Pieris rapae (cabbage white): 110995432
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Entry
110995432 CDS
T05162
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
KO
K10752
histone-binding protein RBBP4
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03082
ATP-dependent chromatin remodeling
prap03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110995432
03083 Polycomb repressive complex
110995432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prap03036
]
110995432
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110995432
Histone modification proteins
HAT complexes
HATB complex
110995432
HDAC complexes
Sin3A-HDAC complex
110995432
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110995432
PRC2.2
110995432
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110995432
Heterochromatin formation proteins
Other heterochromatin formation proteins
110995432
Chromatin remodeling factors
NuRD complex
110995432
NuRF complex
110995432
NuRF complex (fruit fly)
110995432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_SPT8
MIOS_WD40
NBCH_WD40
Beta-prop_DCAF4
YqbF
Motif
Other DBs
NCBI-GeneID:
110995432
NCBI-ProteinID:
XP_022118288
LinkDB
All DBs
Position
21:2535368..2541241
Genome browser
AA seq
432 aa
AA seq
DB search
MGDKGDGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEG
KDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNDKGEFGGFGSVSGKIDIE
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPEPSGECHPDLRLRGHQK
EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEGRVIEAKSVFTGHTAVVEDVAWHLL
HESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQTAED
AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPA
SELESSVNVNHG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataaaggtgatggagaaacatttgatgatgctgtcgaagaaagagttattaac
gaagaatataaaatatggaaaaagaacaccccgtttctttacgatctggttatgacccat
gccctagaatggccttctttaaccgctcagtggcttcccgacgtaaccagaccagaagga
aaagattactctgtacacagacttatcttgggcacacacacatctgatgaacagaaccat
ttgcttattgcaagtgttcaactaccaaatgaagatgcacaatttgatgctagtcattat
gataatgacaaaggagagtttggtggcttcggttcagtctcaggaaagatagatatagaa
attaaaataaatcatgaaggtgaagtgaacagggctcgttatatgccccagaatccatgt
gttattgctaccaagactccttcatcagatgttctggtttttgactacaccaagcatcct
tccaagccagaaccttcaggagaatgccatccagatctaaggttgcgtggtcatcaaaaa
gaaggctatggtttgtcatggaaccccaatctaaatggatatcttctttctgcaagtgat
gaccacactatatgcttgtgggacataaatgccactcccaaagagggacgagtaatcgaa
gctaagtcggtgtttactgggcacactgctgtagtagaagatgtggcctggcaccttttg
catgagtccctatttgggtctgttgctgacgaccagaaacttatgatttgggataccaga
tgtaacaacacatcgaaaccctctcacacagtggatgcacatacagcagaagtaaattgt
ctcagctttaacccatactccgagttcatattggcaactggaagtgctgacaaaactgtc
gcgctttgggatctccgaaacttgaagttaaagcttcactcattcgagtcccacaaggat
gagatattccaagtgcaatggtctccgcacaacgaaaccatactcgctagcagcggtact
gacagaagactgcatgtgtgggatctgtccaaaatcggtgaagaacaaacagcggaggat
gcagaagacggtccacctgagttgctcttcattcacggaggtcacaccgctaagatctcc
gacttctcctggaaccctaacgagccatgggtcatctgttcggtttctgaggataacatt
atgcaggtttggcaaatggctgaaaacatttacaatgatgaagaaccggagacacccgcc
tctgaactggaatctagcgtcaacgtaaaccacggatag
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integrated database retrieval system
