Pieris rapae (cabbage white): 110993357
Help
Entry
110993357 CDS
T05162
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13191
RNA-binding protein 16
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prap03021
]
110993357
03041 Spliceosome [BR:
prap03041
]
110993357
Transcription machinery [BR:
prap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110993357
Spliceosome [BR:
prap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110993357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110993357
NCBI-ProteinID:
XP_022115269
LinkDB
All DBs
Position
3:complement(7142443..7159033)
Genome browser
AA seq
1514 aa
AA seq
DB search
MDKSEVKAFNAELSGLYENKPPISKAKMSAITRGAIKAIKFYKHVVHSVEKFIQKCKPEY
KVPGLYVIDSIVRQSRHQFGQDKDVFAPRFAKNMQQTFANLFRCPPEDKRNIIRVLNLWQ
KNNVFGSDVIQPLLDMADPNHPLHQEIQQQQNNAANGSSLNNTHNVSDNKISPGPASQHT
PHGSSPMGGDQFQDDSSGPPPAKFNRKLLNDFEYESGDDTPMAESTPPQHNPPHSNTQNN
VQHIQHMQNIQPPHQSHNPADALGSILTNPEIMRQLQSLQAQMQLVAGMQNIPNLMPMMT
DMQMQQNPNASLPFLNSHNEQSMMPEGKDDMANESDIEFVDSGPQVIEIPDANDSRSPSP
KSRRRSRSPRRRRRSRSRSRSPRRRRDRDRERDRDRDKDKEKSHKEREAEKEKQREREKK
GLPPIKKENLSVCSTTLWVGHLSKLATQEELSDLFGAFGGLVSVDLVPPRGCAFVVMERR
RDAARAKQKLDRHKLHSKEITVAWAAGKGVKGREWKDYWEAELGVAYLPWSALHARWVLG
ALSLDALEEGGAVDEETLPPWLPPRILPKTMPDIPMIPGLTPVSGPGMLIPGPGMPGPGP
MPGMPNLANMPNMPNMANMANMPPTSMAMGGPPPASIPLPVPRMPPPGMGPGLPAGMPPG
MRPPMPAPLPGVQGEGSLLGFPPSLPPHTLPQPGMVGSFLGGLMGMGVGGLMLPLHAHAH
AQLNAQPPQHTQPPMQLQQQQQQSEVTGADDAMELDTEDHLDQTDNHIDATPSNMLPDQL
QALMSKPPPAFNSFEPPPGFNPEGFDASQPPPDDKRDEERRERDRRDRDRDRDRRGDRDR
RDGRDVRERDRRDRREGDRRGDGRDREGNRERDDRRDRDRDRGRDRRDRDRDRDRERDRF
NSRENNAERIRDKSPRNEQNEKSLQERLWEMANGKPEKGDERNMEEPGDESAQSDIPPLP
DRPENHQPDKGSESTEDNEGGWTQVPPPRQMAPGFRAELRMRGPPLRPPNRGSWMEQGPG
GPGGPGPFGPRFSMGPPFNRPPFEGPGPMFERPPFNRMSFDNRPPFDGPRPPFDGMRPPF
DGPRPPFDGPRPPFDGPRPPFDGPRPHFDGPNSRPPFDGPRPHGPRPPFDGPRPPFDGPR
PSFDGPRPPFDGPRPPFDGPRPPFDGPRPPFDGPRPPFDGPRPHFDGPGPRPPFSGSRPP
FDGPRPSFDGHRQYDSFDGERPFDGPTEYRNRRFDDREQFDRNWNRERDREWDRDRRNEW
DDRRRDRRSGGNVEHEDRFRNDRRRNNDDRGRPRDEKPKEDKPLKDDKSTKEDRSSRRDK
DRKSRWGAAEETSQPVEEQRTNDQIDNQNESVVETSLSEHLADRNFSNENKLEEVIENNV
TNEESSLENNASEPFNSEVPDTQESHVNRSDDEYENKEDSYNGNNKIIEEEKQSNVAPSL
YDASDDVQPVFSVAKEENEVQNDREAISENNDREIISEKNENSDDIINEKCVQEIEANEP
LEKPETKECKGGND
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggataagtcagaagtaaaagcgttcaacgcggagttatccgggttgtacgaaaacaag
