KEGG   Pieris rapae (cabbage white): 110994309
Entry
110994309         CDS       T05162                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit 1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03030  DNA replication
prap03410  Base excision repair
prap03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110994309
   03410 Base excision repair
    110994309
   03420 Nucleotide excision repair
    110994309
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:prap03032]
    110994309
   03400 DNA repair and recombination proteins [BR:prap03400]
    110994309
Enzymes [BR:prap01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     110994309
DNA replication proteins [BR:prap03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    110994309
DNA repair and recombination proteins [BR:prap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      110994309
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE zf_DPOE_2 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 CAP-like_CFAP184
Other DBs
NCBI-GeneID: 110994309
NCBI-ProteinID: XP_045485974
LinkDB
Position
11:7887437..7914315
AA seq 2219 aa
MVLQNTGRFKSDKNETQKKEVGSSSGPREESSESRIRNALDNDRIDSKYGFDRVRDTKER
TGYLINMHTAEILDEDKRLVAAVDYYFIEMDGSRFKISLMFQPYFLIMARKECEQEVIQY
LSKKFAGTIHKIDVIEKEDLDLLNHLSGIKQRFIKLSFMSQNEMMKVRREILTAVNKNKE
REKKDAIYAEMLTNALTSAAAIEHAKKTTDHMENILDIREHDVPYHVRVSIDMQIFCGTW
YTVKPRGIETPIFTKRDDILERPDPIVLAFDIETTKLPLKFPDSQSDQIMMISYMIDGQG
YLITNREIISTDVEDFEYTPKPEFEGQFIIFNEANELGLIQKFFDHIMDVKPHIFVTYNG
DFFDWPFVEARAAILGLDMKQEIGFSKVTARDGTYACRPAMHMDCLCWVKRDSYLPVGSQ
GLKAVAKAKLRYDPVELDPEDMCRMAAEQPQVLSNYSVSDAVATYYLYMKYVHPFIFALC
TIIPLEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQVEELNKLTADGHVLETETYVGG
HVEALESGVFRADIKCKFRIVPSAVDKLIENVEKTMKHAIEVEEGIPLELVDNFDEVCGE
IKAKLQHMRDHPRRDENPLIYHLDVGAMYPNIILTNRLQPSAMVCPSVCAVCDYNRPGAD
CQRHMDWMWRGEYLPATRSEYQRIQQQLETEKFPPLNPGGPPRAFHSLPKEEQAAYEKRR
LADYCKVAYKKSKVTRMEVRKTTICQKENSFYVDTVRAFRDRRYEYKALNKQAKALVAAA
VASGDAAEVKSAKSREVLYDSLQLAHKCILNSFYGYVMRRGARWHSMEMAGIVCYTGANI
IMKAREIIEQIGRPLELDTDGIWCILPSSFPENVTVRSTHQKKKKINVSYPNAVLNAMVK
DQFTNDQYYELIDPAEKKYEKRAENSIFFEVDGPYLAMVLPASKEEGKRLKKRYAVFNFD
GSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGNDLKSCYSAVAKVADYWLDVLYSKGC
NMPDSELFELISENRSMSKKLEDYGGQKSTSISTAKRLAEFLGDQMVKDAGLACRFIISR
KPDGAPVTERAIPLAIFQSPAAVKRHHLRRWLKDNTISEDIDIRDVLDWAYYIERLSGAI
QKIITIPAAMQGLDNPVPRVQYPDWLHKKMLAKSDKFKTRKITDMFSVQPKEMAGSDEPS
TSHADPENTILDMEDIGKETRDKEIRPIVHTVKRKREESPVKEAASWREALGSPPPFGNT
KEERIAWIVFQKKKWKWQIEQRGRHNRNKKGKMDNMATLPKTVGASNTLGGFIKRAQRTL
LNTPWQIIQIAETAEPGLFRLWALVNNELHQIKLTVPRIFYVNRRVAIEETGQYYRKCSR
