Pieris rapae (cabbage white): 110993551
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Entry
110993551 CDS
T05162
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110993551
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prap02000
]
110993551
Transporters [BR:
prap02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110993551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
SMC_N
AAA_22
AAA_29
RsgA_GTPase
AAA_23
nSTAND3
nSTAND1
nSTAND6
Motif
Other DBs
NCBI-GeneID:
110993551
NCBI-ProteinID:
XP_022115544
LinkDB
All DBs
Position
13:complement(6157187..6200402)
Genome browser
AA seq
1699 aa
AA seq
DB search
MSKYEKLKLLIWKNFLLQRRHKWQTVFEIASPVVFSLFLILIRCLVDPQSKPAESYQPFL
PTYFNMSSRHMGNLTSAKREGTLAFSPENPLIRNVTKNAMATVALDNLGFLALFFDTGML
PDPKGFKDAQELEKALTQPNAMNKILVGIQFNDNMANATKWPDHIDVTLRFPAVMRTPMY
DHPLRLSWRTNLLFPLFPLPGPRAPEDMYGGQTPGYSPEMFLAVQHAISQEIIKQKSGKP
INTKIYLQRFPQNAYRKDDLLVAMERFISMIIMLCFAYTFVNTVRVVTAEKELQLKETMT
IMGLPSWLHWLAWFIKQFSFLLISVVLMVILFKIPFNATIDGERYSVFTYTPWSVLLFFM
VLFVMASLAFCFMVSVFFTRANTAASFMGLMWFSTYSAYFLTQMLYEDVSLHTKFLLSLI
SNAAMGFVLQMLIICEGTSQGLQWSEIFSPVAYHDDFQPGHVVLMLIVDTIIYMTIALYI
EKIRPGNYGVPLPWYFPFTKSFWLPNKTRIAGITLKDGIDQEYKNALLKVVHDEEPKGVP
MGINIENLTKVYKGRKKAVDNLNLRMYENEITVLLGHNGAGKTTTISMLTGMVPPTSGTA
TINGYNIVTETELARKSLGLCPQHNVLFPDLTVAEHIVFYSRLKGVQKSKINDEVNHFLK
LLELEEKRDVQSAHLSGGQKRRLSVGAAMCGSSRVVLLDEPTSGLDPAARRSLWDLLQKE
KKGRTIILTTHFMDEADVLGDRIAIMSGGKLQCVGTPYFLKKHYGIGYKMTIVKQEDCNV
QNVTSFLRNYVPDIRDNTNIGSELTYILPNEHVSKFPEMLKKFEEERTSLKVSSYGLSVT
SLEEVFMKAGAEDHDVISVQKNNYTNHSNSVIVPIENNRNHFANNEPLQKVKGAKLLRNH
IKAMFLKLAYNSMRNKLSAFIQIVTPIINITISVIIARSWRFITNLPPLELTLTSGFKNT
ETLISEGVNLTESSVERRTMKAYMDFFKSSTYPNMVLKDIGTMDIGKFYLKLSESNPARI
RYENLIGATFAPNRITAWFSNYGYHDSAISLSLANNALMNALSPGSTLRVINYPLPYSIE
NLVRILASGSSLGFQFAFNIGFCMAFVTAFLVLFVIKERVSGAKLLQRISGVRPGVLWTC
SFIWDWFWMLCVYMTIVLTLAFFQESTLSTPEELGRVLLVLVVFSLATIPLHYLASFWFE
ASATGFSKMCFVNIFSGCMPFLITEVLRLPEFGSPYYAGIFDWVFAPLPLYCMSRSFKDM
SLSSFKMLICDGLCTQLELQNCTRQSLCTQINMTVCCNLDDNTFLKWEEPGIGRYLFMMT
LVGVIAFSVLLIKEYEVINKIFYSETPYRPLPIRPDEDSDVAAERETVQQLTKPELAQHS
LICKDLTKYYKEFLAVNRLTFAVRKGECFGLLGINGAGKTSTFRMATGDTHLSAGDVYVH
GMSVKTQIRDVHAHMGYCPQFDALLENLTARETLKIFCLLRGIPVKIGSQWALQLAEQLG
FSRHYDKKVHECSGGTKRKISTALALLGDAPLVFLDEPTTGMDPASKRRVWRCISDAVLS
GRSVVLTSHSMEECEALCSRLTVMVNGRLFCLGPLQHLKNKFSQGYTLIVKCRETSQRVA
DVARIREFVIDNFQDARHIETYLGISTYYIHDQELLWWQLFDKMEEAKSLYPIEDYSVSQ
TTLEQVFLQFTRMRDNSRT
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatatgagaaactcaagctgctgatttggaaaaattttcttttgcaaagaagg
cataaatggcagactgtctttgaaattgcgtcgccagtggtgttctcgttatttttaatt
ttaatacgatgcctcgttgatccgcaatcgaaaccagctgaatcataccaaccatttcta
