Pieris rapae (cabbage white): 110995879 Help Entry 110995879         CDS       T05162                                  Name (RefSeq) afadin isoform X1   KO K05702   afadin Organism prap  Pieris rapae (cabbage white) Pathway prap04517   IgSF CAM signaling Brite KEGG Orthology (KO) [BR:prap00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     110995879 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RA DIL PDZ FHA PDZ_6 PDZ_2 RA_3 RA_2 Yop-YscD_cpl Motif Other DBs NCBI-GeneID:  110995879 NCBI-ProteinID:  XP_022118958 LinkDB All DBs Position 12:complement(83811..117401) Genome browser AA seq 1735 aa AA seqDB search MVLDAVTRKMDAADKRMLDREALRNMIQQWNANRLDLFELSEPNENLEFHGVMRFYFQDS GQKIATKCIRVASDATVIDVIGTLIEKFRPDMRMLSLGSYTLWETHAPGDERQLEPHEKP LLVQLNWHADDREGRFLLKCCSQPDMPLSSINEKGDQNFKRKLSKREKKELKKKEKLSRL KSDTNDENRPVAEKLYSELPETSFTRSISNPEAVMRRRRQQKLERKLQQFRSEDGGPDTG GTLKIYGSSLCPDVPYKTLLLSVGDSAAAVLREMLDKYGLSRHEPAQYCLVQVDTTDDSE YILEDDECPLAIVMTHPHRSSIMFHVRRRPSEGQPRRRKKKPSGGAGARPGTDPMLIEVT PDGTALENGRRLRVADVVEVGSVNGTALQLYGPSIQPRHCVLAPTEGGHSVTPLHADAQV YVNGRRVTHTTRLQHGCLLKFGRVSTFRFVDPAQEQLISRNISQSQHYGSGSIYDRSTAD SGAMSPSSLASPHRDLLDDDDHPDDGHYDEDDNDNNNTLKPEESPRSNDSKHEFGRDERE HSSRTSHRLSYKDNYETTFDLDGNVETKSICSAKSGGSGHENRSGGGAWRAGQEAILPAV LEFPEAGQAQFLSAVISRLDPHAPAFKLAPVYTLYLCARYRASTHYRPELTPTERAHKLT AFLHHVATLIHATVQERRADSAAQAFWMANASELLHFLKCDRHVCSFSTQAQESLPITVQ NAFSNLVSCFAEELRGAVWALARGGGDDTEATAPVLQALAAAMVLLRRCRVNAALTIQLF SHLFHFINAIAFNKLVSEPNNITPRWGASLSARLALLAAWAERQGLELAADCHLARTHRA ARLIQGEYRTAEEVRAALAACFKLNSVQVRALLSPLLPADLVEAAVAHARALADELYRAD GREIELEESEWLGTALLIPGDGFSAEVVRGVPPGLAEFVAPLQRGGLCRLAPQPHAVGLW TVYMHAHAAPPRRPPDPTPQLIQLHKNSNGMGLSIVAAKGAGQSKLGIYVKSVVAGGAAA ADGRLAAGDQLLSVDGHSLVGISQENAAEYLVRTGPIVTLEVAKQGAVLHGLATLLHQPA YAQQRPGGGGVAGGRRASERDLPSRLAAEPVKPSKSTPALHQPPGPPPPQSPLSPPNLLS PGVRATASKSRSSHNLSSPPVDSFYQNLASVHDRRDSRWSSLRSSGGGRPQSAHFDEHHA DLDRHQVNQANARAAKLAEMSEEVTRRQQLQYQHMQQHLQQQQQHSQQQQQHSQQQQQHS QQQQQHSQQQMFYKPATPQMYAPAAYDASSHPTSQPGPQPVSHDVPSPGPQSLQGSMHGL HNIQGSQAFISHNQQPTPQPHASYGQPQRYEWVQAGPPSPQRSQPPVAPKPPGPRRPELD PVELGQLSHGTPARVRADEVKHDTEQHAASAQEAASAYATHNPWQREERERQAEARRAAA RARRDHTVAHLLALGATRTAAQNQQLRALQLERDFERRATQHQTDEGGNGEGSPEEESPP SEHPAERDSRLHGQHPQPPAPKSILKSNTRAETLNGFQTHPSPSEESRMSELSVNVSGMS VSAASGDPVPLVAPTPPERGSSFAVMATRRPPSPQSPAGTGRDKRVSFHERASEPPPAPP ASSPPPMDVPAAPREDPDRFLEEAESMLDEVGAGAAHASPSAAHTPGVIGAQEVYRDPRT RRLAEQRARAAPAPVPEHLSFKEKMKMFALESGEASTPKDKVKISRAQRDIDAVH NT seq 5208 nt NT seq  +upstreamnt  +downstreamnt atggttcttgatgcggtgacaagaaagatggacgcggcggacaagcggatgctggatcgc gaggcgctccgcaacatgatccagcaatggaacgccaaccgcctcgacctcttcgaactc agcgagcccaacgagaacttggagttccatggcgtaatgcgattctactttcaagattcg