Pieris rapae (cabbage white): 110994150
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Entry
110994150 CDS
T05162
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04137
Mitophagy - animal
prap04140
Autophagy - animal
prap04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110994150
04137 Mitophagy - animal
110994150
04148 Efferocytosis
110994150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prap03000
]
110994150
Transcription factors [BR:
prap03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110994150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
bHLH_HIF1A
PAS_11
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
110994150
NCBI-ProteinID:
XP_022116356
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All DBs
Position
1:complement(11017214..11084266)
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AA seq
941 aa
AA seq
DB search
MLVNGDPLPQVPGWRGECSNFQWTPPVQNICDYNSCNVIGDYSNQRYLADYYVRDPGIQY
FCPTVNNVQPSVPVNVCYPQKPAPQFMQALPCRQTQEWDYDSMCYNVGGEPCQFTSVVDL
EDFMNNEKRKEKSRVAARCRRTKEMQIFNELTAALPAKKEEVEQLDKASVMRLAISYLRV
RDVVSMLPADTDAPTLQSPKGLEEVQSELSYMKALDGFVLVLSQQGDIVYCSENIAEHLG
VSQMEIMGQSVFEFSHPCDHDEIREALRASKVGKRDMLLRLKCTITAKGRNVHLKSASYK
VIHLTGHMLTEEKPENEIDKKDGVKLNKNGALVAVGRPIPHPSNIEIPLDSKTFLTKHNL
DMKFTYTDEGLMNTLGFDAGDLNGRSLYDYHHAADSASLAHQFKSLFSKGQCETGQYRFL
AKTGGYAWVQTQATVITDKQQKPISVVCVNYVISGIECKDEVFAAHQVQPADLKPVVTPI
ATSIATAPSCVSEPANGAIVAAILPEEERPIPVTELIFAPREKEMNKGYLTFSQNEGFTS
EWNLKRDSLVLKDEPEDLTHLAPTAGDTCIPLENSPFDMFDEFILNDNYCSLLGDDLANG
SPVDSLIADSLLSSPERQENESTGEQSSLLTELSLDAYDSARSDNDIDDGNSPFIPINDD
LPILEPAVMWGALPDSVRQARPQPSEPQTSAPALQRLLAAPPTGPPPQDLITNIYSDPGL
IPNKSISTWDTGVKRVLKQEEEPCSKRAKRSPSPAPAPTSQSSSSVLMNLLDMERARQER
ISTNYRLVPNPQLSVSNRNIPIPVINIIQANKQGAHAPIIRSTQSAPMSPLSLNIGQYSM
PCSPNYSPVGSPMKVHSTPQSLSPASSYTFSPGRMVSPTGALQGYDPYLSNKMQVSPGFP
MQTEMLLDPNVGLVSNDFWPDTDVIQNTSDLLTAFDDVKLV
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgaatggtgatcctctaccacaagtacctggttggcgtggagagtgctcaaat
ttccaatggacgccacccgtgcaaaacatttgcgattataactcttgtaatgtgattggt
gattattcgaatcagcgctatctggctgactattacgttcgtgatcccggaatccaatac
ttttgtccaaccgtaaacaatgttcagcccagtgtcccggtaaatgtatgttacccacaa
aagcctgctccacagttcatgcaagcattgccttgccgccagactcaagaatgggattac
gatagtatgtgctacaatgttggcggtgaaccatgtcagtttaccagtgttgttgatttg
gaggatttcatgaataatgaaaagaggaaggagaaatctcgggtggcggcgcggtgtcga
cgtactaaggagatgcagatatttaacgagctgactgcagcactacctgccaagaaggag
gaggtggaacagcttgataaggcatcagtgatgcgactggctatctcctaccttcgcgtg
cgtgatgttgtgtctatgctaccggctgacactgatgcgccgacgctgcaaagccccaaa
ggtctggaggaggtgcaatctgaactgtcctatatgaaggccctggatggcttcgttctg
gtgctctctcagcagggcgatatcgtgtactgtagcgagaatattgcagaacacctggga
gtatcacagatggaaataatgggccaaagcgtcttcgaattcagtcacccctgcgaccat
gacgagatacgagaagcgttgcgtgcctccaaagtgggaaagcgggacatgctactgcga
ctcaaatgtaccataacggcaaaagggagaaatgtgcatttgaaatcagcttcgtataag
gtaattcacctaactggccacatgctgacagaagagaaacccgaaaatgagattgataaa
aaagatggcgttaagttaaataaaaatggcgctttggtggcggtggggcggccaataccc
cacccgtcgaatattgaaataccacttgatagtaagacgtttcttactaaacataatctg
gatatgaagttcacgtatacggatgaaggattaatgaatactcttggcttcgacgctggc
gatttaaacgggcgttccctatatgattatcatcacgcagccgatagtgcatcattggct
catcaatttaaatcattgttctcaaaggggcaatgcgaaaccgggcaataccgtttcctg
gcgaagactggcggctacgcctgggtccaaacccaggccactgtcatcacagacaaacag
cagaagcccatcagcgtcgtctgcgtcaattacgtaatcagcggtatcgagtgcaaagat
gaagtattcgctgcacaccaagtgcagcctgcggacctaaaaccagttgtgacaccaatc
gcgactagtatagccactgcgcctagctgtgtatctgaaccggctaacggcgccatagtg
gctgcaatcctcccggaggaggaacgcccaatacctgtcacagagctcattttcgcccca
agagagaaagaaatgaacaaaggctatctcacgttctcccaaaacgagggatttacaagt
gagtggaacttgaaacgcgacagcttagtgctaaaagacgagcccgaggatctgacacat
ttggctcccacggctggtgacacttgtattcccttggaaaacagtccttttgatatgttt
gacgagtttatattgaacgataattattgtagtctactcggcgatgatctagcaaatgga
tcacccgtagattctttgatagcagactctttgctgtcatctcctgaacgtcaggaaaat
gaatcaaccggcgaacagtcttcattattaacggaattatcgttggatgcgtatgacagc
gcaaggtcggacaatgatattgacgatggcaactctccattcattccgatcaatgatgac
ttaccgattctggaaccggcagtcatgtggggtgctttaccagacagtgtcagacaggca
agaccccagccatcggagccgcagacgtcagcaccggcgttacagcgtttgctggccgct
ccccctaccggaccacctccacaagatctcatcacaaatatttattcagatccaggactt
ataccaaataagagtatatccacatgggacaccggtgtaaagagggttcttaaacaagag
gaagagccctgctcgaagcgggcaaagcgtagcccctcccccgctcccgcgcccacctca
caatcatcatcgagcgtcctcatgaaccttctggatatggaacgggcgaggcaagagagg
atttcaacaaattatcgtcttgtcccaaatccacaattatccgtctcgaacagaaatatc
ccgattcctgtcataaacataatacaagcgaataaacagggcgcacatgccccaattata
cgctcaacccaaagtgctccgatgtctccattgagtcttaatataggccagtactccatg
ccatgcagtccgaattacagccccgttggtagtccaatgaaagttcattccacgcctcag
tcgctatctcctgcgagtagctacaccttcagccccggtagaatggtgtctccaactggt
gcgctacaaggctacgacccgtacctatcaaataaaatgcaagtcagccctggattcccc
atgcaaaccgaaatgcttcttgatccaaacgtaggcctcgtatccaatgacttttggcca
gatacggacgtaattcaaaacactagcgatcttctgactgcttttgatgatgtaaaatta
gtttaa
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