacctcccacaaccgtaagaatctttgatcgc
aatgactactacagtgtccatggtgcggatgcaaccaccgctgcgagggaggtattttca
tcagtatccaacatcaagaagatgggcattgaacctaatcgccaagattatctcgtcctc
tcgaaagggaactttgatatattgattcggaagttattattggtccgtcgttaccgcgtt
gagatctacgtatctgaatcaagtaagaacgaatgggtcctcaagtacaaaggatcgcca
ggatgcatgactcaactagaggaggtgttaggtgaaggattcactaatgaaaatggttgc
ttaattgcgatcaatattaagactgatgctatcactaagggtcgcctcataggagtggcg
tgcgtatcaggtaatgactaccaaatgtccgtctcggagttcaccgatgacgatttgctg
acacaattggaaactgttaccgtgcagatggcgcccacggaatgtattataccgcaagcg
gaaaacgctgattacaaagcgctgaatacagtaatggaacgagccaatataacagtgaca
aggttgaaaaaaatcgatttttcaactgaaggtctgatacaggatctaaatcgtcttcta
aagttcaaggattctcaagtacaagatgctaatgcctttcccgaaacaagaatggcatct
gccatgttgagcttagccgcagctataagatatgcttcgctcgttaacgatgctactaat
tttggaagatttcacctgaattcaataaaagcagagtgcttcctgcatttggacgcggcg
gcgctcagcgcgttgaatgtgttaccggagcttggagactccaatcatgcgcctacgaga
agtttgtttggattactcgatagatgtcgcacccaacaagggaaacggctattagcccaa
tggctccgtcagcctctcagagatataaaccttattaatgagcggttagatattgtagaa
ttgttagttgagaactcacagttgagactacagttgcatgaagatcatttgcgaaggatt
ccggatttgcaggccttagccaggaaacttacaaggaaaaaggcaaatttacatgactgt
tataggatatatcaggcaattcaaagactgccgaatttactccaatgtttgtcagaatcc
aacagtccaactgttcattcttcactggccgaaccgattgccgagttgaatgacgattta
gaaaagttccagcagatgatagaggctactgtcgacatggatgctgcggacagaggcgat
ttcctagtaaagccatcctttgacgagcaacttcaattacttcatgagcagttggagaat
attcagttgtccgccgaaaaagaattgaagaaggctgccagagacctagaaatggacgcc
aaaaagactattaaacttgaaaataatccacaaaatgggttttactttagggtaacacta
aaagaggaacaagctttacgtggaaacaaaaaatacactataatagacgctgtcaagggt
ggagtaagattcaaaactaacgcattagatgacataacagaagactatgtacaaagtaaa
atgaactatgaaaaggaacaggataaaatggtagcagagattattggtatcgctgctggt
tattcggaatgtctcttcagtctctctcatattttatcaaaactggatgtgcttgtctct
ttcgctgttgcggcttcaactgccccatatccatacactagaccaaccattacggaaagc
ttggatgagttcgtcctacgagatgtgagacatccatgtcttgaagtgcaagaaggcgtc
tctttcataccgaatgatgttgtttttaaacgaggttcgtgtttaatgcacatagtgaca
ggcgccaatatgggcggcaagtccacgtggatgcggtcctgtggcattgtggcgctactt
gcacacgcgggctgtttggtcccggcctctagtgctacggtgccgaaacttagggccctt
tgtgcgagagtgggagcggctgatagagaggaaaagggacagagcacttttatgttggag
atgatcgagtcggctgctattttaaggacggcaactccggactcactagtactagtagat
gaacttgggcgtggcacatcgacttacgagggatgcggcatcgcctgggctattgctgag
aaactagcgacagaaagcaaatgtttctgcctcttcgcgacacattatcacgagttgact
cgattgccgagtctccatccgaatgtaattgtgaattcacatgcagaagcctccgtggtg
gactcccaattgctacttctgcataaaatcgtccctggacctgcaacgcattctctagga
ttgcatgtcgccaaattggccgatttaccggaatccattattgagtatgcagaagccaaa
caggcccaactcgaaacaaatttatttgaaatcgaggcttcggttaaaactcaagacact
ttggagggacagcagttaatcgaagaatttctacgaaaatgcaagaaaatacaagaaact
gtcaaatctgacgcagacatgatgttggaaattaataagatgaaagaagatttacttcgt
tctgacagcaaatacataaaatctttacttgctgcgtaa
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