ggccagaagatcgccacaaagtgcatccgcgtcgcgtccgacgctacggtcatcgatgtc attgggacgctgatagagaagttccgtccggacatgcgcatgctgtctctgggctcctac acgctgtgggagacgcacgcgccgggcgacgagcggcagctggagccccacgagaagcct ctgctggtgcagctcaactggcacgccgacgaccgtgagggtcgcttcctgctcaagtgc tgctcccagcccgacatgccactgtcctctataaatgagaagggagaccaaaacttcaag cggaaactgtcgaaacgggagaagaaggagttaaagaaaaaagagaaactgtcaaggttg aagtcggacacgaacgacgaaaatcgtccggtcgccgagaagttatattcagaactgccc gagacgtcgttcactcgcagcatcagcaaccccgaggcggtgatgaggcgtcggaggcag cagaagctcgagaggaagctgcagcagttccgctccgaggatggtggacccgacaccggt ggcacgctgaagatctacgggtcgtccctgtgcccggacgtgccgtacaagacgctgctg ctgtccgtcggtgactccgcggccgccgtgctccgggagatgctggacaagtacgggctg tctcggcacgagcccgcgcagtactgcctcgtgcaggtggacacgactgacgattcggag tacatcctggaggacgacgagtgtcctctggccatcgtcatgacgcatcctcatcgcagc tccataatgttccacgtccggcgtcggccgtcggagggccagccgcgacggcgcaagaaa aagccgagcggcggcgcgggcgcacgtcccgggacagaccccatgctcattgaggtcacg ccggacggcaccgccctcgagaacgggcgccggctgcgagtcgccgatgtcgtcgaggtg ggatcggtgaacggcacggcgctgcagctgtacggaccttccattcagccgcggcactgc gtgctggctcccaccgagggcggacactccgtcactccgctgcacgccgacgcacaagtc tacgtcaacggacgacgcgtcacgcacactactaggctacagcacggctgcctactcaaa ttcggccgagtgtccaccttccgtttcgtggatccggcgcaggagcagctcatcagccga aacatttctcagtcgcaacattacggctcgggctccatctacgacaggtcgaccgcggac agcggagccatgtctccctcgtcgctggcctcgccccaccgggacctcctcgacgacgac gaccaccccgacgacgggcactacgacgaagacgacaacgacaataacaacacgctcaaa ccggaagagtcgccgcgctcgaacgattccaagcacgagttcggccgcgacgagcgcgag cactcgagtcgcacctcgcaccgcctcagctacaaggacaactacgagaccactttcgac ctggacggcaacgtcgagaccaagagcatctgtagcgccaagagcgggggctccggacac gaaaatagaagcggcggcggcgcgtggcgagcgggacaggaggcgatcctcccggccgtc ctggagtttccggaggcggggcaagcccagttcctgtccgccgtcatctcgaggctcgac ccccacgccccggccttcaagctggccccggtctacacgctctacctgtgcgccagatac cgcgcgtccacccactaccggccggagctgacgccgacggaacgagcgcacaagctcacc gcgttcctgcaccacgtcgccacactcatacacgccaccgtgcaggagcgtcgcgcggac tccgcggcgcaggcattctggatggccaacgccagtgagctgctgcacttcctcaagtgc gaccggcacgtctgctctttctccacgcaggcgcaggagtcgctccccatcacagtgcag aacgcattcagcaacctggtgtcgtgcttcgcggaggaacttcgcggcgcggtgtgggcg ctggcccgcggcggcggagacgacaccgaggccacggcgcccgtgctgcaggcgctggcc gccgccatggtgctgctgcggcgctgccgagtaaacgccgcgctcaccatacagctgttc tcgcacctattccacttcatcaacgccatcgccttcaacaagctggtctcggagccgaac aatatcacgcctcgatggggcgcctccctgtccgctcgcctggcgcttctcgcggcctgg gccgagagacaagggctggagctggcggccgactgccacttggcgaggactcatcgagcg gcgcgtctgatccagggcgagtaccggacggcggaggaagtgcgagccgcgctggcggcc tgtttcaagctcaactcggttcaagttcgagctttgctctcgccgctccttcccgccgac ctcgtggaggctgccgtggcgcacgcccgggcgctcgcggacgagctgtaccgggccgac