VLPRAHPAVHLYQYTVPEHLYREKRQELMSELSAPEIEGIYETQMSLEFRVLVQLGCICS
VDQQEARRLLQVGSNMDTFTLSQLQFKSVAHQAYLQKQDEISPIKHIFLYQHSAPNSSRS
MWSLILGPSKRAYIFVLDTVKTNQVPNMNTLYLAERTAKINLGTVESTIPSSELNWEVTV
ETEARAIYRGIQRALQRYRDEKFGPTVLALQTALSPAALTSLMPGLSDFPLVPLHIRDVE
SLYNTLEWQRIGARAIVRHYLNLDSVINLTIEQCRYFHVPIGNMPADPTLFGADLFYARH
LIKHNFVLWCSNLERPDLGGREIDDNRLVSEVEDSKSCAVGSSGAYGSVCVELDTDALCV
CALLQAHHILQVEGTSVATSFGAQHANIQDVMANTGSNATVNYDETAQCSAAFKILRTMI
ASWLRDVTLYKNVFADFQISHFYRWLKTPTSLLYDPALRRTLYNLMKKLFLMLIAEFKRL
GSQIVYADFNKIVLCTSKSTVIDGIGYVEFVVQSIRNKELFHGIDIRYKQCWSYLLWLDE
ANFAGIQGKLPEGLVEVGSSQVPKPDDEEPDHEKSITMQWNLAKFLPNGVREHFCTAIAG
FLSAAYEEPDNLAMLLATEMSQKLFQITEKIKSRMPILRISELENSPGLRAEALEGASPA
LLFVNALCKVLSLDQALDDQVTLLRRNLLRLINVGEFSSLAEWREASSSCVLCEVICKVC
NHCRDLDLCLDTHRSTLGEVPVCLCPTCETPYENQELEWRLIEILNRRAMSYTLQDLICA
RCHQVKRENLSVVCDCAGEFTLMIPASEIRSQLVTFETIAQYYQMPLLLEIIQFNLSNM
NT seq 6660 nt   +upstreamnt  +downstreamnt
atggttttacaaaatacaggtagatttaaaagcgacaaaaatgagactcaaaagaaagaa
gttggatcttcttcaggtcccagggaagaatcatctgagtcacgtattcgaaacgcatta
gacaatgatagaattgattctaagtatggtttcgacagagtacgagatactaaagagcgc
accggttacctaattaacatgcacacggctgaaatacttgatgaagacaagagattggtg
gctgctgtggattattactttatagaaatggatggttcaaggttcaaaatatcacttatg
tttcaaccctactttctaattatggcacgaaaggaatgtgagcaagaagtcattcaatat
ttatctaaaaagtttgctggcacaatacacaaaattgatgttatagaaaaggaagacttg
gatttgctcaaccatctgtctggtataaaacagcgttttataaagctctccttcatgtct
caaaatgagatgatgaaagtgagacgagaaattttaacagcagtaaataaaaacaaagaa
cgtgagaaaaaagatgcaatatatgctgaaatgttaacaaatgctctcacaagtgctgcg
gctattgaacatgctaaaaaaactacagatcatatggaaaatattcttgatatcagagaa
catgatgtaccataccatgtccgagtgtcaattgacatgcaaatattttgtggtacatgg
tatactgtcaagcccagaggaatagagactcccatatttacaaaaagagacgacatccta
gaaagaccagatccaatagttttagcatttgatatagaaaccaccaaactgccactgaaa
ttccctgattcacagtctgatcaaattatgatgatttcatatatgattgatggacagggg
tatttaattactaatagggaaattatatcaactgatgtagaggattttgaatacacacct
aaaccagaatttgaagggcaatttataatttttaatgaagcaaatgaattggggctaata
caaaagttttttgaccacatcatggatgttaaacctcatatttttgtgacatacaatggt
gactttttcgattggccatttgtggaggcccgagctgcaatccttggtctggatatgaag
caagagatcggtttcagcaaagttacagccagagatggcacatatgcctgcagacctgct
atgcatatggattgtttatgctgggtgaaaagagactcatatttgccagtgggatctcag
ggtctgaaggcggtcgctaaagccaaactgcgatatgatccagtcgagctcgaccctgaa
gatatgtgcagaatggcggctgaacaaccacaggtactatcaaactactctgtgtctgat
gcagtagcgacctactacctctacatgaagtatgttcatccatttatatttgcgttatgt
acaattatccctttggagccagatgaggtactacgcaaagggtcaggtacgctttgcgag
gcattactcatggtgcaggctttccatgcgaatatagtgtttccgaataagcaagttgag
gaattaaataagctgacagcagatggccatgtgttggaaactgaaacatacgtaggcggg