ccaacttattttaatatgagcagcagacacatgggaaatctaacttccgcaaaacgagaa
ggaactcttgcgttttcaccagagaatccattaatacgaaatgtaactaagaatgcaatg
gcaacagttgcattagataacttaggatttctggcattattttttgatactggaatgctg
cctgatcctaaaggttttaaggatgctcaagagttagaaaaagccctaacccaacctaat
gctatgaataaaattctagttggaatccagtttaatgataatatggctaatgccacaaaa
tggccggaccatattgatgtaacactaagatttccagctgtaatgagaacacctatgtat
gaccaccctcttagattaagttggagaaccaacctgctgtttcctttgtttccactgcca
ggacccagagctccagaagacatgtatggagggcaaacaccaggttactcaccagaaatg
ttcttagcagtccaacatgcaatttcccaagaaataattaaacaaaaatctgggaaaccg
ataaatacaaaaatatacttacaaaggttcccacagaatgcgtataggaaggacgatcta
ttggtggcaatggagagatttatatctatgataattatgctctgttttgcatacactttt
gttaatactgtgagggtggtgacggcggaaaaggaattgcagctgaaggaaaccatgaca
ataatgggtctaccgtcatggttgcactggctcgcttggtttataaaacagttctcgttt
cttctcatatctgtcgtgctcatggtgatactattcaagatcccatttaatgccaccata
gacggggaacgatattctgtcttcacatacacgccgtggtctgtccttctattcttcatg
gtactatttgtaatggcttctcttgccttctgtttcatggttagcgtgttctttacaaga
gctaacactgcggcttcattcatgggtcttatgtggttttcgacatattcagcgtatttt
ctaacgcaaatgctttacgaagatgtaagcctccatacgaaatttctactcagtttgata
tcaaatgctgcgatgggcttcgtactacagatgctgataatttgtgaggggacttctcaa
ggcttacaatggagcgagatattttcacctgttgcgtatcatgacgatttccaaccaggc
catgtggtgttaatgttaatagttgatacgataatatacatgactatcgctttgtatatt
gagaaaattcgtccaggaaattatggtgtgccattgccctggtactttccatttacgaag
agcttctggttgccgaataaaactaggatcgcagggataacattaaaggatggtatcgat
caagagtacaaaaacgcgttgttgaaggtagttcacgacgaagagccaaaaggtgtacca
atgggtataaatatagagaacctcacaaaagtatacaaaggtcggaagaaagctgtggat
aatttaaatctacgaatgtatgaaaatgaaattacagtgttgttaggacataatggagct
ggcaagaccactacaatatcgatgcttacaggtatggtaccgcccacatccggtacagct
actataaacggatataatattgtcactgaaacggaactggcaagaaagtcacttggtctc
tgcccgcaacataacgtgctcttcccggatctgaccgttgcagaacatattgtcttctat
tcgaggctaaaaggcgtgcagaagtcgaaaataaacgatgaagtcaatcatttccttaag
ctgttggagctggaagaaaagagagatgtacagtcggcacatttatcgggaggtcagaaa
aggcggttgtccgttggcgctgctatgtgtgggtcctcaagggttgtgttgttagatgaa
cccacttccggattggacccggccgcgaggagatcgctgtgggatctcttacagaaagag
aaaaaagggcgaacgataattctaacaacacattttatggacgaagctgatgtactaggc
gaccgtatagctataatgtctgggggtaaactgcaatgtgtgggaacaccatatttcctt
aagaagcattatggtataggttataagatgaccatagtgaagcaagaggattgtaacgta
caaaatgttaccagttttttgagaaattacgtcccggatattagggataatacgaatata
ggttcggaattaacttacatactccctaatgagcacgtcagcaaatttcctgaaatgtta
aagaaatttgaagaagaaaggacttccctgaaggtgtccagttatggcctttctgtcacg
agcctcgaagaagttttcatgaaagccggtgccgaggaccatgatgtgatatcggttcag
aaaaataactatacgaatcacagtaatagtgtgattgtccccatcgagaacaatcggaat
cactttgcaaacaacgaaccgttacaaaaagtaaaaggcgcaaaattattaagaaatcac
