Pieris rapae (cabbage white): 110996304
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Entry
110996304 CDS
T05162
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110996304
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prap02000
]
110996304
Transporters [BR:
prap02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110996304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
SMC_N
AAA_15
AAA_29
AAA_23
AAA_30
AAA_25
Motif
Other DBs
NCBI-GeneID:
110996304
NCBI-ProteinID:
XP_045485119
LinkDB
All DBs
Position
1:2412989..2448359
Genome browser
AA seq
1649 aa
AA seq
DB search
MRFYLRVLMWKHLISRMKKYIQTPLELLSTLVLFVILYIFKDDLNPVNKHKSVEGFTIHE
TDVIPLNQLEAPIMIYYFPETDLTKLLMEKVAAKLRVKEQEQLYGAFRGYSPISSYTEIE
KFFNTVSVYDAVIIFPDSLRNSSNTWPESLKYTIRMKNNFMTRHHKSLDDNLGSHRNFAT
TYNSFLRLQWAIDSTYLQLLTGNDINLRVSLQELPYAEVAANQIVAIIGQILVFLSWFSL
DLVFTFLCSRLVEERSSGVQELIKMVGVSSNMLNLSHFLNVLPTGIIFSVVNSALLTASS
NPIVPHSNPLLIAIMFLLYFIAIVAVAFALSYMVKNPQYIVSVCSVVYIVFSCASKWLLD
LAIPWFVMPFAMLIPHAPMLTFWKEMVALEQYGEGIKLSNMATTHAKNSVSVLGCYFYFV
LQWVIFFSLTRYLSLVMPGPYGQPLPWTFFCQKSYWSKKQIGPEEEIEEMEEMGEEDALF
FEQPPRNAEVGIKIVNVSKVFDKKRVLNNVTMDVIKGEITVLLGHNGAGKTTLMSIITGM
LSPTEGKVYVEGLDTCTQREEMQQHLGLCPQHNLFFPDLTVLEHVIFFTLLKGESYKEAK
SSSIKLLDHLGLSTKLNEPSSALSGGMKRRLQLACALAGDAKLLVLDEPTAGLDVESRRQ
LWDLLSSLRGSRTVLLSTHFMEEADALGDRVAALQAGKLRCHATPMYLKRALGTGYRLTF
TTIGLPREQALTEVIQSHIPDATLKETSINSISYSLPAKDSTKFPKLFTALENKRAQLGI
DSIGVGKSTLEEVFLKLCSDITTSFDDDEIDGDIQEADYPKVTGTKLYLRQFSALFRRQL
KYVWSKKIGFLIAQIVLPLFFIYGITHLTNDYKTNEEKNPPATMNLGMYHDLPNSRVLYK
VDKSYSLRSLSDAYPKIDFEVADDVATSQNILCHDCEDENILRISKRNQLDYNKYIVGLE
LNQTDAKILFTTRVRHAAPVAMNVLTNLLASQLLPWSDGVTLSTINYPLETAQQRSAEIV
EPKEMSNIFLWSAFIVFIVICTIMNAASIACKERETSTRHIFIMSGCPPLVFWLSTLIAH
ITIYTLLLVIPTLVACVALDRDETINKPDFLGTLFLIMLLSTMSVLCFVYFVSFFFAETA
ATTILVVILFFFGIITPAVKSGTEFFQEDVPVYANFLLAFVAYTIPPHTVAMAMKRAGNI
ARVNAYCDLNKDKCPNLLVPDLNFDVKKCCELNEKSLNYFSFDDASPLYYMLILVGQTIV
YMALVIACEKGLFMCWIDRIFNSRYSPETSTNVDQMVCAEKCYVNKAIDLPPRDIRDAML
VDDVHKKYLNYPKPCTAVKGVSFSVQKGECFGLLGVNGAGKSTTFKMLTSSECPTRGRIF
GNGYHMDKSRTEYLRSLGYCPQFFGLDVFLTGRENLTLLLTLQGRDEEHIHDEVASWIDT
VGLEKYADQPVSAYSGGCARRLSTAASLCGNAAVTLLDEPTAGVDVAARRRVWAALRRAT
AARRALIITSHSMDEMEALCNRIAIMSAGEIRALGEPAVLRANHAAGHALTLKLMPTATD
ETDGSKPDLRKLKAALQDRFNCTLKDEHKTMLQYHINDEIPYSELFSALEKLKQQNPLVE
DYSVTETTLEEVFLSFAQDEQTPEQESPA
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgcggttttacttacgggtgcttatgtggaagcacttaatcagccgcatgaaaaaatat
atccagactccgctagaactattgtcaacactggttcttttcgtcatactgtatatattt