catgtcgaagcgttggagtccggagtattcagagccgatataaaatgcaaatttcgtata
gtaccatcggcggtggataaattaatagagaatgttgagaaaacaatgaaacatgctata
gaagttgaggaaggaattcctttggaactggttgataacttcgatgaggtctgtggggaa
attaaggctaaattgcagcatatgcgtgatcatcccagaagagatgaaaatccattgata
taccatttggatgttggtgctatgtatccgaatattattttgacgaatagattgcagccg
tccgccatggtctgcccaagtgtctgtgcagtgtgtgactataataggcctggagctgat
tgccaaagacatatggattggatgtggaggggagagtatttgccggctacgagaagtgag
tatcagcgcatccaacaacagctggaaactgagaaatttccacccttgaaccctggagga
cctccacgagcgtttcactcgctgccaaaagaggaacaggctgcctatgagaaaagacgt
ctagcggattactgtaaagtggcgtacaagaaaagcaaggtcacgcgcatggaagtccgc
aaaacaactatatgtcagaaggaaaattcattctatgttgatactgtgagagcctttaga
gaccggcgttacgaatacaaagctttaaacaaacaggccaaagcgctagtcgcggcggcg
gtggcgagcggagacgcggcggaggtaaagtcggctaagagtcgcgaagttttgtacgac
tcgctgcaattggcccacaaatgtatattgaactcgttctatggatatgttatgaggcga
ggcgcccgctggcatagtatggaaatggcgggaattgtttgttatacgggcgctaacatt
atcatgaaagcgagggaaatcattgaacaaatcggtcgacctttggaactggatacagac
ggtatttggtgtattctaccttcatcatttccggaaaatgtaactgtacgtagcactcat
caaaagaagaaaaaaatcaacgtttcataccctaatgcagttttaaatgctatggttaag
gatcagttcactaacgaccaatattacgaattaatcgatccagctgaaaaaaagtatgaa
aagcgcgcggaaaattcaattttcttcgaagtagatggaccgtatttggccatggtgttg
ccagcttcgaaagaagaggggaaaaggcttaagaagcgatatgctgttttcaattttgat
ggttctttggcggaattgaaaggttttgaagtaaaacgtcgaggtgagctgcaattaata
aaaatattccaatcttcagtgtttgaggcattcttaaaaggcaacgacttaaagtcatgt
tacagtgcagtcgctaaagtggccgattactggcttgacgtgttatacagtaaagggtgt
aatatgccggattcggaattgtttgaacttatttcggaaaatcgatctatgtcaaagaaa
ttggaggattatggtgggcagaaatcaacgtctatctcaactgcgaagagactggctgag
ttccttggagatcagatggttaaagatgctggcttggcttgtagattcataatatcacgt
aaaccagacggtgcgcccgtaaccgaacgtgcgatacctctagcgatattccaatcgcct
gccgccgtcaaacgacaccatttacgacgctggcttaaagacaatacgatatctgaagat
atagacataagagacgttctggactgggcatattatatcgagagattgagtggggccata
caaaagattattacgataccggctgctatgcaaggtttagacaaccctgtaccgcgagtg
caataccccgattggctgcacaagaagatgttagcgaaaagcgataaatttaaaaccagg
aaaatcacagacatgttcagtgtgcagcctaaagaaatggctggaagtgacgagccatct
acgagccatgccgatcccgagaatacaatactagatatggaagatatcggcaaagaaacc
agagataaggaaatacgtcccatagtgcatacggtgaaacgtaagagagaagaatctcca
gtaaaggaagctgcctcttggcgagaggcgttaggatcaccaccaccgtttggaaataca
aaggaagaacgtatagcgtggattgtcttccaaaagaaaaaatggaaatggcaaatagag
caaaggggtcgacataatcgaaacaaaaaaggtaaaatggataatatggcaacacttcct
aagacagttggtgcatcgaataccttaggaggttttattaaaagggcacagcgcacgttg
ctcaatactccttggcagattattcagatagcagaaacagcagagccgggtctattccgt
ctctgggctttagtgaacaacgagttgcatcaaattaagctgacagtaccgagaatattc
tacgtaaatcgccgagttgctatcgaagagaccggccagtactaccgtaaatgcagtcgc
gttctaccgcgagcacatcccgccgtacatctttatcagtatacagtgcctgagcatttg
