Pieris rapae (cabbage white): 110996605
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Entry
110996605 CDS
T05162
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110996605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
110996605
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110996605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
CSTF1_dimer
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_NOL10_N
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
PAC11
Beta-prop_EIPR1
ASA1
CFAP251_N
DSE1_N
NBCH_WD40
eIF2A
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Ge1_WD40
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
RMC1_N
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_NWD2_C
Beta-prop_Nup120_160
Beta-prop_DCAF12
UCP007778
WDR54
Motif
Other DBs
NCBI-GeneID:
110996605
NCBI-ProteinID:
XP_022120054
LinkDB
All DBs
Position
24:615999..623607
Genome browser
AA seq
432 aa
AA seq
DB search
MKEDSGEIDTRNVVKNRELMYRMIISQLYYDGFQPIAATLASAVHADPPCPPSDRLLNLM
MVGLQHEPDRKDRLAAANVAEHLMGTTGFDLEFEMDASSLAPEPATYETAYVTSHKMACR
AGAFSSCGQLVATGSVDASIKILDVERMLAKSAPEEVEAGREQQGHPVIRTLYDHTDEIT
ALDFHPREQILVSASRDCCIKLFDITKASAKKAYKSITDAEPVLSVAFHPLGDHIIAATT
HPVIRLYDVTTSQCFVCPINSHHHKKQVNSIQFSPNGKYYASGSADGSVKLWDTVSNRCF
NTFRNAHEGEVCSVAFTRNSKYLLTSGMDSTIKLWELASSRCLIQYTGAGTTGKQEHPAQ
AIFNHTEDYVLFPDEATTSLCTWHSRSASRCQLMSLGHNGAVRHIVHSATAPAFLTCSDD
YRARFWYRRNTH
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagattccggtgaaattgatacgagaaatgttgttaagaaccgagagttgatg
tatcgtatgattataagtcaactgtactatgatggattccagcctattgcagccacattg
gcaagtgccgtgcatgcagacccaccctgccccccaagtgacaggcttcttaaccttatg
atggttggacttcaacacgaacctgacagaaaagacagattagcagctgcaaatgtagcc
gaacatttaatggggacaactggctttgatttggaattcgaaatggacgcgtcctcattg
gctcccgagccggcgacgtacgagacggcgtacgtgacgtcacacaagatggcgtgtcgt
gcgggcgcgtttagctcctgcggacagctggtcgctacgggcagtgtggatgctagtatt
aagattttagatgttgagcgaatgttggcgaagtctgctccggaggaagtggaagctgga
agggagcaacagggacatccggtgatacgtactttatatgaccacacagacgaaataaca
gcgctggactttcacccgcgggaacagatcctggtgtcggcgtctagagattgctgcatc
aagctttttgatatcacaaaagcttcagcgaaaaaagcttacaagtccataacggacgcc
gaacccgtattgagcgtagcctttcatccattaggtgatcatatcatagctgcaaccact
caccccgtgatacgactgtatgacgtcaccaccagccagtgcttcgtttgtccaatcaac
agtcatcatcacaagaaacaagttaattctattcagttttcgccaaacggcaaatactat
gccagcggaagcgctgatggaagcgtgaagctttgggatacagtgtcgaataggtgtttt
aacaccttccgtaacgcacacgagggagaggtgtgttcggtggcgtttacgcgtaatagc
aagtacctactgacatctggaatggattcaacaattaaattatgggaactggctagcagc
cgatgcctcatacagtacaccggggctggtaccactggtaagcaagagcacccggcccag
gcgatatttaaccacaccgaagattatgtcctgttccccgatgaggccacaacttcactc
tgcacttggcattcccggagtgcgagtagatgtcagctcatgtcattggggcataatggt
gctgttagacatatcgtacactctgctacggcgccagcgtttttgacttgtagcgacgat
tacagggctcgattttggtatagacgcaatacgcactaa
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