ataaaagctatgttcctcaaactggcctataattctatgagaaataaactctctgccttc
atacagatcgtaacaccgattataaatataactatatcagttattatagcccggtcttgg
cgatttataaccaacctacctcccttagagttaactttaactagtggttttaagaatacg
gagacgcttatatctgaaggagttaatttgacggaatcaagcgtcgagagaaggactatg
aaggcttatatggatttctttaaatcatcaacgtaccctaatatggttctgaaagatatc
ggaactatggacattgggaagttttatttaaaattgagcgaatcgaaccccgcccgtata
cgttacgagaacttaataggtgctacgttcgcaccgaatcgcatcacagcctggttcagt
aattatgggtaccacgactcggccatatcactctccttggctaacaatgcgctgatgaat
gctttatcgcctggttccactttacgggtcattaactatcccctgccgtattccattgag
aatcttgttagaattctagcttcgggtagcagtttaggattccagttcgcgttcaatata
ggattttgtatggcgttcgtcactgcattccttgtattatttgttataaaggaacgagtt
agcggcgccaaactcctgcagcgtatatctggagtaagacctggcgtgctctggacgtgt
tctttcatctgggactggttctggatgttgtgcgtctacatgacgatagtcctcacactt
gcgttcttccaggaatcaacgctgtctactccagaagagttgggtagagtccttcttgta
ctagtggtgttttcgctggcgacgataccgctacactacttggcgtccttctggttcgaa
gcttcggcaactggtttctcaaaaatgtgctttgtcaacatattttcaggttgtatgccg
tttctaataacagaagttctgcgtttgcctgaattcggtagcccctactacgcgggaata
ttcgactgggtgttcgcgcctttaccgttgtattgcatgagcagaagtttcaaggacatg
agcctgtcgtcattcaagatgctgatatgtgacggcctatgtacgcaactggagcttcag
aattgtacgaggcaatcgctgtgcacgcaaattaacatgaccgtgtgttgtaacctggat
gataatacatttttgaaatgggaagagcctggaatcggacgttatctttttatgatgaca
ttggttggtgtcatagcattctcagttctgcttatcaaggagtacgaggtgattaataag
atattctactcggagaccccttaccggccattaccaataaggccggacgaagatagtgac
gtagcagcagaaagagaaacggttcaacagcttactaaaccagaattggctcagcatagt
ctgatctgcaaagacctcaccaagtactataaggagtttctggcagttaatagactgact
tttgcggtgcgtaaaggcgaatgtttcggcctattgggtatcaatggtgcgggtaaaacc
agtacgttccgtatggcaacgggtgacacgcatcttagcgcgggtgacgtatacgtgcac
ggaatgtccgttaagacgcaaatacgggacgtgcacgcacatatgggttactgcccgcag
ttcgacgcattacttgaaaaccttactgcacgcgaaacactcaaaatattctgcctgctg
cgaggtattccagtgaaaatcggctcccagtgggccttacaactcgcagaacagcttggt
ttctctaggcattacgataaaaaggttcacgaatgcagtggtggaacgaaacggaaaata
agtacggctctcgctctgttgggggatgctccattggttttccttgacgagccaaccaca
ggtatggacccagcatcgaaacgccgagtgtggcgttgtattagtgacgccgtcctatcg
ggacgtagtgtagttctcacctcgcatagtatggaggagtgtgaagctctttgctccaga
ttaactgttatggtcaatggacggctgttctgtttgggaccgctacagcatcttaagaac
aaattctcacaaggttatacactaattgtaaaatgcagagagacgtcacaaagagttgca
gacgttgcaaggataagagagtttgtcatagacaatttccaggatgctagacacatcgaa
acctacctcggcattagtacgtattacattcacgaccaagagttgctttggtggcagctt
ttcgacaaaatggaggaggccaaatccctttaccccatcgaggactactccgtatcgcag
acgacgctcgaacaagtgttcttgcagtttacgcgtatgcgagacaactcacgtacgtaa
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integrated database retrieval system
