Pieris rapae (cabbage white): 110994533
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Entry
110994533 CDS
T05162
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110994533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prap03041
]
110994533
Spliceosome [BR:
prap03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110994533
Complex C
U5 SnRNP specific factors
110994533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
110994533
NCBI-ProteinID:
XP_022116918
LinkDB
All DBs
Position
4:complement(2123482..2145409)
Genome browser
AA seq
2364 aa
AA seq
DB search
MSLPPYLLGPNPWATMMAQQQLAAAQQAALQAHAAAAAAAPPVPPAQPPKPHHIPEEKIK
EKATKWLQLQSKRFAEKRKFGFVDAQKEDMPPEHIRKIIRDHGDMTSRKYRHDKRVYLGA
LKYMPHAVMKLLENMPMPWEQIRDVQVLYHITGAITFVNEIPWVIEPVYIAQWGTMWIMM
RREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEPIQIELDPEEDGAVASWFYDHK
PLLGSIHVNGSTYRKWNLSLPQMATLYRLANQLLTDLVDDNYFYLFDSKSFFTAKALNMA
IPGGPKFEPLVKDNSAGDEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNLPHFVQLSWY
HTPNVVYIKTEDPDLPAFYFDPLINPISHRHSVKSLDPVPEEEDFVLPEEVSPFLQETAL
YTDNTANGIALLWAPRPFSMRSGRCRRAIDVPLVKTWYKEHCPPGQPVKVRVSYQKLLKY
YVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNL
NYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLNNVDSFQ
LADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVSKGPGCGFWAPG
WRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMHDI
VDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKMKADWWTNT
AHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTT
VHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDN
PHEALSRIKRHLLTQRTFREVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKR
RLLPPWVKPADTEPSPLLVYKWCQGINNLQDVWEVGEGECNVLLESRFEKLYEKIDLTLL
NRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVLDLLVL
GLQRASEMAGPPQLPNDFLAYQDRPVESAHPIRLYCRYVDRIHIFFRFSAEEARDLIQRY
LTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTIQWENS
FVSVYSKDNPNLLFNMAGFECRILPKCRSQNEELSHRDGVWNLQNEVTKERTAQCYLRVD
DESLARFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCEN
KIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHF
RSGMSHDEDQLIPNLYRYIQPWEAEFVDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWD
RGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTD
MIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRR
FTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESIVMDL
CQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSRPSLLADTKDTMD
NTTTQKYWLDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHS
AYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFS
NQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRL
GQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPF
QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNTERTKVL
LKPDKTTLTEPHHIWPTLSDDDWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILG
MEISAPSAQRQQIAEIEKQSKEQSQLTATTTRTVNKHGDEIITSTTSNYESQTFSSKTEW
RVRAISATNLHLRTNHIYVSSDDIKESGYTYILPKNLLKKFVTISDLRAQIACYLYGTSP
PDNPQVREVHCAVLPPQWGTHQTVHLPKHLPKHPALAHLQPLGWMHTQPNELPQLSPQDI
TAHAKIMADNQTWDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGVKNTDRGNNPKGYLP
SHYEKVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAH
FMNFAAMEDATAPTIAADREDHYA
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgccgccttacttattggggcccaacccctgggctaccatgatggcgcagcaa
cagctggcggcggcgcaacaggccgcgttacaagcacacgctgccgctgctgcagctgcg
ccgccggtccctccggctcaaccaccgaaacctcatcacattcccgaggagaagattaag
gaaaaggctacaaaatggcttcaacttcaatcaaagcgctttgccgaaaagcgcaaattt
ggttttgtggatgctcaaaaagaagatatgccaccagagcacatacggaaaatcatcaga
