Pieris rapae (cabbage white): 110993478
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Entry
110993478 CDS
T05162
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110993478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prap03032
]
110993478
03400 DNA repair and recombination proteins [BR:
prap03400
]
110993478
DNA replication proteins [BR:
prap03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
110993478
DNA repair and recombination proteins [BR:
prap03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110993478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
TopBP1_BRCT0
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
110993478
NCBI-ProteinID:
XP_045485760
LinkDB
All DBs
Position
10:7293589..7309724
Genome browser
AA seq
1280 aa
AA seq
DB search
MTEDIIVTFIIPRDSKSENDCSEEMKLAFTACEQHSGGGIRAQFVHESKWKKFDGLTKKD
VFVLSEFSGELFDRLRATKCLLVGPRCLSCCLTEGTPIPSGPDPVYTIAMRGLVVTASGL
SKPQKENIKRKVQWMGGIYSTVLTEETTHLVSDTVLSDKYIKSVEKGIPVMTESWVDAVW
ESSLQLNVNGSSSDFDFHRLPPFTNLQVTTSGITKNEKKLIMKLVNENGGTYSGPFQSES
TDVVVLTKDGVGSEKYKAALEYGKACVLPSWVIDSAERGVALPLHKYKVTGASTSSPLAE
HRLPDMSLNFSRITNFRQPMNFVDESRAADVTTSSGRFKFSQETKKPDTSMDKEIVEAYE
KLDLSKIKMAGPIFDGFCIWLVGLEGICRERATACVSRCGGVRYDCPHERVTHVVAGTKI
AGTAALAALPNVPVLTAMWLLACVEAGRALDEAEYVMNIKMATPKKSKKVPIEPASPMSK
RNLQLLHEPLNLPPPEPEPEPNVQDDLVNHYLSQNVLEPREKTPEPVRDDPVPEITDDMV
DEPTEEIEQIFSGLKIEVQGLEEEAISELGAEISAAGGLLVAKGGGGRGTYRLVPLDWEC
EDEGVEYVTVFWIKDCLSQQELLPLQYYHRPVTVPNSDSEPLNGVVACLSTYSGIERAFL
DELAKLLGATTQLRFCRRNTANAQASTHLICPTPSGDKYLGALKWGLPAVTAEWLLACLE
KGKRVSEKPYLIGDTKAPPTPEKPELEETEIDIQKSMKKERDKQNDMLPPVESNVPRRSL
QKDETPKTKPSDGDDMSPASRYIAMARQGLLGGDSQETPKRPNDSQDLDKQVECAVRTPP
LDDALSTPILANFSPTTRRRLQAVKRGEMPSDPVRTPVDNFAKNIATPDSGFGAALRPGS
GRLSPENRKRLWKIVNDLPSKQDTPTDRHQTPLSEIRNRFLAQFNGNSNTPTAEQSVPTA
RKLHLQDDVETPPSKMAKFNHNQSPSASSMESNESKTSIPGVDAQLQRLSVALSSRHSSQ
RSKRTRDSVSLAVPGPEVETGPESQPNTVGWDDTTPHRAPTEEIKRFMLSSNVDNREEIT
EMIIHLGGEVCEGAELDPRATHLLCSLPGRSEKMLCSVAGGKWVLHPAYIDRSRAAGKFI
SEEEFEWGNPLALTLPTLSGAEASLARAAFKWRSALSKGSPGPFQGVVALLHVPAVRKRL
LGRLLEAGGGMAPDVEPPYTDENVTACFADIKRYPLSDRDARWLISKRIPVCAPVLLSAY
LTDETLPDPKEHCLPEFRPN
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggatataattgtgacgtttattatacctagggactcaaaaagtgaaaatgac
tgttcagaagaaatgaaactagcttttactgcatgcgagcaacattccggtggaggcata
cgtgctcagtttgtgcacgaatcaaaatggaaaaagtttgacggtcttactaaaaaggat
gttttcgtcttatcagagttttctggagagttatttgatcggctccgagcaactaaatgc
ttgttagtaggccctcgctgtttatcatgttgccttacagaaggtactccaataccatct
gggccagatcctgtttacacaatagctatgagaggtcttgttgttacagctagtggatta
tcaaagccacagaaggaaaatattaagaggaaagtccaatggatgggaggtatctacagt
actgtgctaacagaagagacaacacaccttgtgtctgatactgtgctctcggacaaatat
attaaatctgttgaaaaagggataccagtaatgactgaatcctgggttgatgctgtgtgg
gaatcgtcactgcagctcaatgtcaatggaagttcaagtgattttgatttccaccgctta
ccaccatttactaatctgcaagtgaccacctcagggataacaaaaaatgagaaaaagttg
ataatgaagttagttaatgagaatggtggtacttattctggtccgttccaaagtgaaagt
acagatgtagtagttcttaccaaggatggagtcggcagcgaaaaatacaaggcagcattg
gaatatggaaaagcgtgcgttctaccatcctgggttattgattccgcggagcgcggtgtg
gcattacccctacataaatataaggtgactggggcctcaacatcttcgcctttggctgaa
