Pieris rapae (cabbage white): 110996924
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Entry
110996924 CDS
T05162
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03008
Ribosome biogenesis in eukaryotes
prap03013
Nucleocytoplasmic transport
prap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110996924
03015 mRNA surveillance pathway
110996924
03008 Ribosome biogenesis in eukaryotes
110996924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
110996924
03009 Ribosome biogenesis [BR:
prap03009
]
110996924
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110996924
mRNA cycle factors
Stress granule specific factors
110996924
Ribosome biogenesis [BR:
prap03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
110996924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
TAP_C
LRR_8
LRR_4
UBA_8
LRR_1
LRR_9
UBA_4
LRR_6
Motif
Other DBs
NCBI-GeneID:
110996924
NCBI-ProteinID:
XP_045488413
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Position
19:complement(7562194..7581553)
Genome browser
AA seq
807 aa
AA seq
DB search
MSNQNNTPQEVHNKFNIRLLQRVDTKIREKVSESQRNIHVLTAHKPGPSKPAGKKKPPDV
FPYSNRPKGVPVTFLLNKDFQGAITPQQGPMDEPNQTVSEQINTYGQPNQMQPNQIYGYS
MGQQMYGQQQQMLGQAQIFGQQQMHFQPMYGQSILGPVPQMIPQPAERYPPVPMIETDNF
TKASREQYSPTGIYDDNDSKSDYGSRDSDSSDVFKNQKKRQSAFERLGPQTKQTKPKLTI
NLCLDKEQPIREVVTKQVPVYERDEIMTSTDPTVMKFRYLWPWKNTIKLKRSVTARSSKT
VMILEREQVEEEYKNDNLFMIVSVVGFPPSWTKENVLDAILEDLKEKSFIPCFIEFNSRN
CKFLVNRCRSALLALHWQGFSIRKDDVELMITISVTCLNTKVLEYIPRLVIRNRLIFGYD
GKKVDLSEFTLKSDISNFIYFPLNRPTNQAEIIELIQSCDWEHLEHLDLSHNRLTSIQDF
DLVSKLPKLLHLDLSYNLLDNVQSVLPLRGLMLQSLSLEGNPLCLNYVDGDYYIKVFKTL
FPCLRELDGVPIQRGHRMPELKQCYCLSDAKPLVEKFVSYFFRLLDLEPEKRGSIQEMYH
KDAVLTVTTNKKLRYNHEYSLTRQLFHRSRCLVEGNYDFVQSSEKIGKLIYNWPHLRHDI
HSFNIDVMMHTESQTLLRINGIVSTRSESLADEEKVLAFTRTVLLVCEDGVEYKIYNEML
YWDEATKECAANAFTVAIVQNETPSWKFESPLDDESKSNLINVFSKLTGLNSRQSSRCLE
EKDWDLKIALEYFMKLLKLDNIECLAN
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaaaataatactccacaggaagtacataataagtttaatatacgattgctg
caaagagttgatacaaaaattagagaaaaagtatctgaaagtcaaagaaatattcatgtt
ttgacagcacataaaccaggaccaagcaaaccagccggcaaaaaaaaaccaccagatgta
tttccatattctaatcgccctaaaggtgtacctgttacatttttgttgaataaagatttt
caaggagctataacccctcaacaagggccaatggatgaaccaaatcaaacagtgtctgag
caaattaatacatatggtcaaccaaaccaaatgcaacctaatcaaatatatggttattca
atggggcaacaaatgtatggacaacaacaacaaatgcttggacaagcacaaatctttggt
cagcagcaaatgcattttcaaccgatgtatggtcaatcaatacttggtccagtaccccaa
atgatacctcagccagcagaaaggtatccaccagtaccgatgatagaaacagacaatttt
acaaaagcatcaagggaacagtattctccaacaggaatttatgatgataatgacagtaaa
tcagattatggttctagagattcagactcttcagatgtcttcaaaaaccagaaaaagcgc
caaagtgcctttgaaagattggggccacagactaaacaaactaaacccaagttgaccatt
aatttgtgccttgataaagaacaacctatcagagaagtagtaacaaagcaagttcccgtg
tatgaacgagatgagataatgaccagtacggacccaactgtaatgaagttcagatattta
tggccttggaagaatactataaaacttaagcggagtgtcactgctcgatcatcgaagact
gtgatgattctggagcgggaacaggtggaggaagaatacaaaaatgataacttgtttatg
atcgtatctgtggtgggattcccgccgtcatggacaaaagaaaatgtcttggacgcgatc
ttagaagatctcaaagaaaaaagttttattccctgctttattgagttcaactcaagaaat
tgcaaattcctagtaaacagatgtcgttcggcgctactggcactgcattggcaaggtttt
tcaattcgtaaagacgatgtcgaattgatgataacaatatcggtgacgtgtttgaatacg
aaagtgttagaatacatcccccgtttggtgattaggaacaggctgattttcggttatgac
ggcaaaaaggttgatttgagcgagttcacgttgaagagtgatataagcaacttcatatat
ttcccattaaatcgtccaacgaaccaagccgaaataatagaacttatacaaagttgtgat
tgggagcatctggagcacctggacttatcgcacaatcgtcttacatccatacaagatttt
gatctcgtgtctaaattgcctaaattactacacttagacctctcatataacttactggat
aatgttcaatcagtgttgccattgcgaggtttaatgttgcaatcgttatcgttagaaggg
aatccgttatgtttgaattatgtggacggcgattattatataaaagtttttaagacattg
ttcccgtgtttaagagaattggacggcgttcccattcaaagaggacatcgaatgccggaa
ttgaaacaatgctattgcttgagtgacgctaaaccattagttgagaagtttgtgagctac
ttctttaggcttttggaccttgagccggagaaacgaggttctatacaggaaatgtatcat
aaagatgcagtcttgactgttaccaccaacaagaaattacgttacaatcacgaatacagc
ctcacacgtcagctattccaccgcagccgttgcttagtggaaggaaattacgatttcgtc
caaagttcggaaaaaatcggtaaattgatatacaactggccacacttacgacacgatata
cattcgtttaacatcgacgttatgatgcatacggaatcacaaactctcctccgaattaat
ggtattgttagtacaagatccgagtcgttggctgatgaagagaaggtcttagcgttcaca
agaactgtcttacttgtatgcgaggacggcgttgagtacaaaatctataatgagatgctg
tattgggatgaagctacaaaggagtgtgccgcaaacgccttcacagttgccattgttcaa
aatgaaacaccaagttggaagtttgagagtcccttggatgacgagagcaagagtaatcta
ataaacgttttctctaaattaactggtttgaattcgcgtcaaagttcaaggtgcttggaa
gaaaaagactgggatttaaaaatagctctagaatactttatgaaattacttaagttagat
aatattgaatgtcttgcaaattaa
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