Pieris rapae (cabbage white): 110996541
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Entry
110996541 CDS
T05162
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03013
Nucleocytoplasmic transport
prap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110996541
09122 Translation
03013 Nucleocytoplasmic transport
110996541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
110996541
03041 Spliceosome [BR:
prap03041
]
110996541
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110996541
Spliceosome [BR:
prap03041
]
Complex C
Other components
EJC/TREX
110996541
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110996541
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
110996541
NCBI-ProteinID:
XP_045489001
LinkDB
All DBs
Position
22:complement(5264713..5286913)
Genome browser
AA seq
1405 aa
AA seq
DB search
MSTLTKFISEYCKTWEKSGRDSYIKLITQYIKDEGKSPLFTKSGKLSGLSQSIYDLLLSE
LKGYLKKDAVISVLREITMIHADMPSILLDVVCVLDAETSLDVQTEERSNFCYLVRELES
FLSDKLLKERLEIDTLQDVGTLKNKNFYTKFIKIKTKLYYKQRKFNLFREESEGYAKLIV
ELNQEISEGTEWKSILEIIQSLIGCFNLDPNRVLDIILESFEARPHLDKLFISLIKHYMC
DPRVISEVLGFKLGNMDVLDNYKEPPHLMTVIALLLQHQVISLDDIYPWLRPDDIIMAKE
ADKELKSVQDFLRKLNIVSTKGPQANGATEFIEEKADPQEYWSNQKLVLSEALLRVCAWS
EFSALFSRIQVSAMPPRPAKALCDMLHAVVEPLYRTKCRVAPKIMGAPIPPLKSKLGPKA
CKTFEDMKETVIPALILLGPALHHDPILMYKVIRILRTSRSAGGDPLEHESLTVLDAAIL
PALTLMEGNCCMAEEVYTLLKLYSYQCRYCLYARWKNESGEKIPSLMRVRGNSLQRIKHI
MKRVSKENIKPQGRLIGKLSHAAPAFLFDYMLLQIQTYDNLIGPVVESLKYLTSLSLDVL
GYCLVEALSAGRGIGASGAAHPPWLQALAAFAGAAFKKHNIELTGLLQFVANRLKAQQSQ
DLLILKEIVQKMAGIEAAEEMTPEQLDAMAGGELLKGEAGYFSQVRNTRRSSARLKDAVV
GNNLDIALCILSAQQRHCCVWKEGEEISGESSGSQLKVVGRLADQCQDALVQLGTFLASS
HAPDEYAARLPALPELLRDYHVDADVAFFLHRPVIAQIIAAKVESLRKASDSKLDSLEKS
ITRYSIASKEALEPIVTSITPLLPDKVWEDISPEFYVTFWSLSMYDLRVPVESYEREIDR
LKLAASAATKDSQGTKGKKEQERFNSLIEKLQDERRRQEDHVSRVHARLSRECSGWFPAR
AVKSAKNETVTRLMQLCLFPRCVFTATDALYCAQFVHTVHSLKTPNFSTLLCYDRLFCDI
TYSVMSCTEAEAGRYGQFLCRVLGTAMRWHADRASFHAECAHYPGFVTKYRVSNQFREAN
DHVGYENYRHVCHKWHYKITKAMVVCLDSGDYVQIRNALIVLIKILPHFPVLAKLAQIIE
RKIDKVKEEEKIQRPDLYVLATGYSGQLRHKAPNLMNESDFHQVVEQKPTQPVSVKEDTH
KSDTAASPVQTPESEKKESKSSDRRREEPDREKESKRESRSSNKERNKDELRSKDKSPRE
RSHREDRYLEAISPPHEHRHPSDDVDRDVKRRKVESSGNGKGSKEFEERSPEKEKRKSKL
RGDDRKERKMSRKRQDRIDESPIMEQKRRRDEQKAILKMASHQNGSQEDHHYEKYHKREK
SPFRDRSIEEPRDKHRRSNESKIRR
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgagtactctgacaaaattcatatcagagtactgcaagacatgggaaaaatcaggcaga
gattcatatattaagctaatcacacaatatatcaaagatgaaggaaaaagtcccctattt
acaaagtcaggcaaattatctggcctttcacaaagtatctatgatttgttgctctctgag
cttaaaggataccttaagaaagatgctgtgatatctgtattgcgtgaaataactatgatt
catgcagatatgccatcaatattactagatgttgtttgtgttttggatgcagaaacttca
cttgatgtgcaaacagaggagagatcaaacttctgctatttagtccgagagttagaatct
ttcttatctgacaagttattaaaagaaagactagaaatagacactttgcaggatgttgga
acactaaaaaacaaaaacttttatactaaattcattaaaataaaaactaaactatattat
aagcagcgtaaatttaatctttttagagaagaaagtgaagggtatgccaaattaattgtt
gaattaaatcaagaaatttcagaaggcacagaatggaaatctattttagaaataatacaa
tcacttattggttgttttaatctagacccaaacagagttttagacatcatactggagtca
tttgaagcacgtccacatttagataaattgtttatttcgcttattaaacactacatgtgt
gatccacgagttatatcagaggttctcggattcaaacttggaaatatggatgtattggat
aactataaagaaccgccgcacttaatgactgttatagctttattattacaacatcaagtt
atttctttagatgacatatatccttggctacgtcctgatgacataataatggctaaagaa
gctgataaggaattgaaatctgtccaagattttctacgtaagcttaatatagtttccact
aaaggacctcaagcgaatggtgcaacggaatttatagaggaaaaagcagatccacaagaa