cccccaatttcaaaagcgaagatgagtgctataacaagaggtgctataaaggcgataaag
ttttacaagcatgttgtacatagtgttgaaaagtttatacaaaaatgcaaaccagaatac
aaagttccggggctttatgtgatagattcgattgtgagacagtcaagacaccaattcggc
caggacaaggatgtgtttgctccgaggtttgctaaaaatatgcaacaaacctttgctaat
ctcttcagatgccctcctgaagataagcggaatataataagagtactgaacttatggcag
aagaataatgtgtttggttctgatgttattcagcccctattggatatggctgaccctaat
catcctctacatcaggaaattcaacaacagcaaaacaatgctgccaatgggagttcatta
aataatacacacaatgtctctgacaataaaatatctccaggccctgcatcgcagcatact
ccacatggatcatcaccaatgggaggggatcagttccaggatgactcatctggaccaccg
ccggcaaagttcaatagaaaattgctgaatgattttgaatatgagagcggggatgacaca
cctatggcagaatctactccaccccaacacaacccaccacactccaatacccagaataat
gtacagcatatccaacatatgcagaatattcagcctccacatcaaagtcataatccagct
gatgcgttaggaagtatcttaacaaaccctgaaattatgaggcaactgcagagtttgcaa
gctcagatgcagttagtagctgggatgcaaaatatacctaatttaatgccaatgatgaca
gacatgcagatgcaacaaaatccgaatgcatcacttcctttcctcaattcacataatgaa
caatcaatgatgccagagggcaaggacgacatggcaaatgaatcagacatagagtttgta
gattctggtccacaagtcattgaaataccagatgctaatgattctagaagtccgtcgcca
aagtctcgtcggcggtcacggtcgcctcgcagacggagacgatctcgatcgcgctctcgc
tcgccgaggcgacggcgggacagagatcgagaaagggatagagatagagacaaggataag
gagaaaagccacaaagaacgggaagcagagaaagaaaaacagagagagagagagaaaaag
ggtttacctccaattaaaaaagaaaatttaagcgtgtgtagcacaacgctttgggtgggt
catttatcgaagctggcaacccaggaagaattgtcggacttattcggtgctttcggtggt
ctcgtctccgtagacctagttccgcctcgcggctgcgctttcgtggtcatggagcgtcgc
cgtgatgcagccagggccaaacaaaagctcgatagacataaattgcattctaaagaaatt
actgtggcgtgggcagcgggtaagggcgtaaagggtcgtgaatggaaggactattgggaa
gcagaactgggcgtggcctatctcccgtggtctgctctacatgcccgctgggtgctgggt
gcgctttctttagacgcattggaagagggcggggctgttgatgaagaaactcttccgcct
tggttgcctccacggattttaccaaaaacgatgccagatattccaatgatacctggccta
acaccggtatccggtccaggtatgctcattccggggccaggaatgcccggtcctgggccc
atgccgggaatgcccaatttagccaatatgcccaatatgcctaacatggcaaacatggcc
aacatgcccccaactagcatggccatgggtggaccacctccagcgagcattcccttacca
gttccgaggatgccaccacctggaatgggtcctggtttgcctgcgggtatgcctccaggg
atgaggcctccgatgcctgcgccgttaccaggagtacaaggagagggatcgctattaggc
tttccgccatctttgccgccacacacattaccacaacccggtatggtgggaagtttcctc
ggtgggctaatgggaatgggagtaggcggattaatgttgcctctacatgcgcacgcgcat
gcgcaacttaatgcgcaaccgccacagcatacgcagccgccgatgcagttacaacagcag
cagcaacaatctgaagtgacgggtgccgacgatgcaatggaactggacacagaagatcac
ctcgatcagacggataaccacatcgacgccacgccttcgaatatgctgcccgatcagtta
