Pieris rapae (cabbage white): 110993476
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Entry
110993476 CDS
T05162
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110993476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prap03021
]
110993476
Transcription machinery [BR:
prap03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
110993476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
110993476
NCBI-ProteinID:
XP_022115455
LinkDB
All DBs
Position
10:complement(7075290..7081205)
Genome browser
AA seq
502 aa
AA seq
DB search
MNAPIAGASQSASVQEFKIRVPKDGQKKYHVMRFNATLNVDFAKWTHVKMERENNIKEYK
GIDEDMPKYGAGSEYGRGLREEARRKKFGIISRKYKPEDQPWILKVGGKTGKKFKGIREG
GVSENTAYYVFTHAADGAIDAYPLQEWYNFQPIQRYKALSAEEAEQEFGRRNKVINYFSL
MFRKRMRGDDAQDEEDPDEKKTKTSKSKKELKISDMDEWIDSDDDSSDSEAGDKEKEDSD
SGTKKKPKKGAVAKKKKKVEDEAFEESDDGDEEGRERDYISDSSDSESDHETKANKELKG
VAEEDALRKLLGSDEDSEEDEEQKQESEQEDEHTKEGEERASKLTKKKKKPDEKKESETE
FSSDSDTDPESTSNSKKPKKSKSHTDKASAAGSASTSRSGTPIPSAAQAAVAAANASSAN
QPPSKRAKLDSTYSECGVTEEAVRRYLTRKPMTTTELLTKFKSKRTGVSSERLVETMTQI
LKRINPVKQNINGKMYLSIKPT
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctccaatagcaggggcttcgcaatcggcatcagtgcaggagttcaaaatcaga
gtgcctaaagatggtcaaaagaaataccatgttatgcgtttcaatgcaactctgaatgta
gattttgctaaatggacacatgtcaaaatggaaagagagaataacatcaaggagtataag
ggaatagatgaagatatgcctaaatatggtgctggctcagaatatggacgaggattaaga
gaagaagcaagaaggaaaaagtttggaattatatctcgtaaatataaaccagaagatcaa
ccatggatattaaaagtgggtgggaagactgggaaaaagttcaaaggaattcgtgaaggt
ggtgtatcagaaaacactgcatactatgtctttactcatgcggctgatggtgcaattgat
gcatatccactacaagaatggtacaacttccagccaatacaaaggtacaaagctctatca
gctgaagaagctgagcaggaatttggaagacgcaacaaagtaataaactacttctcgttg
atgttccggaagcgcatgcggggtgatgacgcgcaagatgaagaggatccagatgagaag
aaaactaaaacttctaaatctaaaaaagaattaaaaatctccgatatggatgaatggata
gactcggatgatgactcttcagactcagaagcaggtgacaaagagaaagaagatagtgat
tccggtactaagaaaaagcccaagaaaggagctgtagcaaaaaagaagaagaaagtagaa
gatgaggcgttcgaagagagcgacgatggagatgaagaaggccgagaaagagattatata
tcagactcatctgatagtgagtcggatcatgagaccaaagcaaataaagaacttaaaggc
gtcgccgaagaagacgccctgcgaaaacttctaggatctgacgaggatagtgaagaagac
gaagagcagaaacaagagtctgaacaagaagatgaacatacaaaggaaggtgaggagaga
gccagcaaactcacaaagaagaagaagaaaccggatgaaaagaaggaatctgaaacagag
ttcagttcagactctgatacagacccggagagcacttcaaacagcaagaagccaaagaaa
agtaaaagccatactgataaagcaagtgcagcgggtagcgccagtacttcccgctcaggt
actcccatacccagtgctgctcaggcggctgtggccgctgctaatgccagttccgctaac
caaccgccgtctaaacgagctaaacttgactcgacttatagcgaatgcggcgtgacagaa
gaagcagtacgccgttatttaacacgtaaaccaatgacaactacggaacttctgactaaa
ttcaagtccaaacgcactggagtctctagcgaacgtttggtagagacgatgacgcaaata
ttgaagagaattaaccctgtcaaacagaatattaacgggaaaatgtatcttagcattaag
ccaacttga
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