tactggtccaatcaaaagctagttcttagtgaagcgttgctaagagtatgcgcttggagt
gagttctcagcactgttcagtcgaatacaagtatcagccatgccacctcgacctgccaaa
gcattgtgcgatatgctacatgctgttgttgaaccattgtatagaacaaaatgccgtgtg
gctccgaaaataatgggtgctcctattccgccattaaaatcaaaattaggcccaaaagca
tgtaaaacattcgaggatatgaaggagacggtgataccagcgctaatcttacttggacca
gctcttcatcacgaccccattttgatgtataaggtaatacgtatattacgaacgtcccgt
tcggcaggaggcgatcccctggaacacgaatcgttgacagtattggatgcggcaatattg
ccagctcttacactcatggaaggcaactgttgtatggccgaggaggtttatacgttactc
aagttatattcataccaatgcagatactgcctatatgccagatggaagaatgaatctggt
gagaaaattccatcccttatgcgtgtcagagggaattcattacaacgcataaagcacatc
atgaaaagagtctccaaagaaaatataaagcctcaaggaagacttattggaaaattgtcg
cacgcggcgcccgctttcctcttcgattacatgcttttacagatacaaacttatgataac
ctaataggcccagtggtggaatccctcaaatacttgacgtcactgtcactagatgtcctg
ggttattgtcttgtcgaggcactgagtgcggggagaggtattggcgcaagtggtgcggca
cacccgccatggttgcaggcgttagccgcgtttgcaggcgcggcctttaagaaacataat
attgaattgacaggattattgcagttcgtcgctaatcgcttgaaggctcaacagagtcaa
gatttgctaatacttaaggagatagttcaaaaaatggctggaattgaggccgctgaggag
atgacacccgaacaattagatgccatggcgggcggcgaattacttaagggggaggcggga
tacttctcacaagtgcgaaacaccagacgatcgtcagcgaggctaaaagacgcagtcgtt
ggcaacaatttagatatagcactttgcattttgtccgcccaacaaagacattgttgtgtt
tggaaagaaggggaagaaataagcggggaatcgagtgggtctcagttaaaagtagttggt
cgtttggcggaccaatgccaggacgcgctcgttcaacttggcacgttccttgcgtcttcg
cacgcgcccgacgagtacgctgcgagattaccggctttaccggaactacttcgggactac
cacgtagacgcagatgtggcattctttctccatcgtcctgttatagctcaaataatcgct
gcgaaggtggagtctcttcgcaaagcctctgatagtaaattggattctctcgagaagagc
ataacgcggtacagcattgcctccaaggaagccctggaaccaattgtaacatcgattaca
ccactcctacccgataaagtatgggaagatatttcgcccgaattctacgtcacgttttgg
tcgctatctatgtacgatttacgcgtgccggtagagagctacgaaagggaaatagataga
ttaaagctggctgcctcggctgccaccaaggattcccaagggaccaaggggaagaaggaa
caggaacgctttaatagccttatagaaaaattacaggatgagcgtcgtcgtcaagaagac
cacgtgtcacgcgtgcacgcgcgtttgtcccgcgagtgtagcggctggttcccagccaga
gctgtcaaatctgccaaaaacgaaactgtcacgcggctgatgcaattgtgtctgtttccg
cgttgcgtgtttacggcgacggatgcattgtactgcgcccaatttgtgcatacagtgcat
tctctgaagacgccaaacttttctacgttgctgtgctatgatcggctattctgcgacatt
acgtactcagtgatgtcctgtactgaggcggaagctggcaggtacggtcagttcctttgc
cgggttttgggcacagctatgcgttggcacgcggaccgagcttccttccacgcggagtgt
gcccattacccaggctttgtgaccaagtatcgtgtttccaaccagttcagagaggcaaat
gaccacgtcggatatgagaattatagacacgtatgccacaaatggcactacaaaataacg
aaggcgatggtggtttgcctggattcgggtgactatgtccaaatacggaacgcgttgatt
gtcctcatcaagatattgccacactttccagttctcgctaaactggctcagattattgaa
aggaaaattgataaggttaaagaagaggagaaaattcaaaggccggacttgtacgtgttg
gccacgggttacagtggccaattgaggcacaaagcaccgaatctgatgaatgaaagcgat
tttcatcaagtggtagaacagaaaccaactcagcccgtcagcgtcaaagaggatactcat
aagagtgacacggccgcctcaccagttcaaactccagaaagtgagaaaaaggaatccaaa
agcagtgacagaagacgagaagaaccggatcgcgagaaggagtcaaaacgtgaatcgaga
tcgtcaaacaaagagagaaataaagatgaactacgaagtaaagacaaatcgccgagagaa
agatcccatagagaagaccgctatttggaggcaatatctccgcctcatgaacacaggcat
ccgtctgatgacgttgatcgtgatgtgaaacgacgtaaagttgaaagcagcggcaatggc
aagggtagtaaagagtttgaagaacgttcgccagaaaaagagaaaagaaagtctaaactt
agaggcgatgatcggaaagagcgtaagatgagcagaaaacggcaggatcgaattgatgag
tcacctataatggaacaaaagcgacgaagagacgaacaaaaagctattttgaaaatggcc
agtcatcaaaatggttctcaagaggatcaccactatgaaaagtatcataaaagggaaaag
tcaccattccgggatcgctcaatagaagagccaagagacaaacatagacgctcgaatgag
tcaaaaatcagaagatag
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integrated database retrieval system
