Pieris rapae (cabbage white): 110994794
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Entry
110994794 CDS
T05162
Name
(RefSeq) thyroid receptor-interacting protein 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prap04131
]
110994794
Membrane trafficking [BR:
prap04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
110994794
Retrieval pathways
110994794
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCDC39
TolA_bind_tri
GRAB
NET2A_C
Rod_CreS
GRIP
ATG16
Rab11-FIP3
CCDC-167
HALZ
DUF3138
Motif
Other DBs
NCBI-GeneID:
110994794
NCBI-ProteinID:
XP_022117340
LinkDB
All DBs
Position
15:3863570..3902247
Genome browser
AA seq
1510 aa
AA seq
DB search
MSWLNLNQSLNSIKGQITNFATDVLTEAVGPLNEEVASRNESITNELNEKCEKQELEIAA
LKKLNDELQTSLQSERLSRKNGVKEEESNWYWDPPPQPSKPFDHEVEKQYKLQIQALQDE
ISSIKDRVINDSRPDNDEELNRLREENKNLTNSLEDLDCQHQTAMEKLLSLKKELQKNFE
LLKQEHEEMKYANVQYSEDNKHLRVQLNDRDKEIENMKTLHTDYETLHHKYQNLERIHSL
LRENAEKFQEENQELHEEVFKLQEQVTKLQHDIEVISKETEMSETVPKVKYEELQKKLQE
MQERRPTNQDHLDEINIDDNAKSVIETLKRDISDLKRKLAERENTDATDHKTVKPEKIMQ
LYNRYVNFDLPVDYVGEMPSVTDNIVLFKLESVFKTINAFKKEIETLEQKLSEKKLNISQ
LKTQMEDLTAENEYLTSDIQHFESELDEMKKNNDFLISEIAALKNTSKLQPIIETHEDNL
VKLESELADCNQINKTFESEIMRVEKELFEVKSEKIILQESLNDLRQKYTSMINELETCK
NETKAVEELENSTNVTQNAKLLKACDDIDDYKKRLSNATSKNEQLAIDLHIVENDKVLLI
KEVDELKNALVERSSSNKELESLKAVLDHKLKDVENKLDAMIKHKQDLENENMVLLEKVK
LLESEKKNQDDIENTRKQNSQLALEIDDLHKKNSNLLQQLNELRNEITLLGQEKDDLINE
NNSLKQNKVFENSNLTELKKITNSLQSKTDEFNTLSNEYLALKKENSNILENKAHVETEL
AKADVKILHMQEEFDKLISDLNVKDSIIDTLNNTLNQNQISLSTLSQNVADFDGNISLKN
AEIDRLQKSLQKVTDSLNKTIENSNHSHEELKKLHSEKEDINKQIYTLNDEIIAKNSDIT
KLTCRLEELDKVNTQYKLNLDNKDKEIKELRQSIVELTDKINLETTTVHNDVYAKLVEDK
VTIENKCAELNSILTSKENELSELNRKLNSLENTCSEYKLNIDKETAEKAELINLVSLKH
NESLQYHAEIQRLNHVILEQNTEFKKIFEEKDALLKNQTESCHNCENLLGTIKERDEAIV
LLNQSLSDYERLKAELTTATETMRNLTKNCEDLDKSLTIQLETVKKLTAENLQLSEKEQN
STRELERLRHHLMETEESYTQELMISEQKLTECQTRLHQVEERAKQTSTVYTSNSIRANQ
EVETLRNQIKLLEKQREDVQSKLSEADDVRSRSEAAITNLQVVLEQFQLDKERDIHAATE
RIRNKMDEIKRENQGLQEEIGRLKAKLEESIAGLQAAARLGDQVETKTAQINDLKEQVRT
LQTTIAAAEERYYNAISNQQDKVDKNLVKNLVINYVLTAGQNNLNRTQTLRILSTVLDFN
KQECERLGLVKSSTAPDSLAAEFVKFLQNESRPRPPLPDIMSMQARSSTPSTSRKSSTIG
PHPIFDLGHRRNPSTGSNNLLFQNLDSVETSSQKSAESESRVIQITTLDTGINQTRNNEG
AILKHVLKDI
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggcttaatttaaatcaaagcttgaacagtataaaaggacaaatcacgaatttt