tatagggagaagaggcaagaactcatgagcgaattgtctgcgccggagatagaaggaata
tatgagacccaaatgagtctggagtttagagttctcgtacaacttggatgtatttgcagt
gtggaccaacaagaagcaagaaggttacttcaggttggttcgaacatggatacatttacg
ttaagtcaactgcagtttaaaagtgtagcacatcaagcgtatttacaaaaacaggacgaa
atatcaccaataaagcacatattcctctatcagcactcggcaccgaactcaagtcgaagt
atgtggtcccttatacttggtcccagcaagcgggcgtatatctttgtattggatactgtt
aaaaccaatcaagtgcccaatatgaacaccctgtatctcgccgaaaggactgcgaaaata
aacctaggcacagtagagagcacgatacccagttcggagttaaattgggaagtaacagtg
gagacggaagcacgagctatttatcgcggtatacagagggctctgcagagatatcgagac
gagaagtttggtcctacagtactcgcgctacaaacggcactatcgcctgcagcgttgact
tcacttatgccaggtctatcggatttccccctggtgccgcttcacatacgggacgttgaa
tctctatacaacacgttggagtggcagcgaatcggcgcacgcgcaatcgtcagacattac
ctcaacttggactctgttataaatcttacaatcgaacaatgcagatacttccacgttccg
atcggaaacatgccagctgatccgacgttattcggtgcggatctgttctacgcacggcat
ctcataaagcataatttcgttctttggtgctctaacctcgaaaggccggatcttggaggc
agggagattgatgataataggttagttagtgaagtagaagacagtaaatcttgtgcggtt
ggttcgagtggtgcgtacgggagtgtgtgtgtagaactagacacagacgcgctgtgcgta
tgcgcattgttacaggcgcatcatatattacaggtggaaggtaccagtgttgccacatcg
tttggagcacagcacgctaacattcaggatgtaatggcaaatacaggttccaatgcaact
gttaactacgatgagacagcgcagtgtagcgcggcctttaagatattacgaacaatgatc
gcgtcttggctgcgtgacgtcacactgtacaagaacgtgttcgccgatttccaaatatcg
catttctacagatggctaaaaaccccaacatctctattatatgacccggcattacgacgt
actctatacaacctcatgaagaagctatttctcatgttaatagccgagttcaaacgtctc
ggctcgcagattgtgtacgcggacttcaacaaaatcgtactttgtaccagcaaaagtact
gtcatcgacggaattggttatgtggaattcgtggtacaaagcatcaggaataaggaatta
ttccacggcattgatattcggtacaaacagtgctggtcctatctcctatggctggatgaa
gccaactttgctggtatacagggtaaattaccagagggattagtggaagtgggttcatct
caagttccgaagcctgatgatgaggaaccggatcatgagaaatccataacaatgcaatgg
aacctggcaaaattcctgccgaatggcgttcgtgaacacttttgtacagcgatcgctggc
tttcttagtgcagcttatgaagaaccggataatctggccatgctactcgctactgagatg
tcgcaaaagcttttccaaataacggagaagataaagtcccgtatgcccatccttcgaatc
tctgagctggagaactcgcccgggttgagagcagaggcactcgaaggcgcttcgcccgcc
ttgctgtttgttaatgctctatgtaaggtgctctccttggaccaggcactggatgatcag
gtaacccttctccggcgtaacctgctccgtttgatcaatgttggcgaattcagctcgttg
gccgagtggcgggaagcatcttcgtcttgcgtcctctgcgaggttatctgcaaggtgtgc
aatcattgtagggacctggatctgtgtctggatacacatagatctacgctaggcgaagta
cctgtatgcctttgtcctacttgtgaaacaccatacgagaatcaagaattagaatggcgg
ttaattgagatattgaacagacgagctatgtcttacacattgcaggatttaatctgtgct
agatgtcatcaggtcaaacgggaaaacctatcagtagtatgtgactgtgctggagagttc
accttaatgataccagcaagtgaaataaggtcacaacttgtcacctttgagaccatagcg
cagtactatcaaatgcctttattgttagaaatcattcaatttaatttaagcaacatgtga

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