Pieris rapae (cabbage white): 110994557
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Entry
110994557 CDS
T05162
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prap03021
]
110994557
03036 Chromosome and associated proteins [BR:
prap03036
]
110994557
Transcription machinery [BR:
prap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110994557
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
110994557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
HHH_3
SH2
Spt6_S1
HHH_9
Tex_N
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
110994557
NCBI-ProteinID:
XP_022116951
LinkDB
All DBs
Position
4:complement(2444625..2467071)
Genome browser
AA seq
1705 aa
AA seq
DB search
MADFLESEAEESELDSEDEKPAERKKPKRKAAVQSDDEDEEEDDDEERLREELKDLIDDA
PIEESGSDGEDSDASVGPKKRKKSDDELDDRLEDEDYDLIEENLGVKVARNKFKRLRRLE
DDDSDNEGNDDPDLEREVIAEKLFVAGSDEEEENRSEPGPAREMEYDDDNEDMESDADDF
IVDDDGRPIAERKKKRKPIFTDASLQEGQDIFGVDFDYDEFEKYGDEDYDEEDEEDLDEY
IEDEEEDGERRRTKKGKAKRPSKKSIFEIYEPSELKRSHFTDLDNEIRKTDVPERMQIRE
VPITPVEEGSTELEEEAEWIYKQAFLKPPVSKADSQEARERSRRGPSTVVKIRQALDFMR
NQTLEVPFIAFYRKEYVQPELSINDLWKVYKYDAKWCQLKQRKENLLKLLENMREFQMDK
VMLNPDAPIPDTMRLIKDEDIERLKNVQTPEELRDVHTHFLLYYSHDLPEMQKVQRGKER
KAEIEEKKKYAREEAEKNGEDPDEAAAAVEAAMPDDEETTEVKYAVRSGPYELCRKAGLE
PLVRKFGLSAEQFAENVRDNYQRHEVEQPAVPPLEAAQEYTPTGGSSGEVLRRAVYMCGV
QLAREPLLRSTLRDTLRERATITVRPTTKGLKMIDESHSCFGLKYLNKKPVRDLTGDQFL
KLTMAAEDKLLELNISENLEGNTGPSYLEELKQLYQKDEFAATVQAWNDIRIEAVTLALT
KIVMPELRRELQALLLQESKEYVLKCCRRRLYDWLKVAPYESRVSDDDDEEWDASNGVRI
VSIAYVPDRAHCAFACSIVGGGEVADHLRLPHLLYRRNAWDPIERQNKEADLTALRRFIL
RKKPHVIVIGGESREALNIKADVSECIQQLIEDEQFPRIPIEIADNHISKIYSNSIRGRN
DFREYPDVLRQAICQARLLQDPLMEISQLCGPDEEILCLRYHPLQDQITKEDLLEGIELE
FVNRVNEVGVDVNEAVLTGRGTELLQFVCGLGPRKAQALIKLFKQTNQKLENRTQLVTVC
HMGPKVFINCSGFIKIDTSSLGDSTEAYIEVLDGSRVHPETYEWARKMAVDALEYEDEDA
NPAGALEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNSRYKDLRVSYRS
TTPEEMFDILTKESPETFFVGKMVLASVVGITHRKPQREMLDQANPVRNDETGLWECPFC
HKNDFPELSEVWNHFDAGACPGQATGVRIRLDNGLSGYIHIKNLSDRHVTDPTERVRIGQ
TIHCRVLKIDVERFSVDCSSKSSDLLDKNNEWRPAKDPYYDQETEEKDLRKDKEAKQTKE
RMQYVKRVIVHPSFRNISFAEAEKLMEKMAQGEVIVRPSSKGSDHLTVTWKVAEGICQHI
DVREEGKENAFSLGRSLWIQGSEFEDLDEIIARYVTPMAGHARDLIAYKYYKPLGGMRDK
AEELLKEEKSKNANKIHYIVSAAKNHPGRFLLSYLPRNKCTHEYVSVTPDGYKFRQRMFD
SLGSLLKWFKEHFRDPPPSGTPAQRTPALRTPHGGMTSTMYHTPAAHTPAFHTPAHTPGP
AYINTPYTPSAQTPYMTPFATTPRQPDFLTPVIPRHKQLPVFTEPSDWQKAAEDWVRHRT
VRDTPATPRSSEGMSTPRQSRTPRMDSRSTPRHDMRSTPRHDARSTPHGHSGRSSRAHSV
RSTPHTNTSPRSMSLGDATPLYDEN
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttctcgagtctgaagccgaagaaagcgagttggattctgaagatgagaag
