Pieris rapae (cabbage white): 110994488
Help
Entry
110994488 CDS
T05162
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110994488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prap03021
]
110994488
Enzymes [BR:
prap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110994488
Transcription machinery [BR:
prap03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
110994488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
110994488
NCBI-ProteinID:
XP_022116845
LinkDB
All DBs
Position
11:10087813..10109187
Genome browser
AA seq
1385 aa
AA seq
DB search
MPKEQYRETYVGKKISHVTFNVDSPSDIQLAAHIQVITKNLYTQDGQRVPATYGVLDRRM
GTNQKDANCETCGLGLADCVGHYGYIELALPVFHVGYFRSVITILQTICKTCAKVMLAEP
LKKSYRRKFMNPEISYLHKKNLRAAVLKKSKTCNKCPHCEALNGVVKKSSAGILKIVHEK
YRAKKPTDPLVKKVLSEFNEAKEANKEIAGIINSGLIIEMNPLEVQNLFRRIPDEDVPLL
GMSVKKSRPEDLILTRLPVPPLCIRPSVASDMKAGTNEDDLTMKQSEILLINDVIARHVA
SGGKSEMVQEDWDYLQLHCALYINSEMSGIPLSMQPKKPGRGLVQRLKGKQGRFRGNLSG
KRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRKLVCNGPDVHPGA
NYVQQRGFSHKKFLKYGNREKIAQELKCGDIVERHLVDGDVVLFNRQPSLHKLSIMCHRA
KVQPQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGNKSNLVTPRNGELL
IAATQDFITGGYLITQRDTFFTKAEAQQLASCLLAGPDCNMRIDMPPPAILKPRKLWTGK
QIFSLILRPNKICEVKANLETKGKNYTGNKDMCVQDSYVIIRNSELLCGSMDKSTLGSGT
KTSVFYILLRDWGEEYAVRGMWRLARMASYYMMNRGFSFGIIDVTPGKKLVEAKNKLLES
GYSKCDGYILEMEKGTLQCQPGCSMEETLEAVMLSELSSIRELAAKACFRELHPTNAPLI
MAQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDRSLPHFERHSKIPAARGFVENSFY
TGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLHYDMTVRNATSEVVQ
FQYGSDGLDPSYMEGKDRPVDLPRVLADVRAQCLDRDEEPLDGDGILVAAEETLALDDFK
NCTPDFKTELLTFLKTIADKVRILRAKYATCGLVSKQLERLTLTQLVRFLRVCHDKYQRS
VIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIINASKNISTPII
TAELTESYDQEFARRVKGRVEKTTLGEITHSIEEVYLPSSCFLLIRLDAERIRLLCLEVN
VHSIIYSICTSKLKIKQANIEPVSEWAIKVFAEPTKHCGWLNMALQQLARQLPAVIVKGL
PRVSRAVIACDDTASKARYKLCVEGDGLRDVIATYGVDGRKTSSNNILEVFQTLGIEAAV
STIISEIQGVMAGHGMSVDRRHVALLAAQMCARGEVLGITRYGLAKMKDSVLNLASFEKT
ADHLFDAAYYGQRDSIEGVSECIILGVPAAIGTGLLQLLHKHEQQQTRTKELLFDSPDLH
SSIWE
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagaacaatatcgagagacttatgtcggaaaaaaaatatcccatgtaacattt
aatgtagacagtccatctgatattcagctagcagctcacatacaagtgattacgaaaaac
ttgtatacacaagatggccaaagagtaccagctacatatggagtgctggatagaagaatg
ggaacaaatcaaaaagatgcaaattgtgagacatgtggtctgggattagcagattgtgtt
ggacactatggttacatagagctggctctaccagtatttcatgttggatatttcagatct
gttattactatactacagactatatgtaagacctgtgctaaagtaatgctggccgagcca
ctgaaaaaatcatacagaagaaaattcatgaatcctgaaatctcctatctgcataagaaa
aatcttagagcagcggtcttaaagaaatcgaagacatgtaacaaatgtccacactgtgaa
gcccttaatggtgttgttaaaaagagttctgccggtattttgaagatagttcatgagaag
tatagagctaaaaagcccacagatcctttggtgaagaaggttttaagcgagttcaatgaa
gcaaaagaagcaaataaggaaatagctgggataataaatagcggcttgattattgagatg
aatcccttggaggtgcaaaatttattccgacgtatccccgatgaagatgtacctctcctt
ggtatgagtgtcaaaaaatcccgacctgaagatcttattcttacaaggcttccagttccg
ccgctctgcatccgaccaagtgtagcttctgatatgaaggctggcactaacgaagacgac
ctaacaatgaaacagtccgagatcctcctaatcaatgacgtcatagctcgtcacgtggcc
agcggaggcaagtccgagatggtgcaagaggactgggattatttgcagctccattgcgca
ttgtatatcaacagcgagatgtccgggattcctttatcgatgcagccgaaaaaaccgggt
cgcggactagtgcagagactgaaaggcaagcagggaaggttccgaggaaatctatctgga
