Pieris rapae (cabbage white): 110993246
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Entry
110993246 CDS
T05162
Name
(RefSeq) structure-specific endonuclease subunit SLX1 homolog
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110993246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prap03400
]
110993246
DNA repair and recombination proteins [BR:
prap03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110993246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
SLX1_C
T5orf172
zf-RING-like
FANCL_C
HMBD
zf-RING_2
PHD
C1_2
Motif
Other DBs
NCBI-GeneID:
110993246
NCBI-ProteinID:
XP_022115117
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Position
3:complement(6073864..6075893)
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AA seq
276 aa
AA seq
DB search
MSSPEIVDDFYGVYLLYNINPKYKGRTYIGYTRDPLRRIMQHNRGTWAGGAHRTNNKGPW
KMVLIVHGFPNNISALRFEWAWQNPTKTIRLQHLDLKKLPRKETEVQFKIRVLSEMLRVG
PWYRLPLTIQWLEHDFYKEFPPERKPPDHIITSFGPVKSRNLKVSQVLSTSKVCQICFEY
IYDNKELKCVNEKCNLSAHLACLADLFLSPGEYVPIEGSCPKCKMILKWGVLIRKMKGCN
YVEDTESEVVDEEEISQDKMFVDNNSWFLDCDDDLL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgccagaaatagttgacgatttttatggggtgtatttattgtacaacataaat
cctaagtacaaagggcgaacctacattggatatacaagggatccgctaagaagaattatg
cagcataatagaggtacttgggcaggtggagctcaccggacaaataataaaggcccttgg
aaaatggtgttaatagttcatgggtttccaaataacatttctgcattaaggtttgaatgg
gcatggcagaatccaactaaaacaataagattgcaacatttagatcttaaaaaattacct
agaaaggagactgaggtacaatttaaaatcagggttttatcagaaatgttgagagtgggc
ccatggtatcgtctacctttaaccattcaatggctggaacatgacttttacaaagagttt
cctccagaacgaaaaccgccagaccatattataaccagttttggtccagtcaaaagcaga
aatctcaaagtctcccaagttctttcaacatccaaagtttgtcagatttgtttcgaatat
atttacgataataaggaacttaaatgtgtcaacgaaaaatgtaatttatcagcccattta
gcttgtttagccgatttgtttttgtctccgggtgaatatgttccaattgaaggttcttgt
ccaaaatgtaaaatgattttaaaatggggtgttttgatacgaaaaatgaaaggatgcaat
tatgttgaagatacggagtcagaagtggtcgacgaagaagagatttcgcaagataaaatg
tttgttgataataattcgtggtttcttgattgtgatgatgatttattatga
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