Pieris rapae (cabbage white): 110996624
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Entry
110996624 CDS
T05162
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
prap03037
]
110996624
Cilium and associated proteins [BR:
prap03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
110996624
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Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_WDHD1_1st
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR19_1st
TPR_GEMI5
FIMAH
Motif
Other DBs
NCBI-GeneID:
110996624
NCBI-ProteinID:
XP_022120078
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Position
15:8413676..8423123
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AA seq
1362 aa
AA seq
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MTLYIDVKLRFKDENVVSTVSLWHPSLPLLAVGSFNQEKGGCVTIFQENGQILEGCDWPV
LSSNQATALAWHPTRRLLVVGWDGGELYIWLEYAWARLEAPHNAALTSVTFSPGGGRLLA
SDASGSLSGWQSSSGAPLTAFHHQLGDVITHVKFCAPLPSSESSIRGLARAAVAGDENAL
DVLAAWRPRTTARMRENYQPDNFACYAAQDNGIILYIDHSGSCSEVLNAPGVIVFLDIIS
TIYLLVAWESAGAISLSRFLIANDGSLTTDSHVRMSSKNGQGIVLVGNFLVAVITGDKVI
RVWDSETGENEVLPNEGEETTEGETFTSISFCSLSDTLCCGTSQGNLYLWRRDHKNKWKL
LSSTSVKGTVKEICWGSEGLMNPLLHVNCITSAFILSEQHICWGYSAKLCMVQKSANEIN
VIERNNTTSCINSTLTIKTFAFKDNYVALGDSNDIQIWMCSKDDETKFAHIRTFSWKTSA
IFMYNEVLVGIANPHIECYSVHGNKLGILPSIEGEGEPIAVTNTNKFIVVATIDGVLKLA
EITKKGLRMPYPPKNCFQIFEDFGEVMRASVNLNGNYICLSIANSGLAPDPRIYLWDVAN
DKITSTLLSDNQAPPYQSVPIAILWDTLDPRLVAVHLRSVDFDRVHLFFCHEGILHEYKN
WCPTFDNYFTSDFLLCSLHSPHVVILSRQNMQKILFNEFDQSKEDDSTAIKDTMNFLFYM
SIGLLEKAVIIGTNIAGARKAVVWTSLAKECVLRKRADVGAVCLSKMGNLKGALMMRKVM
SDDSTDETSKVGVLAVNLGMIDEAQRLFRENKRLDLVTRLISAKDGGLNDILNEDTEGEN
VLLIKSAQHKLAKISWMNGDVAASFKLFEKSGTLVPHVPRMLIAQGQAPMLAQYVSTSKD
AKLIIWWGHYLESIGDLDGALQGYSQANDFGEQTRLLCHMDRLDEAEKLCQKNSSSLYQM
ARHLEVHSKETENIVKMYIKSGAIVSAIRVAAESNAWHLVWRAGSSSPKHALYAASILEN
AGQMEQAISLYQKAGKGHMALKLAMTSGDTNAIVTAVESLGDRVDPALAETLATHLRNAE
HHSQAAALLATAGKFEEALDLVENSTAPISEELSERLAAPVGTSGRDVLLRRLADMLGAR
GLYHQAAKRLANIGDKAGAMRWLIRSGDAERIATFAAASRDRTAQLMAADYLRRRAPWKT
RPDLTRHILHFYTRAKAYGKLAAFYAECAKMEVDEYENYEKGLEALKEASRCIAKSTDPE
MNAQSIAIQEQSTLVKRFIDVKKTLQGGDINTGVTSGQQLMRSVSGRPGLVTQEKILKML
LMYAPTHPELEKLEQQLKSLQIQPQDDNSASDSPEQSIEEAI
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgactctctatattgatgtaaaactaagatttaaagatgaaaacgtggtatctacagtc
agtttatggcatccttctttgccattgttagctgttggttcattcaatcaagagaaaggg
ggttgtgtaacaatatttcaagaaaatggtcaaatattagaaggatgtgactggcctgta
ttgtcatctaaccaagccacagctttagcatggcatccaaccagaagacttcttgttgta
ggctgggatggtggagagctctatatttggttagaatatgcttgggctcgtttggaagca
ccacataatgctgctttaacctcggtaacttttagtcctggtggagggaggcttctggcc
tcagatgcatctggatcattatctggttggcaatctagttctggtgcacctttaacagca
tttcatcatcaactaggagatgtaataactcatgtaaagttttgtgctccacttccatca
tcagaatcttctataagagggctagcacgagcagctgttgcaggtgatgagaatgcactg
gatgttttagctgcttggagaccgcgcacaacagccagaatgagagaaaattatcaacca
gataattttgcttgctatgctgcccaagacaatggtattatattatatattgatcattca
ggatcctgctctgaagtattaaacgcacctggtgtaattgttttcctggatattataagc
actatttatcttttggttgcatgggaatctgcaggagcaataagtttatctagatttctt
attgccaatgatggttcattgactactgacagccatgtaagaatgtcatcaaaaaatggt
caaggtattgttttagtaggaaactttttagtagcagtcattactggtgataaagtcata
agagtatgggatagtgaaactggagagaatgaagtgttgcccaatgaaggtgaggaaaca