aagcgagttgacttttctagcagaactgttatttcgccagatcctaatctgcagatacag
gaggtcggagtcccggtgcacgtagcaaaaattcttacatatccagaacgtgtatttccg
gcgaatcttcagtggctccggaaactcgtttgtaacggaccggacgtacatcctggcgca
aattacgtacaacagcgtggattcagccacaaaaagttcctgaaatacggtaatagggag
aaaattgcgcaggagttgaagtgcggtgatatagtggagcgccatctcgtggacggagac
gtagtcttgttcaatcgccagccttctcttcataagctatccatcatgtgccaccgagcg
aaggttcaacctcagaggacattcaggtttaatgaatgtgtctgcacaccgtacaacgcg
gatttcgatggtgacgagatgaacatgcatttgccgcaaacggaggaggccagggccgaa
gcacttattctgatgggaaacaaatcaaacttagtaaccccaagaaatggagagcttctc
attgcagcaacccaagattttataacaggagggtatttgatcacccaaagggatacgttc
tttaccaaagccgaagctcagcagttagccagctgtcttctggcaggacctgactgtaat
atgaggatagatatgcctccaccagccattcttaagccgaggaagctttggactggtaaa
cagatatttagtctaatattgagaccaaacaagatatgcgaggtgaaagcaaacttagag
acgaaaggcaagaactatacggggaacaaggatatgtgtgtccaagactcgtatgtgata
atccgcaattctgagttactgtgtggatcgatggacaaaagcactttgggttctggtact
aaaaccagtgtcttctatatcctcttgcgggattggggagaagagtacgctgttaggggc
atgtggaggttagcccgaatggcgtcatactacatgatgaaccgcggattcagtttcggc
atcattgacgtgactccgggcaagaagctcgtggaagcgaaaaataaattacttgagtct
ggatactcaaaatgcgacggatatatcctggagatggagaaaggcactctgcagtgtcag
ccagggtgcagcatggaggagaccttggaagctgtcatgctgagtgagcttagcagcatt
agagagttagcggcgaaggcttgcttcagagagttacacccgacgaacgcacccctcatc
atggcccaaagtggatctaaaggttcgaacatcaatatatctcaaatgatcgcgtgcgta
ggtcaacaagctttgaatggcaaacgagtgccaaacggcttcgaagataggtcgttgcct
catttcgaaagacattcaaagataccagcggcccgaggcttcgttgaaaacagcttctac
actggcctcactcctaccgagttcttcttccacacgatgggaggtagagagggactggtc
gatactgctgtcaaaactgctgagactggatatctgcagaggagattggttaagtcccta
gaagacctggtactccactacgacatgacagtccgtaatgcgaccagcgaagtcgtacag
ttccagtacggcagtgatggactggatcccagttatatggagggaaaagacaggccggta
gacctgcccagggtgctggctgatgtccgcgcacagtgtttggatagggatgaagagcct
ctagacggagacggcattttggtggctgcagaggagacattggctttagacgattttaag
aactgcactcccgatttcaagactgaattgttaacgttccttaaaacgatagcggacaaa
gtacgcattttacgtgcgaagtacgcaacctgcgggctcgtgtcaaagcagttggagcgt
ttgacactgacgcaactggttcggttcttgcgcgtgtgtcacgacaaatatcaacggagc
gtcatcgaacctgggaccgctgttggagcgcttgcggcacagagtattggtgaaccggga
actcaaatgacgctgaaaactttccacttcgcgggtgtggcctccatgaacattacacag
ggtgttccccgtgttaaagaaatcattaacgcctctaaaaacatttctacacccattatc
acagccgagctgaccgaatcctacgaccaggagttcgctaggagagtcaaaggaagagtg
gagaagactacgttgggagagatcacccattcaattgaagaagtgtatcttccgtcatcg
tgtttcctcttaatcagacttgatgcggaacgtatccgccttctatgtttggaagtcaac
gtgcactctatcatttattctatctgcacgtcaaagttgaaaataaagcaggctaatatc
gagccggtgtcagaatgggccataaaagttttcgccgaaccgaccaaacactgcgggtgg
ttgaatatggcgttacagcaactggcgaggcaactgcccgcggtcattgttaagggattg
ccccgagttagtcgagcggttattgcctgtgacgacactgcgagtaaggcgagatataaa
ctatgcgtggaaggagacggcttgcgggacgtaatcgccacgtatggcgttgatgggagg
aagacgtcgtctaataatattctggaggtatttcaaaccctggggatcgaagccgcagta
tccaccatcatcagcgaaattcagggtgtgatggcaggtcacgggatgtccgtagacaga
cggcacgtggcccttctcgcggctcagatgtgcgcaaggggagaagtcctagggatcacc
agatacggtctcgccaagatgaaggactccgtgctcaatttggccagtttcgagaaaaca
gcagaccacctcttcgacgcagcatactacggtcagagggacagcatcgagggtgtctcc
gaatgcatcattctcggtgttcccgctgctatcggaaccggtttgctgcaattgctgcac
aaacacgagcagcaacagacgcggaccaaggagttgctgtttgattctccagatttgcat
tcttccatatgggaatag
DBGET
integrated database retrieval system
