Pieris rapae (cabbage white): 110995479
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Entry
110995479 CDS
T05162
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03030
DNA replication
prap03420
Nucleotide excision repair
prap03430
Mismatch repair
prap03440
Homologous recombination
prap03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110995479
03420 Nucleotide excision repair
110995479
03430 Mismatch repair
110995479
03440 Homologous recombination
110995479
03460 Fanconi anemia pathway
110995479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prap03000
]
110995479
03032 DNA replication proteins [BR:
prap03032
]
110995479
03400 DNA repair and recombination proteins [BR:
prap03400
]
110995479
Transcription factors [BR:
prap03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110995479
DNA replication proteins [BR:
prap03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110995479
DNA repair and recombination proteins [BR:
prap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110995479
MMR (mismatch excision repair)
110995479
DSBR (double strand breaks repair)
HR (homologous recombination)
110995479
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
PAS_8
DUF8448
IBR
GDH2_N
Motif
Other DBs
NCBI-GeneID:
110995479
NCBI-ProteinID:
XP_045483984
LinkDB
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Position
4:complement(3519512..3527409)
Genome browser
AA seq
607 aa
AA seq
DB search
MAYNLSEGSLEVIMKGGHYDKPIMQVLGSKKIQGNGSVERFRLLVSDGKHSHSFAILATQ
LNDKLISGELSDYSVVQIDRFVTSILNNEKSEKNGDRRVMIIVAITIIASGSQVGKKLGN
PITWSEDASKTSPQALQPVARPTPAPSRPMSSMANSNASTNLDSSMLSSQMTHPITSLSP
YQNKWVIKARVMTKSPIRTWSNAKGEGKLFSLDLCDESGEIRATAFRNECDRFYDMLQVD
KVYYISRCQLKTANKQYTTIKNDYEMTFTADTVVAECMEDTSSMPSVKFEFIPISDIANK
NVDTLLDTIGVCKMASDVQELTARNTGKLLKKREVTLVDPSGGAIALTLWGNEAETFDSS
TNPIVAAKGVRLTEFNGSKSLSCLASTVLRMNPDLPEAHKLRGWYDNGGADMDVINISAR
AGGYTGGSSEWMTFSEAESKQLGSGSKGDYYSLLGVLTFTFSDNALYKACPQEQCNKKLV
DQENGLFRCEKCNREYPNYKYRLLLSANVSDPTGDQRITAFNEAAEAMLGQKASEIGSLL
EHDKAAYAHLFEDVKFKTFLFKFRTKMEVYSDEARLKTTVMNASPVDYKDANSRLIKGIK
ALSGVEI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcatacaatttgtcagaaggatcacttgaggtgataatgaaaggcgggcattatgat
aaaccaatcatgcaagtgttaggtagtaaaaagatccaaggtaatggatcagttgaaaga
ttcagactcctagtgtcagatggcaagcattctcacagttttgccatacttgcaactcag
ctcaatgataaactaatttctggggagttgtctgattattctgttgttcaaattgataga
tttgttacttctattttaaataatgaaaagagtgaaaaaaatggtgatagacgtgtcatg
ataattgtggccatcacaataatagcatctggaagtcaagttggcaaaaaacttggaaat
ccaataacatggtctgaagatgcttcaaaaacaagcccacaggccctacaaccagttgcc
agacccacaccagccccaagtagaccaatgagctctatggcaaattctaatgcctctaca
aatctagatagcagcatgctgagttcacaaatgacacatcctattacaagtttaagtcct
tatcaaaataaatgggtaatcaaagcccgtgttatgactaaaagtcctattcgcacatgg
agcaatgccaagggtgagggaaaactgttcagtttggacctgtgtgatgaaagtggagaa
atacgggccacagcattccgtaatgagtgtgacagattctatgatatgctacaagtagac
aaagtgtactacataagtcggtgtcaacttaaaacagccaacaagcagtacacaactatc
aaaaatgactatgagatgacattcacagccgacacagtagttgcggaatgtatggaagat
acctcaagcatgccctctgttaaattcgagttcataccaatcagcgacattgctaacaag
aatgttgacacactattggatacaatcggagtatgcaagatggcgtctgatgtgcaagaa
ctaactgcccggaatactggcaagttgctgaagaagagagaggtcactcttgtagacccg
tctggaggggctatagcattgacactctggggtaacgaagcggagacatttgacagcagc
acaaaccccatagtagcagcaaagggagttcgtctgactgaattcaacggaagcaaatct
ctctcatgtctagcaagtactgtgttgcgtatgaatcctgatttaccagaagctcataag
ttaagaggctggtacgacaatggaggtgctgatatggatgttatcaacatatctgccaga
gccggtggctacacaggcggtagtagtgaatggatgacattctccgaagcggaatcgaag
caactcggttccgggagcaaaggggactattattcgcttctaggagttctaacattcact
ttctccgacaatgcactatacaaggcctgcccacaggaacagtgtaataagaaattggtg
gatcaagaaaatgggcttttccgatgtgagaagtgcaaccgggagtatcctaattacaag
tatcgcctgctcttgtcggcaaacgtgtctgatccgactggtgatcagcgcataacagca
ttcaatgaggcagccgaggccatgttgggtcaaaaggcgtcggaaatcggcagtcttctt
gaacacgacaaggctgcgtatgcgcatctctttgaagatgtcaagtttaagacgttccta
tttaagttccgtaccaagatggaagtttacagtgatgaagcccgtctaaagacaacagtg
atgaacgcttcgcccgtcgattacaaagacgcaaactccagacttattaaaggcatcaaa
gctttgagtggcgtcgaaatataa
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