acagaaggagaaacatttacaagcataagtttctgcagtttaagtgatacactttgttgt
ggaacatctcaaggaaacttatatctatggagacgtgatcacaaaaataagtggaaatta
ttaagcagcacttctgtaaagggtactgtgaaggaaatctgttggggctccgaaggcctt
atgaatcctcttttacatgttaactgtataacaagtgctttcatattatcggaacaacat
atatgctggggatattcagcgaagctttgtatggttcagaagtcagcaaatgaaattaat
gtcatagaaagaaataatacaacttcatgtataaattccacattaacaataaaaacattt
gcttttaaagataattatgttgcattgggagatagcaatgatatacagatttggatgtgt
tctaaagacgacgaaacaaaatttgcacatatacgcacattctcctggaaaaccagtgct
atttttatgtataatgaagttttggttgggattgctaatcctcacattgaatgttactct
gttcatggaaataaattaggaatacttccaagcattgaaggagaaggcgagccgattgca
gtaacaaatacaaataaatttatagttgtggcaacaattgatggtgtgctcaaactcgcc
gaaattacaaaaaaaggactaagaatgccctatccaccaaagaattgttttcaaatattt
gaagatttcggggaagtgatgcgagcttcagtaaacttgaatggaaattatatatgtttg
agcatcgctaattccggtttagcaccggaccccagaatatatctatgggatgtagcaaat
gataaaattacaagtacattgctttctgataatcaagcgcctccgtatcaaagtgtgcct
attgctattttatgggatactttagatcctagattagtagcagtccatttgcgctctgtt
gatttcgatcgcgttcatttgtttttttgccacgaaggcatccttcatgagtacaaaaat
tggtgtccaacttttgataattactttacgtccgattttcttctatgttcgttgcattcg
ccacatgttgttattctttctcgacaaaatatgcaaaagatattatttaatgaatttgat
cagtctaaagaagatgatagcactgcaattaaggataccatgaattttttgttttatatg
agcattggattattggaaaaggctgttattattggtacaaacatagcaggagcgagaaag
gctgtagtatggaccagtttggctaaagaatgtgtgcttcgtaaaagagccgatgttggt
gcagtttgcctgagcaaaatgggcaatctaaaaggtgctttaatgatgcgaaaggttatg
agtgatgatagcacggatgagacatctaaagtgggagtgcttgccgtcaaccttggtatg
atagatgaagcacaacgtctgtttcgcgaaaataaaagacttgatcttgttacacgtcta
atatccgcaaaagatggtggcttaaatgatattctaaatgaagacactgaaggcgaaaac
gtacttcttataaaaagtgcacaacataaattagcgaaaattagctggatgaatggagat
gtggctgcatcttttaaattatttgagaagtcaggcactctggtcccacatgtaccaaga
atgcttattgcccaaggtcaagcgccgatgttagcccaatatgtatcaacctcaaaagac
gctaaactgattatctggtggggtcattatttagagagcataggcgatctagacggtgca
ttacaaggctattctcaagccaatgattttggtgaacaaacgcgtttattgtgtcatatg
gatagacttgatgaagctgaaaaactatgtcagaaaaattcttcctcgttgtatcaaatg
gcacggcatctagaggtgcattctaaggagactgaaaacattgtcaagatgtatataaag
agtggagctatcgtatcagctattcgcgttgcagctgaatcaaatgcatggcatttagtt
tggcgagcaggttcttcatctccaaagcatgcgctctatgcagcatcaatacttgagaat
gcagggcagatggagcaggcgatatctttgtaccaaaaggcaggtaagggtcacatggcg
ttgaaactggcgatgacttccggagacacgaacgcaatagttacggccgttgagtcgctg
ggagatcgcgtagaccccgccctagctgagacgctcgcgactcaccttaggaacgctgag
catcattcacaggcagctgctttactggcaactgctggaaagtttgaagaggcattagac
ctggttgagaattctactgctcccatatcggaggagttgagcgagcgtctcgctgcaccg
gtaggaacttccgggcgtgacgtgttgttacgtcggttagcggatatgcttggggcaagg
ggcctgtaccatcaggcggctaagcgattggctaatattggtgacaaggctggggcaatg
cgttggctgatccgttctggggacgcagaacgaattgcaacatttgccgctgccagtcga
gatcgaaccgcccagttaatggcggcggattatttacgaaggcgggcgccttggaagacc
cgaccggatttaacaaggcacatccttcacttttatacgagggcgaaggcctatggaaag
ctagcggctttttatgcagagtgcgctaagatggaagttgatgagtatgagaactacgag
aaagggctggaggcgcttaaagaagcttcacgctgtatagctaaatctacagatccagaa
atgaatgctcaatctatagcaattcaagaacaaagtactttagttaaacggtttattgat
gtgaagaagacattacaaggtggagatataaatacaggagtaaccagtgggcaacagcta
atgcgcagtgtgagtggtagacccggtcttgttacacaagagaaaatattaaaaatgctt
ttgatgtatgctccgacgcatccagagttagaaaagttagaacagcaattgaagtcacta
caaattcaaccccaggatgataattctgcttcggattctccagaacagagcattgaagaa
gctatatag
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