aaagatgatttaaacccagtgaataaacataaaagcgttgagggttttacgattcacgag
acggatgtaattcccctgaatcagttagaggcacctataatgatttactattttcctgaa
actgatcttacaaagcttttgatggaaaaagtagcagccaaattgcgcgtgaaggaacag
gaacaattatatggtgcatttcgtggatacagcccaatatcaagctataccgaaattgaa
aagtttttcaatactgtatctgtatatgatgctgttattatttttcctgatagtttacgg
aactcatcaaacacttggccggaaagtcttaaatatacaatacgcatgaaaaataacttc
atgacacgccaccataagtctttggatgataacctaggatcacatagaaactttgccaca
acttacaactccttccttcgtttgcaatgggccattgatagtacttatctccagctgtta
acgggaaatgatattaacctgagagtctccctccaagagttaccatatgccgaagttgca
gcgaatcaaattgtggcgattatcggacaaatccttgtgttcctaagttggttttcattg
gatctggtttttacatttctatgttcgaggttggtagaagaacgatcgtcgggagttcaa
gagctgataaagatggtaggagtgtcatcgaacatgttaaacctgtctcacttcttgaac
gtgcttcctacgggaatcatattcagtgtggtgaattccgctcttttaacggcatcctcg
aacccgatagtgcctcactcgaatccactcttgatagccatcatgtttctgctctacttc
atcgccattgttgcagtggcctttgcgttaagctatatggtgaagaatcctcaatacatc
gtatctgtttgctctgtggtgtacatagttttctcatgtgcatccaagtggctcctggat
ttagctatcccgtggtttgtgatgccctttgcaatgctgattcctcacgcccccatgttg
acattctggaaggaaatggttgctctggaacagtatggagaaggaataaaattatcgaat
atggcgactacgcacgcgaagaacagcgtatcagtactcggctgttacttttacttcgtt
ttgcaatgggttatttttttctcgctcacacgctatctctctctcgttatgcccggacca
tatggccaacccttgccttggactttcttttgtcagaaaagctactggagcaaaaagcaa
atcggtccagaagaagaaatagaggagatggaggagatgggagaagaagatgctttgttc
tttgagcagcctccgaggaatgcagaagttggcataaagattgtaaatgtttctaaggtg
ttcgataagaaacgcgtgttaaataatgtcacaatggacgtaataaagggagaaatcaca
gtgttgctaggtcataatggcgcagggaaaacaacacttatgtctatcataactggcatg
ttaagcccaaccgaaggcaaggtgtacgtagaaggactggatacgtgcacgcaaagagaa
gaaatgcaacaacacctcggcctttgtccgcaacacaatctcttcttcccggatcttact
gtgcttgaacatgtcattttctttaccctgctcaaaggcgaaagctacaaagaggcgaaa
tcctcatcaataaagttgttggaccacttgggcttatccaccaaactgaatgaaccgagc
agtgccctatctggtggaatgaagagacggctccaactggcgtgtgcgttagccggagat
gccaagttgctggtgttagatgaacctactgctggattagatgtggaatctagaagacag
ttgtgggatttgctgtcgtccctccgcggttctcgaacggttttgctgagtacgcacttc
atggaagaagcggacgcgttgggcgaccgcgtggctgcattgcaagccgggaaactacgt
tgtcacgctacgcctatgtatctcaagagggcattaggtaccggttaccgcctaacattc
acaactatcggactacctcgagaacaagccctaactgaagtgatacaatctcacatcccc
gacgccacactcaaagaaacctctatcaactcaatctcatacagtctcccagctaaagac
agtacgaagtttccaaaattatttacggctttggagaataagagggcacaactcggcatt
gattctattggcgtgggaaagtcgacgttggaggaagtttttttaaaattgtgcagtgat
attactacaagttttgatgatgacgaaatcgatggtgacattcaagaagccgattaccca
aaagtaactggaacaaaattgtatttacgccagttctctgctctgttccgccgtcaattg
aagtatgtttggagcaagaagataggctttcttatagcgcaaattgttctacccttattt