gaccacggtgatatgacaagtcgtaaatacagacatgacaagagagtgtaccttggagca
ttgaagtacatgccacatgctgtgatgaaattacttgagaacatgccaatgccatgggaa
caaatcagagatgtacaagttctataccacattacaggagccataacatttgttaatgaa
ataccctgggtaattgagcctgtatatattgcacaatggggcactatgtggattatgatg
aggcgtgaaaaaagagatcgtcgacactttaaacgaatgagatttccaccattcgatgat
gaagaacctccattagactatgctgataatatcttggatgttgagccccttgaacccatt
cagatagagttggatcctgaagaagatggggcagtagcttcatggttttatgaccacaaa
ccattattaggcagtatacatgttaatggatctacatacaggaaatggaatttgtcatta
ccacaaatggctacactttaccgtcttgcaaaccaactactgactgatttagtagatgac
aactacttttacttgtttgattcaaagagtttcttcactgcaaaagccttaaatatggcc
atacctggaggtccaaagtttgaacctctggtaaaagacaactctgctggagatgaagat
tggaatgaattcaatgatattaacaagatcatcatcagacagccaatcagaacagaatac
agaatagcattcccatacctctataacaatttgccacattttgttcaactgtcttggtac
cacacacccaatgttgtgtacatcaaaacagaagacccagacttgccagctttttacttt
gatcccctcatcaatccaatctcacacagacattcagtgaagtccttagaccctgtccct
gaagaggaagactttgttttacctgaggaagtctcaccattcttacaagaaacagcattg
tacactgacaacacagcaaatggtattgctctgctgtgggctccgaggcctttcagtatg
agatcaggtcgttgtcgccgggccattgacgtgcctcttgttaagacctggtacaaggaa
cactgccctcctggtcagcctgtgaaagtgcgagtctcatatcaaaagttgcttaagtac
tatgtgcttaatgcacttaaacatcgtccccccaagccgcagaaaaagaggtacttattc
cgttccttcaaatctaccaaattcttccaaacaacaaccttggattgggtagaggctggt
ctccaagtgtgtcgtcagggatacaacatgttgaatttactcatccatcggaagaacctt
aattatctacatttggactacaactttaatttgaaacctgtcaagacactcacaactaag
gagaggaagaagtctcgtttcggaaatgcattccatctttgtcgagaaatccttcgtttg
acaaaattaatagtggactcacacgtccaataccgtcttaacaacgtggactcattccaa
ctggctgatggtcttcagtacatttttgctcacgttggtcagctcactggaatgtacaga
tacaagtacaaactgatgaggcagatcaggatgtgcaaggacttgaagcatctgatatat
taccggtttaatactggcccagtatcaaagggtccaggatgcggtttctgggctccagga
tggcgtgtgtggctgttcttcatgagaggcatcacaccgctgttggagagatggcttggc
aacttattgtccagacaattcgaaggaagacactccaaaggtgttgctaaaactgtgacg
aagcagcgtgtggaatctcacttcgacctggagttgcgtgcgtctgtcatgcacgatatc
gtggatatgatgccagaaggaatcaagcagaataaggcgaggacaatattgcagcatctg
tccgaagcctggaggtgctggaaggcgaatattccttggaaggttccaggtcttccaacg
ccaatagaaaacatgattctccgatacgtgaaaatgaaggcggattggtggaccaacacg
gcccattacaatcgggaaagaattcgacgaggagccacagtagacaagaccgtatgcaag
aagaatttgggaagactgacgaggctgtatctgaaggctgaacaggagagacagcataat
tatttgaaggacggtccatacatctcacccgaagaagccgtagcgatatacacaacaaca
gtccattggcttgaatctcgtcgatttgcgcccatccccttcccgcccctttcatacaaa
cacgacacaaaactgctcattttagccttagaaaggctgaaagaggcgtacagtgtcaaa
tccaggctgaatcagagtcaaagggaggagttgggattgatagaacaggcctatgacaac
ccgcacgaagcattgtcgagaatcaagagacatttgcttacacaaagaactttcagagag
gttggtatagaattcatggatctatactcacatctagtccctgtgtatgatgtggaacct
ttggagaagatcacagacgcatatttagaccaatatctgtggtatgaagcggataaacga
aggttgctgccgccatgggtcaaaccggctgacacagagccttcgccgctactggtttat
aaatggtgtcaaggtattaacaatcttcaagatgtatgggaagttggtgaaggagaatgt
aatgtacttctggagtctcgctttgaaaaactctatgaaaagatcgatctgacgcttctc
aacagactgcttcggttgatagtggaccacaatattgcagattatatgactgctaagaat
aacgtcgttatcaattataaggacatgaatcacacaaactcatatggtatcatccgcggt
ctgcaattcgcctcattcatagtccaatactatggtctagtactagatctgctagtccta
ggtctccaaagggctagtgaaatggccggacctccacaattgccaaatgacttcctggct
tatcaagatcgtcctgtggagtcagctcatccaattagactgtattgcagatatgtcgat
cggattcatatattctttagattttcggctgaagaagcccgggatctcattcaaagatac
ctaacagagcatccagatccgaacaatgaaaacattgtcgggtacaataataagaagtgc
tggcccagagatgctcggatgaggctcatgaaacatgacgttaatttgggtcgagcggta
ttttgggatattaagaaccgtttgcctcgttccgtgacaaccattcagtgggagaacagc
ttcgtctcagtttattctaaagacaatcccaatttactcttcaacatggccggcttcgaa
tgtaggatactgcctaaatgccgcagtcaaaatgaggaactgtcccaccgtgacggtgtg
tggaacttacagaacgaagtgacgaaagagcgaacagcgcaatgttatttgcgggttgac
