Pieris rapae (cabbage white): 110997112
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Entry
110997112 CDS
T05162
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110997112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prap03000
]
110997112
03021 Transcription machinery [BR:
prap03021
]
110997112
03036 Chromosome and associated proteins [BR:
prap03036
]
110997112
Transcription factors [BR:
prap03000
]
Eukaryotic type
Helix-turn-helix
ARID
110997112
Transcription machinery [BR:
prap03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110997112
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
110997112
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
Zap1_zf2
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
110997112
NCBI-ProteinID:
XP_045484507
LinkDB
All DBs
Position
6:complement(1331342..1356419)
Genome browser
AA seq
1588 aa
AA seq
DB search
MPLIEINTKMGKTQINTKSRDYLNDKETFLKELKQFNESKNIPYRVPVVNGVEIDLYLLY
SSVQQKGGLSRVNQTDTWESFLRLLKLPYPCVNGSTLLRRIYGMYLEKYERAKGPPGRDD
DNDMDEDPRRSRSGMPRISFGSGTYISASGEQLKTTAPKFAGPSERLTLSLLSPMPNEQD
FAINVCTVLAADHSNRLPLNTTPHILDFLLAHAGVYNHSSLRDTIGRSYYEARGRYPHDF
WEMRAGGGGAKELADETKFMQPGIEQPELMVQALAAHNTLTDCLMNGGDNDDILDKVVED
LHQQDMEDWVTEPSEEDQLFAPELPGGASCVYTQRVLQIASIVRSLSFHEDNVQYLSRNT
TLIRFLLLCANCWVGTLRQSGLDTLGNISTELLIKDPATCLISRHVLSTIQTALSSPDRA
RILAALELLNKLAQNEANEDALLRSLEAKVYSDVCSLLTLRDIMVLVCTLECVYALTSLG
EAASEAVARVTGLVHTLVSLVTVEAQSYGPRACILMRVVETVSGPAAVAERESEKPQQQQ
PQVQVKPQEPVTTSSPHAHIIVSNSAPPNVTPTTALSSIQVSHLHQRTVQENEHFAQAWL
RSTYEPLPANDNSTCDAAEMYRNYMTCCTKVGRKGIIAPAHFPRLVRTVFGGTVGPNTVA
TSSGEMQQLYVGIRAKNSTVKATTPAGPSSPILKAQLTNKTDVKPVVTQAQTQPASHPHL
SQALESTANTSTSLIKHLLAHKVSPGMQTQVAQRQNQRAPPTGAVVIQTNTNTGMEVDPE
TLIKCTTITPGGVASNTPLQDKVNVTEDIGAPKEAPVQIQIDEQAQLTIKTAQNKMLADL
LEKKSNPPVQVVQMNQHAPTIQITETGQIVQLKPEASPVIVNPDQPAPYLQIKNEQGQLI
QIKNDSGQVIQLKSDQGVIQFKNDQGQLVQIKNESVIQSVKTEVDPIVTDHSYTEPPSKR
PKVEDKTENNSPQESVSKTAANLYAALAASALEDEEDLRPRGILVSGPMAQKLPQKPENP
DAIQPVLVGGAVESPVIIQEPILQVQQPTLQVQQPSMQVQQSSMQVQQTPHQMPQPMLQV
QPMDVQNIISSQSGQIILQEKTVTSQPQFVQQPMQLIATQNTSQGGIGYLPSNIPGNMMQ
KTIIIVQGASGGPLTLTVNNPSGLDEATLNSLIAQATEAITQQQIIQNKGVIQSTQRVIV
SQSALVSTSQPIAVVKSAIAQNSPQITQSQQPIITTQPQPHKAQIVNQQPQQIVVTQKQP
PALISTTTGNPIGNQQIIQGNQQLLQGNQQIIAVSNNQQIIVNTPMKQNVHRVVQPQRIQ
TTVSNAAPVQIESKSVVQSPAKTQQPVMRQVITRQPVMVGNTKIGDKETVVSQPVTEQKP
PKCDPTPPPQPTTSQNQEDTPWICHWKGCGKTFTNASSVFTHAARTHCPGGAGGEAPCMW
IDCDRVPRKTFALLNHLNDKHCTQQALKAIYNSRRHAAAEPEANKPVSVAYPPNAALAAL
NKHATDLFNPRELMHKNDRAMDQGDENEGPVTKSIRLTAALILRNIVIYSNTGRRMLRQY
