Pieris rapae (cabbage white): 110996041
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Entry
110996041 CDS
T05162
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110996041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prap03041
]
110996041
Spliceosome [BR:
prap03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110996041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
WD_LRWD1
WD40_RFWD3
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
110996041
NCBI-ProteinID:
XP_045489652
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All DBs
Position
24:3984335..4003337
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AA seq
531 aa
AA seq
DB search
MSDDDDVILVKKPKTLYYGSLEEQEKARLAALAAAVKEGVEDGDAKELGDIQISNEYMEL
EEEMSRDKKALLEEFERRRKARQLNVSTDDDEVRRSLRQLGESVCLFGEGPAERRVRLRD
LLSYLGEDAINKKLEEEEARIERDRGREGTWYHEGPPELRESRLWIARYSLPRAKERLMK
AREELKLSGSIRAAAKQESQRRASAMTIYCSQIGDARPISFCRFSNDSQMLITSSWSGLI
KVWSVPDCKLLQTLTGHTCNVSSAVFHPDAAIPHHFTRLIDKDSDQQNSMDIGEEVSKSV
TMASSSYDGNVHLWNFASEKPMASLEGHSPSRVARVEFHPSGRFLAATVFDHSWRLWDLE
TATEVLHQEGHAKPVYSVAFQGDGSLAATGGMDAFGRVWDLRTGRCVMFLEGHLGAVLGT
TWSPAGHHLATAAADHQAKIWDLRRRACLYTIPSHTHLISDIRYQRSHGHFLLTSSYDKT
AKLWSNPAWHPLKTLSGHDNKVMSADISLDNKYIATSSYDRTFKLWAPDLV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgatgatgttattctggtaaaaaaaccgaagaccctttattatggatct
ctggaagagcaagaaaaggcccggttggctgcactggcagcagccgtcaaagaaggtgtt
gaagatggtgatgctaaagagttgggagatatacagatatcaaatgaatatatggagctt
gaagaagaaatgtcaagggataagaaagctctgcttgaagagtttgagagaagacgtaag
gctagacagttaaatgtatcaacagatgatgatgaggttcgaagaagtttgaggcagctg
ggtgaatctgtttgcttatttggagaaggcccagcagaaagacgtgtaagattgagggat
ttactaagctatcttggtgaagatgccataaacaagaagttagaagaagaagaagctaga
atagaaagagatagaggaagagaaggcacttggtaccatgagggaccaccggagttgaga
gaatctagactctggattgcaagatattcattgccaagagcaaaagaaagactaatgaaa
gcaagggaagagttgaaattaagtggaagtataagagcagcggcgaaacaggagtctcag
aggcgggcatctgctatgacgatttattgcagtcagattggtgacgctcgtccgataagt
ttctgccgcttcagcaatgatagtcaaatgttaataacttcaagttggtctggtttgatc
aaagtatggtctgttcccgattgcaaattactacaaaccctcacagggcatacgtgtaat
gtcagttcggcggtctttcaccccgatgcagctatccctcatcattttacgcgcctgata
gataaagattcggatcagcagaactcgatggatataggcgaggaggtgtcgaaaagcgtc
acgatggcatcgtcgtcctatgatggaaatgtgcacttatggaattttgccagtgaaaag
ccaatggcatctttggaaggtcattctccatcacgcgttgccagagtggagttccatcca
tccgggagattccttgctgcaactgtcttcgatcactcgtggagattatgggatttggag
actgcaactgaggtgttgcaccaagaaggtcatgcgaagccagtatatagtgtggccttt
cagggagacggttcgctggctgctacagggggcatggacgcgttcggacgcgtctgggac
ctacgaactggccgctgtgtgatgttcctcgaaggtcacctgggtgcggtgttaggaacc
acctggtctccggccggacatcacttggctacagcggccgctgatcatcaggctaaaatc
tgggatcttagacgccgtgcctgtctttacacgataccttcacatacacatcttataagt
gatataagatatcaacgcagccatggacatttcctgctgacgtcatcgtatgataaaacg
gctaagttgtggtcgaatccagcttggcatcctctgaagacactgtcgggtcacgataat
aaggtgatgagtgcggacatatcattggataataaatatattgcaacgagctcctacgac
cgaacgttcaagctgtgggccccggatttagtttaa
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