cctgcagaaagaaagaaaccaaaacgtaaagctgctgtacaaagtgacgacgaagatgaa
gaagaggatgatgatgaggaacggcttcgagaagaattaaaagatctcatagatgatgca
ccaatagaagaatctgggagtgatggtgaagattcagatgcaagtgtgggtcctaaaaaa
agaaaaaaaagtgacgatgaattagatgataggcttgaagatgaagattatgatttgatt
gaggaaaatcttggtgtgaaagttgccaggaataaatttaaacgtctgaggcgattggaa
gatgatgatagtgacaatgaaggaaatgatgatcctgatttagagagagaagttattgct
gagaagctgtttgttgcaggatcagatgaggaagaagaaaatcgttcagaaccgggacct
gcaagagaaatggaatatgatgatgacaatgaggacatggaatcagatgctgacgacttc
attgttgatgatgatggtagaccaattgcagagagaaagaaaaaacgcaagcctatattc
actgatgcttctcttcaagagggccaagatatatttggggtggactttgactatgatgaa
tttgagaagtatggtgatgaagactatgatgaagaagatgaagaggatttggatgaatat
atagaagacgaggaggaggatggtgaaagacgtagaaccaaaaaaggaaaagctaagcgg
cccagcaagaagtcaatatttgaaatctatgagccgagtgagttgaagagaagtcacttc
actgatttggataatgagatacgtaaaacagacgtaccggagcgtatgcaaatacgtgaa
gtacccatcacgcccgtagaagagggcagtactgagttagaggaagaggcagaatggatt
tacaaacaggctttcttgaaaccgcctgtgtccaaggctgattctcaagaggctagggag
agatcaagacgtggcccaagtacagtggtgaaaattcgacaggctttggactttatgagg
aatcaaacattggaagtaccattcatagcattctatagaaaggagtatgtgcagcctgaa
ttgagtatcaacgatctatggaaagtgtataaatatgatgccaagtggtgtcaattaaag
cagcgtaaagaaaatctgttgaaattgttggaaaatatgcgtgaattccaaatggataaa
gtgatgctgaaccccgatgcgcctattccagacactatgagactcattaaggatgaagat
attgaaaggttaaaaaatgtgcaaacacctgaagaattacgcgatgttcacacacatttc
ctgttgtactactcgcatgacctacctgaaatgcagaaagtgcaacgcggcaaagaaagg
aaggcagagattgaagagaaaaagaaatatgcccgtgaagaagcagaaaagaacggcgaa
gacccagacgaggcggcagcggcggtggaagctgcgatgcctgacgatgaagagaccact
gaagtgaagtatgcggttcgatcggggccttatgaactatgcagaaaggcaggacttgaa
ccactagtgcgaaaattcggtctgtcagccgaacaatttgctgagaacgtgcgtgataac
tatcagagacacgaggtagaacaacccgctgttccgcctttggaggctgcccaagaatat
accccaacgggcgggtcatctggtgaagtgttacgtcgtgctgtgtacatgtgcggggtc
caattggcacgtgagcccctacttcgctctaccctgagggacactttacgggaaagggcc
actattaccgttagacccacaaccaagggtctgaagatgattgatgagagtcactcctgt
tttggtttaaaatacctgaataagaaaccggttcgcgatttgactggagatcagttcctg
aaactgacaatggctgcggaagacaagttgttggaactcaacatcagcgagaatcttgaa
ggcaacactggccccagttatttggaagagttgaagcagttatatcagaaggatgaattt
gcggcaacagtacaggcctggaacgatattcgaatcgaagcagtcacattggctttgact
aaaattgttatgcctgaactgagacgggagttgcaggctcttctcttgcaggaatctaag
gaatatgtactgaaatgctgcagacggcggttatatgattggctcaaagtggcaccttac
gaatcccgagtctctgatgatgatgatgaagaatgggatgcgtctaatggtgtacgcatt
gtatcgatagcgtacgtaccggaccgtgcgcactgtgcgttcgcgtgttcgatagtggga
ggaggcgaagtcgccgatcatttacgtctaccgcacttgttgtatcgccgaaacgcttgg
gatcctattgagaggcagaacaaagaggccgacctcaccgcacttaggagattcattctt
cgcaaaaaacctcacgtgatagtgatagggggtgaatctcgtgaggctctcaatatcaaa
gcggacgtctccgagtgcattcaacagttgattgaggatgagcagtttcccaggatacct
