Pieris rapae (cabbage white): 110994205
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Entry
110994205 CDS
T05162
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prap03036
]
110994205
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
110994205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_alsin
MORN
WD40_RLD
RCC1
VPS9
HA_Alsin
Alsin_RLD
RCC1_2
DH_Alsin
DH_ALS2
RFX1_trans_act
BrxB
PH
Motif
Other DBs
NCBI-GeneID:
110994205
NCBI-ProteinID:
XP_022116422
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All DBs
Position
10:4376640..4391554
Genome browser
AA seq
1584 aa
AA seq
DB search
MSHHKFWRGIEQLKVSSSLDIPEKIVKLCSLGADFIALGNDHGLYYCNIEGDILNFKREN
GITAIDISYHNDILYIINEHGRLYKTNTNFKTKEEVVVKEESKCCPHGFKSSSSKVKFRN
VVSSGFGQLFISSDGHLWGSGDMPQIGLESSSIKKVPFFEGRTVYSASIGDNFAAVIARK
DVRQSGNCDTDSDNDDEEVFASNCSQCQTIIGLASPASVPSLSETCPLGVHISKSSEDSS
STTAPQTDVHVDAQSFTEDSSPSSEESKIIKKDFPLHVSNNLELDGISKHDENEANNTDD
NKSLDASTEKLNNIFINTDAARQFLSRQLSWVSAGEDYLVEYTEKPTRIIKENVTNITNF
VYEGVKTVGDKVATLSRHVSGSSDNNETVDIQHPNCNDDMISSLLYSCNSATKSDDLQFS
TSTINSEKEFEVTKKDEALKNMSKLGKNILATELWTWGDITHGQLGIGDTVKRVKPMAVM
SLSGFGLQKVSCGNWHCAALTLDGRIFMWGYNHFKQVCLESRDYKSSPKQFTENSDSDRI
RDMIATDNHTLAYTHNENLYYMGKHTDGYTDVIVNLNESLIENSDKQSTEKTVKIKEPQV
FGQSQNLCYHWRVLSSGTISYCSIEESTICPEFQNLSIAQRYLEEMLLIYHLLIKPFLRK
SKAIIAHSNIYETVCDIFSDILNLTALNVLSTWQYAEKHINECDISLIKNLEEYIYLYKK
YYIAVSNLIVIGGFAQINNIVDVPTNVYNMFSDQLPTNKQKNNKKTSEAVVSLAFIQPLV
RLSSYKCIAQSLLRCITKKKKGETKTNIEEKLTKVVTTLDSLIEEQEKRRKEADITKLFW
ETIGKSLEQYRTPERRLIRESKSKPLNLVNPGRFSSHWFILFNDLFVHVNGSTPILHPLE
TLWIDASPNVDIQNGIQITTPEEIISVSTNSEHEKTEWIHVLNAAIKSVLKKDTSFTPPT
IRSGSYVFSSKSLFYKDAKYVGRWLDGKLHGHGKVEWPDGKIYCGQFQINTLCGHGKMDI
PGVGIYEGRWKDNLQNGYGIMKYACGDIYEGYFKDGHPHGHGIKKQGDFTSSSATIYTGE
WVGGAKHGYGVMDDIGKGEKYLGNWSDNKKHGCGLIVTLDGIYYEGLFTQDILTGHGVMV
FEDGTNYEGEFRAAGVFSGKGTLTFSSGDRIEGSLNGAWTEGVKISNGVMHLNVSNPAMP
PNSKPNSFGKLSVAPNQKWNAIFRQCFNCLGVSETILTPTGNHFTNGPCPTFDNVKIWQN
VAVTISCSQKHSQTPKKNGSDLEKSVDCLELIPHFGQKTLTLHDYTELKLYLQNACETTH
HPLGQLVLNVTNAFNTTYGGVRVHPLLLSHAIKELKCITTRLYQVVKLLFPALPGEGTDV
VLPYEEREEDGNPIEGEVVSAASLLQPTLLPRVHPALFVLYALHNKREDDLYWRRLMKWN
KQPDTTLMAFLGIDQKFWAKSTHHSPTYSPMKEQLFQDAVETLQQLKTTFSPIEKLLVIR
STFQKMTVAVQQELGAQYLWSMDDLFPVFHFVVVRARILQLGSEIHFVEDFLEPAMQHGE
LGLMFTTLKACYFQILQEKMSMNS
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccacaaattttggagaggtatcgaacaattgaaggtctcgtcgtctctggat
atcccagaaaaaattgtgaaactttgttctcttggcgcagactttattgctctaggaaat