gacgaatccttagcgagattccacaacagagtcaggcagattcttatggcctcaggttct
accacgttcaccaaaattgttaacaaatggaacaccgcgcttataggtttgatgacgtac
ttccgcgaagccgttgtaaacactcaagagttactcgatctattagtaaagtgtgaaaac
aagattcaaacgcgtatcaagatcggtctcaactccaaaatgccctcacgtttcccgccc
gtcgttttttacacgcccaaagagcttggcggtttgggaatgttgtctatgggtcacgtt
ctaataccacagtctgaccttcgctggtcgaaacaaacagacgtcggtatcactcacttc
cgttcgggtatgtcccacgacgaggaccagctcattcccaacttgtaccgatacattcaa
ccatgggaggctgaattcgtggactcacagcgtgtgtgggccgagtacgcacttaagagg
caggaggcgaacgcgcaaaaccgacgtctaacactcgaagatttagaagattcatgggac
agaggtattccgcgtatcaacacactcttccaaaaggacagacacacactcgcgtacgac
aagggctggcgtatacgtactgaattcaaacagtaccaggtattgaagcaaaatcccttc
tggtggacgcaccagcgtcacgatggtaaattatggaatctaaacaactacagaacggat
atgattcaagctcttggtggagtcgaaggaattctggaacatacgttattcaagggaaca
tatttccctacgtgggaaggtttgttctgggaaaaggcctctggattcgaggaatccatg
aagtacaagaagctcacaaacgctcaacgttccggtttgaaccagattccgaaccgtcgt
ttcacactttggtggtcgcctactattaaccgtgccaacgtgtacgtcggtttccaggtg
caactggatttaactggtattttcatgcacggaaagatcccaactctgaagatttcgctc
atccagatattcagagctcacttgtggcagaaggttcacgaatctattgtcatggacttg
tgtcaggtgttcgatcaagaactagatgcgttggaaatagagacggtacaaaaggaaacc
attcacccgaggaagtcatataagatgaactcatcctgtgctgatatacttctgttctct
gcttacaagtggaatgtatccaggccatcgcttctagcagataccaaggacacaatggac
aacacaacaactcaaaagtactggttggacatacaactccgttggggtgattacgactcc
cacgacattgagcgttacgcacgagccaagttcctcgactacactacagataacatgtca
atttatccctcacccactggcctgctaattgccattgatttggcctataatctccacagt
gcatatggcaactggttccctggctgcaagcccctcatacaacaggccatggcgaagata
atgaaggcaaatcccgctctttatgtactaagggagagaataagaaaagctctccagtta
tactcttcagaaccaacggagccatacctctccagtcagaactatggagagctgttctct
aaccaaatcatttggttcgtggatgacacaaatgtataccgtgtgaccattcacaagact
ttcgaaggcaacttaaccacgaaaccaataaacggcgccatcttcatcttcaatccgcgc
acgggacagctcttcctcaagattattcacactagtgtatgggctggacaaaaacgtctt
ggacagctcgctaaatggaagactgctgaagaagtcgctgctttgattcgttccctaccc
gttgaagaacaacctaaacagattattgtcacaagaaagggaatgttggatccacttgag
gtacacttgcttgatttccccaacattgtgataaagggctctgagctccaactgccattc
caagcgtgtctcaaagtagagaagttcggtgatctcatcctgaaagccactgaaccgcag
atggtcctgttcaacttgtatgacgattggctaaagactatatcttcttacactgccttc
agtcgtctcatccttatcctacgagcgttgcacgtgaacactgaacgtacaaaagtcctc
ctaaaaccagacaaaacaacactgacggagcctcatcacatttggcccacgctttctgac
gatgactggatcaaggtggaagttcagctcaaagaccttattctggccgattatggaaag
aaaaacaacgttaatgtggcatcgctcacccaatctgagattcgtgacatcatcctcggt
atggagatatcggcgccctctgcccaacgacaacagatagcagagatagagaagcagagc
aaggagcagagtcagctcactgccactaccacacgcacggttaataagcacggagacgag
atcattacttccaccactagcaactacgagtcgcagaccttcagttcaaagacggaatgg
cgtgtgcgtgcaatatcggcaacgaatcttcatctacgtacaaaccatatttacgttagc
tctgatgacatcaaggagagtggttacacttacatcttaccaaagaacctgcttaaaaaa
ttcgtcactatatcggatttaagagctcagatcgcctgctatctctacggtacatctccc
cccgataatccacaagtacgcgaagtccactgtgctgtacttcccccgcagtggggtact
caccagacggtgcatcttcctaaacacttgcccaaacatccggcgcttgcgcacttgcaa
ccattgggatggatgcatacacaacccaatgaattgccacagttgtcgccacaggacata
acagcacatgccaaaataatggctgacaatcaaacatgggacggtgagaagaccatcata
atcacgtgttcgtttacacctggatcgtgttcgctaacagcgtataaattgacacctagc
ggttacgaatggggggttaagaatactgacagaggaaataaccccaaaggttatttgccc
agtcattatgagaaagttcaaatgttgctgtcggacagattcctcggttacttcatggtg
ccatcacaaggcagttggaattataacttcatgggtgtccggcacgatcccaacatgaaa
tacggcgtacaacttggcaatccacgtgaattctatcacgaagtacaccgaccggctcac
tttatgaactttgcggcgatggaagatgccactgcaccgaccatagcggctgatagggag
gaccactatgcttaa
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integrated database retrieval system
