Pieris rapae (cabbage white): 110997120
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Entry
110997120 CDS
T05162
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110997120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
110997120
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110997120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
HBS1_N
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
110997120
NCBI-ProteinID:
XP_022120801
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All DBs
Position
23:complement(447081..449397)
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AA seq
680 aa
AA seq
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MARHRNIRNRSYSDDYDYEDVYGHSVEDDVCLSPSDAAQFIYDRSRNQHAISQFLESDDI
QEEPEIEVDADNSRPSFERRESMDLRGLKLSEEDETKLMSCLDELRNILGDTVPDTILIQ
AVIKHKFDYNKALDEILNNNKQDNIKVTTEKPKVLIDSAPIIPVLDKAPIISTSTVDKTI
LIASKPEEANTAVVKGFKINNDTTYSRPQTPRDQSPAVSSRGDNLDESKSTPKAKENKID
PTIKYSNERGSDKEHLYIVVIGHVDAGKSTLMGHLLCELGEVSQRTLHKYEQESKKIGKQ
SFMYAWVLDETGEERVRGITMDVGKAQFETKTKKVIILDAPGHADFIPNMITGAGQADVA
LLVVDATRGEFESGFELGGQTREHALLVRSLGVSQLAVAVNKLDTTNWSQERFNVIVKKL
KLFLKQAGYKDSDVTYVPCSGLTGDNLVKPSNESELINWYTGPTLLDVIDKFNVPDRPVS
KPMRMSINDVYKGTGSGFCVAGRIENGIVNKGDKVLVCPSKEMAEVRNIAINELPTNIAF
AGDQVAITLSGVEMQNVSIGYILSDSVCQVPVTSRFEARLVVFNVKVPITKGYPVLLHHQ
SLIESAHIKKLKALLNKSTGEMIKKKPRCLGNNSVAVVDIEVSRPICIERYKDVKELGRV
MLRVAGVTIAAGLVTEIYTD
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccatcgaaatataagaaatagaagttattcagacgattacgattacgaagac
gtttacggccactcggttgaagacgatgtttgtttatctccaagtgatgctgctcagttc
atatatgatcgttccagaaatcaacatgctatatcacaatttctggagtcggatgacatt
caagaagagccagaaattgaagttgatgccgataactctcggccgtctttcgagcgtcgc
gaatccatggatttacgtggactaaaattgagtgaagaggatgaaactaagctaatgtca
tgcttagatgaactacgaaatattttaggagatacggtgccagatacaattcttatacaa
gcagtaattaaacataaatttgattacaataaagccctagatgaaattttaaataataat
aaacaggacaacatcaaagttacgacagaaaagcccaaagtactcatagactctgcccct
attatacctgttcttgataaagctccaataatttcaacttctacagtggataaaacaata
ttgattgcttctaaaccagaagaggctaacactgcagttgtaaaaggttttaaaataaat
aatgataccacatatagcagaccacagacacccagagatcaatcaccagctgtttcatca
agaggtgacaatttagatgaatcaaaatcaactccaaaagcaaaggagaacaaaattgat
ccaactattaaatactccaatgaacgaggatctgataaagagcatttatacattgttgta
attggtcatgttgacgctggaaaatctacactaatggggcacttactttgtgagcttggg
gaggtaagtcagagaaccttgcataaatatgaacaagaaagcaagaaaattggaaagcaa
agctttatgtatgcctgggtgttagacgagactggtgaggagagagttagaggaattaca
atggatgttggtaaagctcagtttgaaacaaaaacaaagaaagtaattatcttagatgct
cccggacatgcagattttattcctaatatgatcactggggccggacaagcagatgttgca
ttgttagttgtcgatgccactcggggtgaatttgagtcaggttttgaactgggaggtcag
actcgtgaacatgcattgcttgtcagatcattaggagtaagccaattggctgtggctgtg
aacaaacttgatactaccaattggtctcaggaaagattcaatgtaattgtcaaaaagttg
aagttgtttttaaaacaagctggttataaagactcggatgtgacatatgtgccatgctca
gggctaactggagacaatctggtgaagccttcaaatgaatcagagttgattaactggtat
actggaccgactttactagatgtaatagacaagtttaatgttccagataggcctgtgtca
aagcccatgcgaatgtctattaatgatgtatataaaggaaccggttctgggttttgcgta
gcaggtcgtattgaaaatggcattgtaaataaaggagataaagttttagtttgtccttca
aaagaaatggctgaagtcagaaatatagctattaatgaactaccaactaacattgctttt
gctggtgaccaagttgcaataaccctatcaggggtagagatgcaaaatgtatcaataggt
tacatactgagtgattctgtctgtcaggtaccggtgacctcacgatttgaagcaaggctt
gttgtatttaatgttaaggtgccgataactaagggatatcctgtattgctacaccaccag
tcactaatagaatcggcacatatcaagaaattgaaggctctattaaataaaagcacagga
gaaatgataaagaaaaagcctagatgtttaggaaacaattcagtagcggtagtggatata
gaagtttctcggcctatttgtatcgagaggtataaggatgttaaagagttggggcgtgtc
atgttacgagtggcaggagtaactatagcagcaggacttgtcacagagatttataccgat
tga
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