catcgcttgcccgatatgagtttaaacttttctcgtataacaaactttagacagccgatg
aattttgttgacgaatctagagcagcggatgtcaccacatcgtctggaagatttaagttt
tcacaagaaacaaaaaaacccgatacatctatggacaaagagattgtggaagcttatgag
aaacttgatttgagtaaaatcaagatggctggtccaatatttgatggattttgtatatgg
ctagtaggcctggaaggcatttgtcgtgaacgtgcaactgcgtgcgtgtcacgttgtggt
ggcgtacgatacgattgtccgcacgagagagtaacgcacgtagtggccggtacgaaaata
gctggtaccgcggctttggctgccttgcccaatgtacctgtgttgactgcgatgtggtta
ttggcctgtgttgaggctggaagggcgcttgatgaggccgagtatgttatgaatataaaa
atggccacgcccaaaaaatcaaagaaagtgccaatagaaccagcatcgccgatgagtaaa
cgcaacttacagctattacatgagcctttaaacctacccccaccggaaccagaaccggaa
ccgaatgtgcaagatgaccttgttaatcattatttaagtcaaaatgtattggagccaaga
gaaaaaactccggagccagtaagagatgatcctgtacctgaaattactgacgatatggta
gatgaaccaacagaagagattgaacaaatatttagtggtttgaaaatcgaagtccagggc
ttagaagaggaggcgataagtgagttaggagcggagatttcagcagctggggggttgtta
gtggccaagggcggtgggggtcgagggacttatcggcttgtgcccctggactgggaatgt
gaggacgaaggggtcgaatatgtcactgtcttttggattaaagattgtttaagtcaacaa
gaattacttccattgcaatactaccatcgtcctgtgacggtacccaactctgatagtgaa
ccactaaatggggtagtggcctgtcttagtacatatagtggaattgagagggcatttttg
gatgaattggctaagctacttggtgccacaacccagcttcgtttctgccgacgtaacacg
gcgaatgcccaagcgtcaacccatcttatatgtcccaccccaagtggggataaatattta
ggggcattaaagtggggccttcccgcagttactgctgagtggctcctagcttgtcttgag
aaagggaagagagtcagcgaaaaaccttatctcattggagatactaaggcgccacctaca
cctgaaaaaccggaactagaagagaccgagatagatatacaaaaatcgatgaagaaggaa
agagacaaacagaatgacatgcttcctcctgttgaaagtaatgttccgaggcgctcatta
caaaaagacgaaacacctaaaactaaacccagtgatggcgacgacatgtcacccgcgtca
aggtacatcgcgatggcccgacagggcttactggggggtgactcacaggagactccaaag
agaccaaatgactcgcaagacttggacaaacaagtagaatgtgcagtccgaactccgcca
ctagacgacgcactttccacgccaattcttgctaacttcagtcctaccacacgacgtcgg
ctgcaagctgtaaagagaggggagatgccttctgacccagtaaggacaccggttgataac
tttgccaaaaacatagcaacaccagatagtggattcggggcggctttgagacctggttct
ggtcgactttcccccgaaaataggaagcgtttatggaaaatcgttaacgacctgccatca
aaacaagacacacctactgatagacatcagacgccattatcggagatcagaaatcgattc
ctggcgcaattcaatggtaactcaaatacgcctaccgccgaacaaagtgtacccacagcg
aggaagttacatttgcaagatgacgtggagacgccgccttctaaaatggccaaatttaat
cataatcagagtcctagtgcgtctagtatggaatccaatgaaagcaaaactagtataccg
ggagtcgatgcccagttgcaaagactcagtgttgccctcagttcgaggcatagttcacag
cggtccaaaagaaccagggattctgtgagcctggctgtacctggtccagaagtggaaacg
ggaccagaatctcagccgaatactgttggatgggacgacaccacgccccaccgcgcccca
actgaggagatcaaacggtttatgttgtcttctaatgtcgataatcgagaagaaataact
gaaatgataatccacctgggaggagaggtctgtgagggagctgagttggaccctcgcgcg
acgcatctcctctgttctcttcccggacggagtgagaagatgctgtgctctgtggccggt
ggtaaatgggtgctgcatccagcttatatagacaggagtagggctgctggaaagtttatt
tcggaagaagaattcgaatggggcaatcctctcgccctaacactcccgactctttcgggg
gcagaggcaagcctcgcccgtgccgcttttaagtggcggagtgcgcttagcaagggatcg
cctgggcccttccagggagttgtggccctgttacatgtaccagctgttagaaaacgattg
ttgggcagattactggaagcaggcggtgggatggcgccagatgtggaaccaccatacaca
gatgaaaatgtgactgcgtgctttgcggatataaaaagatatccgctttccgatcgagat
gcgaggtggcttatttctaaacgcattcctgtgtgtgcccctgtactactgagcgcgtac
ctcacagacgagacactgcctgaccctaaagaacactgtcttcccgaatttagacctaat
tag
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