tttatatacggtataacgcatcttaccaacgattataaaaccaacgaagaaaagaaccca
ccagcgactatgaacctcggcatgtatcatgatttgccgaattcgcgggttctttataaa
gtggacaagtcttatagtttgcgaagcctaagtgacgcctatccgaaaatcgactttgaa
gtagcagatgatgtggctaccagtcaaaatatcctatgccacgactgtgaagatgaaaat
attttgcgtattagcaagcgaaatcagttggattacaacaagtatatcgttggattggaa
cttaatcaaaccgacgcaaagattttgtttacgactcgtgtacgtcacgcggcacccgtc
gccatgaacgttctaaccaatttgctcgcgagtcaactattgccttggagtgatggtgta
accttgtccactattaattatccactggaaacggcgcaacaaaggagtgcggagattgtc
gaaccgaaagaaatgagtaacatcttcttatggagtgccttcatcgtcttcattgtcata
tgtacaattatgaatgcggcgagcatcgcatgtaaggagcgggaaactagtactcgacac
atatttatcatgtctgggtgtccccctctggtgttttggctctcgacgttgatagcgcac
ataactatatacactctgttactggtgatacccactttggtggcctgtgtcgccctggat
cgcgatgaaaccattaacaaaccggactttcttggtaccctgttcctgataatgctgctg
agtacgatgtcggtcctgtgttttgtctatttcgtgagctttttcttcgcagagaccgca
gccaccaccattcttgtcgtgattctgtttttttttggaattatcacaccagctgtaaag
tctggaactgaattctttcaagaggatgtaccggtctatgccaacttcctcctcgcattt
gttgcctatacgataccgccacatacggttgcaatggcaatgaagcgggccggcaacatc
gcacgtgtgaacgcatactgtgatctcaataaggacaaatgtccaaatctgttagttccg
gatttaaacttcgatgtcaaaaaatgttgcgaattgaacgaaaagtcgctgaattatttc
tcgtttgatgacgcgtcgccgctttactacatgctgattttagttggccaaaccattgtt
tatatggcgttagtgatagcctgtgaaaaggggctctttatgtgctggattgatcgaata
ttcaactcgagatattctccagaaaccagtaccaatgtcgatcaaatggtttgcgctgaa
aagtgctatgtgaacaaggcgattgatttaccaccccgagacatccgcgacgcgatgttg
gtagatgatgtacacaagaaatatttgaattaccccaagccatgcactgctgtcaaaggg
gtcagcttctcagtccaaaaaggtgaatgctttggtctcttgggggtgaacggtgcggga
aaatcaacaacattcaaaatgcttacgtcaagcgaatgtcctaccaggggacggatattt
gggaatggatatcacatggacaaatcgaggactgagtacttacgttcgttggggtactgt
ccgcaattcttcggcttggacgtatttttgacgggccgcgaaaacctcacgctgttgctg
acgctacaaggccgcgatgaagaacatattcatgatgaagttgcctcctggattgatacc
gtagggctagagaaatacgcagaccaaccagtcagcgcgtactccggtgggtgcgcgcgc
cgtctatccaccgcggcttctttatgtggcaatgcagccgtgactctgttggacgagccc
actgccggagttgacgttgccgcgcgaagacgtgtctgggcagcgttgagacgggcaaca
gcggcgcgacgggcgcttattattacgtcgcatagtatggacgagatggaagccctctgc
aaccgtatagccataatgtccgcgggcgaaatccgcgcgttgggagaaccggccgtactc
agggccaaccacgccgcgggacacgcccttacactgaaactgatgcccaccgctactgac
gaaacggatggttcgaaaccagatttaaggaagctaaaggcagctctacaagatcgattt
aactgtactctcaaggatgaacataagactatgctccaataccacataaatgatgagata
ccatacagcgagctgttttcagctttagaaaaactaaagcagcaaaacccactggttgag
gactattcagtgacagaaacaactctagaagaagtattcctttcatttgcacaagatgag
cagactcctgagcaggaatcgcccgcttaa
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