gctacggatgttttaactgaggctgtcggaccactaaatgaagaagtggcttctcgaaat
gagtcaataactaacgagttaaacgaaaaatgtgaaaaacaagagctcgagattgctgca
ttaaagaagctgaatgatgaacttcaaacttccttgcaatctgagagactctcaagaaag
aatggtgtcaaagaagaagaatccaactggtattgggatccaccgcctcagccttcgaaa
cccttcgaccatgaagtggaaaaacagtataaattacaaattcaagcattacaagacgaa
atatcctccataaaagatcgggtcatcaatgatagtagacctgataatgatgaggaactg
aacagacttcgcgaagaaaataaaaacctcacgaatagcttagaagacttggattgtcaa
caccaaacagctatggaaaaacttctgtcccttaaaaaagagttacagaaaaattttgag
cttctaaagcaagaacacgaagaaatgaaatatgccaacgttcagtattcggaagataac
aaacatttacgagtgcaattgaatgatagagataaagagatagagaatatgaaaacttta
cacactgattatgaaacgcttcatcacaaataccaaaatttagaaagaatacacagctta
ctaagagagaacgcagaaaaatttcaagaagaaaaccaagagctccacgaagaggtgttt
aaattgcaagaacaagttacaaaattgcaacatgatattgaagtcatctcgaaagagacg
gaaatgtctgaaactgttcctaaagtaaaatacgaagaactgcaaaaaaagttacaagaa
atgcaagaaaggcgaccgactaatcaagatcatttagacgaaataaacatcgatgataac
gcaaaaagtgtcatagaaaccctgaaacgtgacatcagcgatctgaaacgtaaattggcg
gaacgtgaaaatacggatgcaacagatcataaaacagttaagcccgaaaaaataatgcaa
ctttataatcgctatgttaattttgatttaccagttgattatgttggggagatgccatct
gtaacagataatatagtactgttcaagttggaaagtgtatttaaaactattaacgcattt
aaaaaagaaattgaaacgttagaacaaaaattatcagaaaagaagcttaacattagccaa
ttaaagacgcaaatggaagatctgactgcggaaaatgaatatctgacatcagatatccag
cattttgaaagtgaattagatgaaatgaaaaagaacaacgattttctcatttcagaaata
gctgcccttaaaaacacttccaaacttcaaccaataatagagacacacgaagataatttg
gttaagttagaaagtgaattggctgattgtaatcaaataaataaaacatttgaatcagaa
ataatgagagtagagaaggaattgtttgaagtaaagtcagaaaaaatcattctacaagaa
agtttaaatgatttgcgacaaaaatatacatcaatgataaatgaattagaaacttgcaaa
aatgaaacaaaagccgtagaagagcttgaaaacagcactaacgttacccaaaatgcaaaa
ctcttaaaagcatgtgatgatattgatgattataaaaaacgattatcaaatgctacttca
aaaaacgaacaactcgctattgatttacatattgtcgaaaatgacaaggtgttactcata
aaagaggtagatgaattaaaaaatgcgttagtggaaaggtcttcttcaaataaagagtta
gaatctttaaaagctgttttagaccataagttaaaagacgtagaaaacaaattagacgcc
atgataaaacataagcaagatctagaaaatgaaaacatggtgctattggaaaaagtgaaa
ttattggagtcagaaaagaaaaatcaggatgatattgagaacacacgtaaacaaaatagt
caactagcgcttgaaattgatgacctgcacaaaaaaaactcaaatcttttgcaacagttg
aatgaactacgtaatgaaattacacttctgggacaagaaaaagatgatcttatcaatgaa
aataactcacttaaacaaaataaagtatttgaaaatagtaatcttacagagctgaagaaa
ataacgaactcactgcagagtaaaactgatgaatttaacaccctaagtaatgagtactta
gcgttaaagaaagaaaatagcaatatccttgaaaataaggcgcacgttgaaacagagttg