EAHLASIALSSVEASRTIAQVLYDMNNI
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgccgttaatagaaataaatacaaaaatgggtaagactcaaataaacaccaaatcaagg
gattatcttaacgacaaagaaacatttctcaaggaattgaagcagtttaatgaaagtaaa
aatattccatacagagtgccagtagtaaatggtgttgaaattgatttatatttactgtat
tcctcagttcaacaaaaaggtggcttaagtagagtcaatcaaacagacacatgggaatca
tttctgcgattactcaaattgccctacccttgtgtaaatgggtcaacacttttaagaagg
atctatggcatgtatcttgaaaaatatgaacgagcaaaaggtccaccaggaagggatgat
gataatgacatggatgaagatccaagacggagtcgtagcggaatgcccagaattagtttt
ggtagtggcacttatatttctgcatctggtgaacaattaaaaactacagctcctaaattt
gcggggccatcagagaggctgaccttgtcattgttatcgccaatgccaaatgaacaagac
tttgccatcaatgtgtgtactgttttggctgcggaccattcaaacaggctgcctttgaat
actactccacacatattagattttttgctggcacatgctggagtttataatcattcaagt
cttcgggatacaattggtcgttcatattatgaagcgcgaggtcgttatcctcacgatttt
tgggaaatgcgtgctggaggcggcggagctaaggaattggctgatgaaactaagtttatg
caaccgggaattgaacagcccgaattgatggtacaagcattagcagcacataacacattg
acagattgtctcatgaatggtggagataatgatgatatactggataaagttgtggaagat
cttcatcaacaggatatggaagattgggtgacggaaccgtcggaggaagatcagctcttt
gcaccagaattacccggtggagccagttgtgtgtacacacagcgggtcttgcaaatagct
tctattgtacgatcactgtccttccacgaggataatgtgcaatatctatcaagaaataca
acacttatacggtttttattactctgtgcaaattgttgggtgggtacactacggcaaagt
ggtttggacactcttggaaatatatcaactgagcttttaattaaggatcctgctacctgt
ctcatttcgaggcacgttttatcaacgatacagactgcattatcgtcgcccgatcgcgct
aggattttagccgcgctggagttacttaacaaattggcccagaatgaggcgaatgaagac
gcgttgctgaggtcccttgaggcaaaggtgtatagtgacgtgtgttcgttgctaacgcta
cgtgacataatggtgctcgtttgcacgctggagtgcgtatacgcactaacttccttgggg
gaagcggcaagcgaagcggtggcaagagtcactggtttagttcatacattggtttctctt
gttactgttgaggcccaaagttacggaccacgcgcgtgtatactaatgcgtgttgtggaa
actgtgagtggaccagccgctgttgctgaaagggagtcggagaaacctcaacagcagcag
ccgcaagtacaagtgaagccccaagagccggtgacgacatcgagccctcacgcccacatc
atcgtgtccaactcagccccgcccaacgtcacgcccaccactgctctctcctcgatacag
gtgtcgcacttgcatcagagaactgtgcaggaaaacgaacattttgcccaagcgtggttg
cgttcgacgtacgagccgttgccagcgaacgacaatagtacgtgcgacgccgcggagatg
tatcgcaactatatgacgtgctgtacgaaggtcggacgcaaggggattattgcgcctgcg
cactttccgagattggtcagaactgtgtttgggggtacggttggccctaatacggtggcg
acatcgagtggcgaaatgcagcagttgtacgttggaatacgagccaagaattctacggtc
aaggccactacacccgctggaccgtcctcaccgattctaaaggcacagttgacaaacaag
acggacgtcaaaccggttgttacacaagcccagacccaaccagcgtcccatccgcatttg
tcgcaagcgttagaatcgaccgccaatacgtcgacatcgcttataaagcatctactcgcc
cataaagtaagccccggcatgcaaacgcaagtcgcgcaaagacaaaaccagagagcgcca
ccaacaggcgccgttgtgattcaaacaaatacgaatacgggaatggaagtggatccggaa