ggtagagagatcgagctggaggagagcgagtggctgggcacggcgctgctgatccccggc gacggcttcagcgcggaggtggtgcgcggcgtaccccccggcctggccgagttcgtggcg ccgctgcagaggggcggactgtgtcgtctggcgccgcaaccgcacgccgtcgggctctgg accgtctacatgcacgcgcacgccgcgccgccccggcgcccgcccgaccctacgccgcag ctcatccagctgcacaagaactccaacggcatggggctcagcatcgtcgccgccaagggc gcaggacaaagcaagctgggcatctacgtcaagtctgtggtggcgggaggggccgcggcg gccgacggacgcctggcggccggagaccagctgctgtcggtggacggtcactcgctcgtc ggcatctcgcaggaaaacgcggccgagtacttagtgaggacgggcccgatagtgaccctg gaggtggccaagcagggagccgtgctgcacggcctcgcgactcttctgcaccagccggcc tacgcgcaacaacgtccgggtggtggcggtgttgcggggggtcggcgcgcgtcggagcgc gacctgccctcgcgtctggcggccgagcccgtcaaacccagcaagagcacgccggcgctg catcagccgccgggcccgccgccgccgcagagtccactgagcccgccgaatctgctgagt cccggcgtccgggcgacggccagcaagtcccgtagcagccacaacctctcctcgcctccc gtcgactccttctaccaaaacctcgcctccgtccacgacagacgagacagtagatggtct tccctccggtcgtccggcggaggccggccccagtcggctcattttgatgaacatcacgcg gacctcgaccgacatcaggtaaaccaggcgaacgcgcgagcggcgaagttggctgaaatg tccgaagaggtgacgagacgacagcagcttcaatatcagcatatgcagcaacacttgcaa caacagcagcagcattcacaacaacagcagcagcattcacaacaacagcagcagcattca caacaacagcagcagcattcgcaacaacagatgttctacaagccggcgacgccgcaaatg tacgcgcccgcagcgtacgacgcctcttcgcatccgactagccagcccggccctcaaccc gtatcgcacgacgttccgagccccggcccgcagagtctgcagggctcgatgcacggcttg cacaacattcagggctcacaagccttcatttcccataaccagcagcctaccccgcagcct cacgcctcgtacgggcagccacagcggtacgagtgggtccaggcggggccgccgtcgccc caacggtcgcagcctccggtggctcccaaaccgccgggcccccggaggccggagctcgac cccgtcgagctcggtcagctttcgcacggcactcccgcccgcgtccgtgccgacgaagtt aaacacgacacagagcagcacgcggcgagcgcccaggaggcggcctcggcttacgcgacg cacaacccgtggcagcgggaggagcgcgagcggcaggccgaggccaggcgggcggccgcc cgagcccgccgggaccacaccgtcgcacatctgctggcgctgggcgcgacgcgcaccgcg gcgcagaaccagcagctgcgagctctgcagctcgagagggacttcgagcgccgcgcgacg cagcaccagacggatgaaggcggaaacggcgaaggcagccccgaagaggagtctccgccc tcggagcatccggccgagcgggactcgaggcttcacggccagcacccgcagcctcccgcg cccaagtccattctgaagagtaacacgagagcggagacgctcaatggcttccagacgcac ccgagcccgagcgaagagagccgaatgagcgagctgtccgtgaacgtgtccggcatgtcg gtgtccgcggcgtccggcgatcccgtcccgctcgtcgccccgacgccccccgagcgcggc tcgtccttcgccgtgatggccaccagacgcccgccgtcgccgcagtccccagcgggcacc ggtcgggacaagcgcgtgtccttccacgagcgagcctcggagccgcctcctgctccgccg gcctcgtcacctccccccatggacgtccccgccgcccccagagaggaccctgaccggttc ctggaggaggccgagagcatgctggacgaggtcggagccggagcggcgcacgcttcgccg tcggccgcgcacacgccgggcgtcatcggtgcacaggaggtgtacagagaccctaggacg cgtcgcctggcggagcagcgagcgagggcggcgccggcgccggtcccggagcatctgtcc ttcaaggagaaaatgaagatgttcgccctcgagtccggcgaggcctccacgcccaaggac aaggtgaagatctctcgggctcagcgagacatcgacgcggtgcactag

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