gccaaagctgatgttaaaattctacacatgcaagaagaatttgataaattaatatctgac
ttaaatgttaaagattctattattgatacattaaataatactttaaatcagaatcaaatc
tcgctatctacactaagtcaaaatgttgccgattttgacggtaacatttcccttaaaaat
gcagaaatagatcgactacaaaaatctttgcagaaagttaccgacagccttaataaaaca
attgaaaactcaaaccatagccatgaagagcttaaaaaattacattctgaaaaggaagac
attaataaacaaatatatactttaaatgatgaaatcatcgccaaaaattcggacataacg
aaattaacttgccgacttgaagaacttgataaagtgaacacacagtacaaattaaattta
gataataaagataaagaaatcaaagagttgcggcaatcaatcgttgaattaactgataaa
atcaatttagaaacaaccaccgttcataacgatgtatatgcaaaattggttgaagataaa
gtaactattgaaaacaaatgtgctgaacttaacagcatcttaacgtcgaaagaaaatgaa
ttatcagaattaaatcggaagcttaattcattagaaaatacgtgttcagaatataaacta
aatatcgataaagaaacagctgaaaaagcggagttaattaacctggtaagccttaaacat
aatgaaagtcttcaatatcatgcagaaatacagcgtttaaaccatgttatattagaacaa
aatactgagttcaaaaaaatatttgaagaaaaagatgcattacttaaaaatcaaaccgag
agttgtcataactgtgagaatttactgggtacaattaaagaaagagacgaagctatagta
ttgttgaatcagtcattaagcgattacgaaagattgaaagcagaattaacaactgctacg
gaaacgatgcgtaatttaactaagaattgcgaagatttggacaaaagcttaactattcag
ttggagaccgtaaagaaattgacagcagaaaatttacagttgtcagaaaaagagcaaaac
tcgacgcgggagttggagcgtttacgtcatcacctgatggagacagaggagagttacaca
caggagctgatgatatcggagcagaaactaacggagtgtcagacgagattacaccaagtt
gaagaacgggcgaagcagactagtactgtatatactagtaatagcattcgagccaatcaa
gaagttgagacgcttaggaatcaaatcaaactattagaaaagcaacgagaggatgttcag
tccaagttaagtgaagccgatgacgtgagaagtcggagtgaagcggccattacgaacctt
caagtggttttagaacaatttcaattagacaaagaacgagacatacacgctgcgactgag
cgaataagaaataaaatggatgagattaaaagggaaaatcagggtttacaggaagaaatc
ggtcgactcaaagctaaattggaagaatccatcgctggtctacaggcggctgctaggctt
ggagatcaggtcgaaactaagacagctcaaattaatgatttgaaagaacaagtacgtaca
ttacaaacaacgatagcggcggcagaggagcgatactataacgcaatatcgaaccagcag
gacaaagtcgacaaaaaccttgtaaagaatctggtcatcaattacgtgcttaccgcggga
caaaacaatttgaacaggacacaaactctacgtatcctatcaacggtcctagactttaac
aaacaggaatgcgagaggctaggcctggttaaatccagtacagcaccagatagtctagct
gctgaatttgttaagttcttgcaaaatgagtcaaggccccgaccacctttgccggatatt
atgagtatgcaggctcgaagctctacgccgagtacgtcaaggaaaagctcgactattggt
ccacatccaatctttgatctcggccacagacgcaacccatcgacaggctccaacaatctg
cttttccagaatttagattctgtggaaacatcctcgcagaaatctgcggaatctgaatcc
agggttatacaaataacaacgttggatacagggataaaccaaaccagaaataatgagggc
gccattttgaaacatgttttaaaagatatataa
DBGET
integrated database retrieval system
