KEGG   Pieris rapae (cabbage white): 110995094
Entry
110995094         CDS       T05162                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03030  DNA replication
prap03410  Base excision repair
prap03420  Nucleotide excision repair
prap03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110995094
   03410 Base excision repair
    110995094
   03420 Nucleotide excision repair
    110995094
   03430 Mismatch repair
    110995094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:prap03032]
    110995094
   03036 Chromosome and associated proteins [BR:prap03036]
    110995094
   03400 DNA repair and recombination proteins [BR:prap03400]
    110995094
DNA replication proteins [BR:prap03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110995094
  DNA Replication Termination Factors
   ELG1-RFC complex
    110995094
Chromosome and associated proteins [BR:prap03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    110995094
DNA repair and recombination proteins [BR:prap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110995094
  Check point factors
   HRAD17(Rad24)-RFC complex
    110995094
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_14 AAA_assoc_2 AAA_22 RuvB_N AAA_11 DUF815 AAA_16 AAA_5 AAA_7 AAA_30 PhoH DEAD ResIII AAA_19 Gp44_lid Mg_chelatase DUF7632 AAA_24 Sigma54_activ_2 bpMoxR LisH_TPL TIP49
Other DBs
NCBI-GeneID: 110995094
NCBI-ProteinID: XP_022117780
LinkDB
Position
4:complement(3406688..3412047)
AA seq 333 aa
MTVGQTAINLPWVEKYRPSKLDDLVSHDDIVKTINQFMKENQLPHLLFYGPPGTGKTSTI
LACAKQMYTPQQFNSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM
TNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLQQSQIVPRLQEIV
EKEGVKISEDGIKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRSDINSI
LNWLLNENDFATSFQHIQDLKIAKGLALGDILTEIHTIITRLKLPPEVFISLLIKMADSE
ARLASGCSERIELAALIAAFQQAREQVNINDLL
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgactgttggacagacggcaataaatttgccatgggtagaaaagtatcgaccatcaaaa
ttagacgatttggtttcgcatgatgatattgttaaaactattaaccaatttatgaaagaa
aaccaactacctcacttattgttttatggccctccaggcacaggaaagacatccacaata
ctggcttgtgctaaacagatgtacacaccccaacaatttaattcaatggttttagaatta
aatgcttctgatgatcgaggtattggaattgtaagaggccaaatattaagttttgcttca
acaagaacaatctttaaagcaggacccaaacttattattcttgatgaagctgatgctatg
accaatgatgctcaaaatgctttgagaagaattatcgagaagtatacagaaaatgtgaga
ttttgcattatttgcaattatttgggtaaaataataccagcgctgcagtcgcgatgcaca
cgttttcgtttcgcaccacttcagcagagtcagatagtccctcgattacaggaaattgtt
gaaaaagagggggtaaaaatttcagaggacggcataaaagcgttattgacactctcaggt
ggggatatgcgaaaagtattaaacacattacaaagcacttggctggcgtatcgtgacgtc
acggaggataatgtctacacttgtgttggtcatcctctccggtcggacataaatagcata
ctgaattggctacttaatgagaatgatttcgctacctcatttcaacacatccaggatttg
aaaattgcgaaaggtttagcgctgggcgacatattgacggagatacacaccataattaca
agattaaaactacccccagaggtgttcatatccttgttaataaagatggcggattcggaa
gcgcgtcttgcgagcggatgtagtgaacgaatagaactggcagcccttatcgccgctttt
cagcaggccagagaacaagtcaatataaacgacttactctaa

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