acgttgataaaatgtacaacaataactcccgggggtgttgctagtaacacccctttgcaa
gataaggtcaatgtcacagaagatattggtgctccgaaagaagcaccagtccagatacaa
attgatgaacaagctcagttaactataaagaccgcgcaaaacaaaatgttagccgatctg
ctagaaaagaaatcaaatccacccgttcaagtagtccaaatgaaccagcacgcaccgacc
atacaaataaccgaaactgggcaaatcgttcaactcaaaccggaagcgagcccggtcata
gttaatccggatcaaccggcgccatatttacagattaaaaacgagcaaggacaactgata
cagattaaaaatgattcgggacaggttatacagttgaagagcgatcagggcgtgatacag
tttaagaatgaccaagggcaattggtacagattaaaaatgaaagtgttatacagagtgtt
aaaactgaagttgatcccatcgttacggaccattcgtatacggagccgccatcgaagagg
cctaaagttgaggacaaaactgagaataattcaccgcaagaaagtgtatcaaaaacagca
gcgaatttatacgcggctctcgcagcgtcagcccttgaagatgaagaggatttgcgtccc
cgtgggattcttgtatctggtccaatggcccaaaagttaccacagaaaccagaaaatcca
gatgcaatacaaccggtgctagtcggcggcgcagtggaaagtccggttatcatacaggag
ccgattttacaggtgcagcagccgacactacaagtacaacagccatcaatgcaagttcag
caatcatcaatgcaggttcaacaaacaccgcatcaaatgccacagccaatgttgcaagtg
caacccatggatgttcaaaatatcatctcatctcaatcaggacagattatattacaagag
aaaacggttacttctcagccgcagtttgttcaacagccaatgcaattgattgcgacacaa
aacacatcacaaggaggtatcggctacctaccgtcgaatattccaggaaatatgatgcag
aaaaccatcataatagtacaaggagcgagtggtggcccgctaacattaacggtgaacaac
ccgagcggtttggacgaggccacactaaacagccttattgcgcaggccacagaggctata
acccaacaacagattatacagaacaagggtgtgatacaatcaacacagagagtgattgtg
agccaatcagcattagtcagcacctcacaaccgatcgccgtcgtcaaatcggccattgcg
cagaattccccacaaataacgcaaagtcagcaaccaattataacaactcaaccgcaacca
cataaggcgcagatcgtcaaccaacaaccccaacaaattgttgttacccaaaaacaacca
cctgccctaataagcacaacaactggcaacccaattggcaaccaacagattattcaaggc
aaccaacagctattgcaaggcaaccagcaaattattgcagtgtcaaataatcaacagatt
atagtgaacacgccaatgaagcaaaacgttcacagagttgtgcaaccacagagaattcaa
acgactgtgagtaatgcagccccggtgcagattgaaagtaaatctgttgtgcaaagtcct
gcgaaaactcagcaaccagtaatgcggcaagtgataaccaggcagccagtgatggttgga
aacaccaaaattggggataaggaaacggttgtttcacaaccagtcacagagcaaaagcca
ccaaagtgtgaccctactccaccacctcagcctacaacgtctcagaatcaagaggataca
ccgtggatttgccattggaaaggatgtgggaaaacgtttacaaatgcttcaagcgtgttc
acgcacgcggcgcgtacgcattgtccggggggtgcggggggtgaggcaccctgtatgtgg
atcgattgtgatcgggtgccgcgaaagacatttgccttgttgaaccatctcaatgacaag
cattgtacccagcaggctctcaaagcaatatacaattcgcgacgtcatgccgcggccgag
ccggaagcgaacaagccggtctccgtcgcctatccacccaacgcggcactcgcggctcta
aataagcacgcgaccgatttgtttaatcccagggaacttatgcacaagaacgatcgcgca
atggaccaaggggatgaaaatgagggaccggtgacgaagagcatccgcctaaccgctgcc
cttatattgaggaacatcgtcatttactcaaatacaggaagacgaatgctcagacaatac
gaagcgcatcttgcatctatagctttgagcagtgttgaagcatcgcgaacaattgcccaa
gtcttatacgatatgaacaatatatga
DBGET
integrated database retrieval system
