Pieris rapae (cabbage white): 110996690
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Entry
110996690 CDS
T05162
Name
(RefSeq) transcription factor sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prap03000
]
110996690
Transcription factors [BR:
prap03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110996690
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110996690
NCBI-ProteinID:
XP_022120194
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Position
12:9776913..9778243
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AA seq
245 aa
AA seq
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MSTLSHHPYAFSMHPGMLPEYPSAPQPLPASSPQSEGHIKRPMNAFMVWSRLQRRQIAKD
NPKMHNSEISKRLGAEWKLLSEMQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKPATPG
SAPGAGAFPSFPLPYFAGPAPNVGQFDALSYPAVSPYFPHQLDHLQFSKLMAPTAEKLPT
ASSAAAVVSSFYSSLYTTPTGPPKPFSSPLFHQYGVAPSSPVSPVTPTQHSPHDDQLRRP
VSVIY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacacttagtcatcacccgtacgcgttttccatgcatcccggtatgctcccggaa
tacccgagcgctccacagcccttgccggcttcttcacctcagtcagaaggacacatcaaa
agacccatgaacgctttcatggtgtggtccaggctacaacgacgtcaaattgccaaggac
aacccgaagatgcacaattcagagatatcaaagcggctcggtgctgagtggaagttgttg
tctgaaatgcagaagagaccgttcattgacgaagcgaagaggctccgtgccttgcacatg
aaggagcacccggactacaaatataggccgcgcaggaagcccaagcctgcgacacccggc
agcgcacccggggctggcgcttttccaagcttcccgctgccctatttcgccggcccggcc
ccaaatgttggacaatttgacgcattatcatacccagcagtgtcaccttacttccctcat
caactggaccatctgcagttttcaaaactaatggctccaacggcagaaaagttgccgacg
gcatcatcagcggcggcggtcgtttcgtccttctattcgtctctgtatacgactccgacg
ggaccacctaagccgttttcatcacctctgttccaccagtacggagttgccccatcatcc
cccgtgtctccagtgactccgacacagcacagcccgcatgatgaccagctaaggcggccg
gtctccgtgatctattga
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