gaccatggcctctattattgtaatattgaaggagatattttaaattttaaaagagagaat
ggtataactgcaattgacatatcctatcacaatgatatcctgtatattattaatgaacat
ggaagactttataaaacaaacacaaattttaagactaaagaagaagtagtggtcaaagaa
gaatcaaagtgttgtccacatggttttaaaagtagtagttcaaaagtaaagtttagaaat
gttgtgtccagtggctttggccaactctttataagtagtgatggccatctctggggttca
ggagacatgccacaaattggcttagaatcatctagtattaagaaagttccattttttgaa
gggaggacagtttatagtgcatcaataggagacaactttgcagctgttatagcacgcaaa
gatgtaaggcaatcaggtaattgtgatacagacagtgataatgatgatgaagaagtattt
gcctcaaattgctctcaatgtcaaactattattggtctagcatctcctgcctctgtgcca
tcactctctgaaacatgtccattgggagttcatataagtaaatctagtgaagattcaagt
agtaccaccgctccacaaactgatgtacatgtagatgctcaaagtttcactgaagattct
agtccttcctctgaggaatcaaaaattatcaaaaaagatttccctctccatgttagtaac
aacctagaattagatggtatatcaaagcatgatgaaaatgaggctaataatacagatgat
aataaatctttagatgcaagcacagagaaactaaacaatatttttatcaacacagatgca
gcaagacaatttcttagtaggcagctatcgtgggtttctgctggagaagattacttagta
gaatatacagagaagccaacaagaataataaaagagaatgtcacaaatattactaatttt
gtttacgaaggagttaaaactgttggtgataaagttgcaacattatcaagacacgtcagt
ggcagcagtgacaataatgaaacagtggatattcaacatcccaattgcaatgatgacatg
ataagttcactgttatacagttgtaattctgcaacaaaatctgacgatttgcaattttca
actagcacaattaatagtgaaaaggaatttgaagtgacaaaaaaagatgaagcgcttaaa
aatatgtcaaaacttggcaaaaatattttagcaacagaactttggacatggggtgatata
acccatggacagttaggtataggagacacagttaaaagagtgaagccaatggctgtaatg
agtctatctggatttggtctacagaaagtttcttgtggtaattggcactgtgcagcttta
acattagatggaagaatatttatgtggggctataatcattttaagcaagtctgtttagag
tcaagagattataagagtagtcccaaacaatttactgaaaattcagacagtgatcgcatc
agagacatgatagcaactgataatcatactttagcttacactcacaatgaaaacctttat
tatatgggaaaacatactgatggctatacagatgttattgtgaacttaaatgaaagtttg
atagaaaattcagataaacagtcaacagaaaaaactgttaagataaaggaaccccaagtt
tttgggcaatctcaaaacttgtgctatcattggagggtgttatctagtggaacaataagt
tactgttctatagaagagtcaacaatatgccctgaattccaaaacctatcaattgctcaa
cgttatttggaagaaatgctcctaatatatcacttacttataaagccattccttagaaaa
agcaaagcaataattgcacattccaatatatatgaaactgtttgtgatatttttagtgac
attttaaatctaacagcattaaatgttctatcaacttggcagtatgctgaaaaacatatt
aatgaatgtgatatctctttaataaaaaatttagaagagtatatttatttgtacaaaaag
tattacatagcagtaagcaatttaattgttataggtggtttcgctcaaataaataacatt
gttgatgtacctacgaatgtttacaatatgtttagtgatcagttacctacaaataaacag
aaaaataataagaaaacgtccgaggctgtagtaagcttggcatttatccagcccttggtt
cggttaagctcatataagtgcattgctcaatctttattgcgctgtataactaagaaaaag
aaaggtgaaactaaaacaaacattgaagagaaactaacaaaggtggttaccacattagat