caagcgctcatgtctaagccgccaccagcttttaatagctttgaaccgcctcctggcttc
aatccggaaggattcgatgcgagtcaaccgccccctgatgataaaagagatgaagagaga
cgtgagcgggacagacgagatcgcgatagagatagagaccgacgtggagacagagatagg
cgagatggaagagatgtaagagaacgagacaggcgggacaggagggaaggtgacagaaga
ggagatgggcgggacagagaaggtaaccgggaacgtgatgatcgtcgagatagagatcgc
gatagaggaagagacagaagagatcgagaccgggacagggatagagaaagggaccgattc
aatagccgggaaaacaacgctgaaagaattcgggacaaatcaccgcgcaacgagcaaaat
gagaaaagtcttcaagagcgtttatgggagatggccaatggaaaaccggaaaagggagat
gagagaaacatggaggaaccaggcgatgagtctgcccaatctgatattcctccattgcca
gaccgaccagaaaatcaccagcctgataagggaagcgaatctacagaggataatgaaggc
ggatggacgcaggtgccacctccaagacaaatggcgccgggtttccgtgctgaactaaga
atgaggggccctccgctcagaccacccaatagaggatcgtggatggaacaaggacccggt
ggtccaggagggccggggccgtttggtccaaggtttagtatgggaccaccgtttaacaga
ccacctttcgaaggaccgggtcctatgtttgagagaccacccttcaatcgaatgtcattt
gataataggccgccctttgatggtccacgaccgccttttgatggtatgagaccaccgttt
gatgggcccaggccgccatttgacggaccaaggcccccgtttgacgggcccagacctcca
tttgatggcccgagacctcacttcgatggccctaattcacgtcctccattcgatggaccg
agaccccatggaccccggcccccttttgacggccccaggccgcccttcgatggccccagg
ccgtccttcgatggccccaggccgccctttgatggtcccaggccgccctttgatggtccc
aggccgccctttgatggtcccaggccgcccttcgatggccccaggcctccctttgacgga
ccgaggcctcactttgatggccctggacccagacctccttttagcgggtctagaccgcct
tttgacggtccgcgcccgtcattcgatgggcaccggcaatacgatagcttcgatggagaa
aggccgtttgatggcccaactgagtatcgaaatagaagattcgatgacagagaacagttt
gatagaaattggaacagggaaagggacagagaatgggacagagatagaagaaatgagtgg
gatgacagaaggcgcgatagaagaagtggaggaaacgtagaacacgaagacaggttcaga
aatgataggagaaggaataatgacgacagagggcggccgcgtgatgagaagcccaaagaa
gacaaaccattgaaagatgataaatcaactaaagaggatagatcatctagaagagataaa
gatagaaaatctagatggggagcagctgaagagacaagtcaaccagttgaagaacaaaga
acaaatgatcaaatagataatcaaaatgaaagtgtcgttgaaactagtctaagtgagcat
ctggctgatagaaacttcagtaatgaaaacaaattagaagaagtaattgaaaataatgtt
acaaatgaagagagtagtttagaaaataacgcgtccgaaccttttaattcagaggttccc
gacacgcaagagtcgcatgttaatcgtagcgatgacgaatatgaaaataaggaagatagt
tataatggaaacaacaaaattattgaagaagaaaagcaaagtaatgttgcaccgagtctt
tacgatgcaagtgatgatgtacaacctgttttttcagttgcaaaagaagaaaatgaagtg
caaaacgatcgagaagccatatcagaaaataatgatcgtgaaatcatatcagaaaaaaac
gagaatagtgatgatatcattaatgaaaaatgtgttcaagagatcgaagcgaatgagcca
ttggagaaacctgaaactaaagaatgtaaagggggaaatgattga
DBGET
integrated database retrieval system