atagagatagcagacaaccatattagcaagatttacagtaatagtatacgaggaaggaat
gacttcagggaatatcccgacgtactgagacaagcgatatgccaagcccgattgttacaa
gacccacttatggagatttcacagctttgtggacctgatgaggaaatactctgccttcgg
taccaccccctacaagatcagataactaaagaggaccttcttgaaggaatagaactggaa
ttcgtcaacagagtcaatgaagtcggcgtggacgtcaacgaagcggtgttaacggggcga
gggaccgaactcctccaatttgtctgtggtttaggaccaagaaaagctcaggccctgata
aagctcttcaaacagaccaatcaaaagctagaaaatcgtacgcaactggtgacagtgtgt
cacatgggaccgaaagtgtttatcaactgttctggattcatcaaaattgacacaagtagc
cttggagatagtacagaggcgtatatagaagttctggacgggtcaagagtgcatccagaa
acatatgagtgggcgaggaagatggcagtggatgccctggaatatgaagacgaagacgcc
aatcctgcgggagcactggaagagatcctggaggccccggagaggttgaaagatctggat
ttagatgcgtttgccgaggagttggaaagacagggcttcggtaataagagtatcacgctg
tatgacatccgagcggagttaaattctaggtacaaagatctcagagtatcctacagatcg
acgactcctgaagagatgttcgatatcctaaccaaagaatcgccggaaaccttttttgtg
ggaaagatggtattggccagtgtggttggaatcactcacagaaaacctcaacgggagatg
ttggatcaggccaatcctgtgaggaatgatgagacaggcctttgggaatgccccttctgt
cataagaatgactttcctgagctttctgaggtatggaatcacttcgacgcaggcgcgtgt
ccgggtcaagcgacgggcgtacgtatacgtctcgacaacggactttccggatacattcat
atcaagaacttatcggaccgacacgtaacagatccaacggaacgcgtacgaatcggacag
acgatacattgtcgagtgctcaagatagatgtcgaacgattctcggtcgattgctcttct
aagtcgtccgatttgctcgataaaaataacgagtggagaccagcgaaagatccctactac
gatcaagaaacagaagagaaagacttgcgaaaggacaaggaggcaaaacaaactaaggag
cgaatgcaatacgtgaaaagagttatagtgcacccatcatttagaaatatatctttcgcc
gaagctgaaaaacttatggagaaaatggcacaaggagaagttattgtgagacctagtagt
aagggatctgaccatctcacggtgacgtggaaggtagcggagggcatttgccaacacatt
gacgtacgagaggaaggcaaagaaaatgcgttttcgttaggtcgcagtctctggatacag
ggttcagaattcgaagacttagatgaaattatagctagatatgtaactccaatggcgggt
cacgcgcgagatctcattgcatacaaatattacaaacctttaggcggcatgcgagacaaa
gccgaagagttgctgaaagaagaaaaatctaaaaacgctaataaaatccactacatcgtc
tcggcggctaagaatcatcccggcagattccttctctcttacctgccgcgaaataaatgt
acgcacgagtacgtatcggtcacgccagacggatacaaattcagacagagaatgttcgat
tcgctggggagtctcttaaaatggttcaaagaacacttcagagatccacccccaagtggt
actccagcgcagaggacgccagctctgcgaacaccacacggcgggatgacgtctacaatg
tatcacacaccagccgctcacacgcccgccttccacactccagcgcacacacccggcccg
gcatacattaacacaccatacacaccatcagctcaaacaccttacatgacaccgttcgcc
accactcccaggcagccagacttcctaacgccagtcataccgcgacacaagcagcttcca
gtatttacggagccgtcggactggcaaaaggccgccgaagactgggtcagacatcggacc
gttagagacacccctgcaacccctcgtagtagcgaaggtatgtcgactccgcgacagtct
cgcacgcccagaatggactcgagatcaaccccccgacatgacatgagatctacccccaga
catgacgccaggagtaccccccacggccactctggaaggtcgtctagggcacactcggtg
cgttccaccccccacacaaatacgtcacccaggtcgatgtctctcggcgacgcaacaccg
ctctatgacgagaactag
DBGET
integrated database retrieval system