tccttaatagaagaacaggaaaaaaggagaaaagaagctgatataactaaattattttgg
gaaaccatagggaaaagtttggaacagtatagaacaccggaacgaagattaataagagaa
tcaaaatcgaaaccccttaatcttgtcaaccctggtcgattttcctcccattggttcatt
ctatttaatgatttatttgttcatgtgaatggaagcacaccaatacttcatcccttagaa
acactatggattgacgcgtcaccaaatgtagatattcaaaatgggatacaaatcactacc
cctgaagaaataatttcagtttcgactaattctgaacatgagaaaacagagtggatacat
gttttgaatgcagccataaaatcagtattaaagaaagacacctcattcacgccaccgaca
attagaagtggcagctacgttttttctagtaagagtttattttataaagacgctaagtac
gtcggccgatggctggatggtaaattgcatggccatggaaaagtcgagtggccagatgga
aaaatctattgtgggcaatttcaaattaatacattatgtggtcatggaaaaatggatata
ccaggagtaggtatctatgaaggaagatggaaggacaaccttcaaaatggctatggtatt
atgaagtacgcatgtggtgatatttatgaaggctactttaaagatggccatcctcatggc
cacggaatcaaaaaacagggagatttcacgtcgtcttccgcaacaatatatacaggcgaa
tgggttggaggagcaaaacatgggtatggagtcatggacgacattggaaaaggcgaaaaa
tatttaggcaattggagtgataataagaagcacggctgcggccttattgtaaccctcgat
ggtatttactacgaaggactatttacacaagacattctcacgggccatggggtcatggtt
ttcgaagatggaactaattatgagggggaattcagggcagccggtgttttttctggaaaa
ggaaccttaacgttctctagcggtgatagaatagaaggatcccttaatggtgcctggact
gaaggtgtcaaaatatctaatggagttatgcatctcaatgtttctaacccggccatgcct
ccaaactcaaagccgaattctttcggaaaactgagtgttgcgccaaatcaaaaatggaac
gcgattttccgacagtgtttcaactgtttaggcgtttccgaaacgatcctaacaccaacc
ggcaatcattttaccaatggcccatgccctactttcgataatgtgaagatatggcaaaat
gtcgccgtgactatatcgtgttcacagaaacatagtcagactccgaagaaaaacgggtcg
gatttagaaaaatctgtcgattgtttagaacttataccgcattttggccaaaaaaccctc
acccttcacgactatacggaattgaagctgtatttacaaaatgcctgcgaaacaacccac
catcctctaggtcagctagtattaaacgtcacaaatgcttttaacacgacgtatggtggt
gtcagggtacatcccctacttctgagccatgctatcaaagaactaaagtgtattaccacg
agattataccaagttgttaagcttttgttcccggcgttgcctggagagggcactgatgtg
gttttaccatacgaagagcgggaggaggatggaaatcctatcgaaggtgaagtggtatca
gcggcttccttacttcaacccactctcttgccgcgagtgcacccggcactgtttgtcttg
tatgcgcttcacaataaacgggaagacgatttgtactggcgaaggctgatgaagtggaat
aagcaacccgataccactcttatggcctttttggggattgatcaaaaattctgggcaaaa
agcacccaccattctcccacctactcaccgatgaaggaacagctcttccaagatgctgta
gagactcttcagcagctcaagacaacgttctcgcctattgaaaagctgctcgtcatcaga
tccaccttccagaagatgaccgttgctgttcaacaggagttaggagcccaatatctttgg
agtatggacgatctatttccagtattccattttgttgtggtgcgcgcgcgcatacttcaa
ttgggttcagaaattcactttgttgaagattttcttgaaccagctatgcaacatggggaa
ttgggactcatgtttaccactttaaaggcatgctacttccaaattcttcaagaaaaaatg
tctatgaattcttaa
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integrated database retrieval system