Pieris rapae (cabbage white): 110997163
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Entry
110997163 CDS
T05162
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prap03009
]
110997163
Enzymes [BR:
prap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110997163
Ribosome biogenesis [BR:
prap03009
]
Eukaryotic type
90S particles
Helicases
110997163
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
110997163
NCBI-ProteinID:
XP_022120878
LinkDB
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Position
4:complement(190093..193792)
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AA seq
623 aa
AA seq
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MDAYDIFKKLTKGLKFKQRFLGLSNSDQNVKQILKKETDLKKEELSDHDSEPEQSNVEDN
GDFQESGESSKEEENNLDGDLELLEGVTVSKTSKQRKEKKTKLSLEELKKKKNLEEENRF
RNEYGIKAVGRHITSALRDFDDLVTRYNVSLDMVDTIKKCGYEEPTPIQRQALPALLEGR
QIVATAPTGSGKTAAFLVPLLHFLGAPSGGPRALILCPTRELAHQIYREALRLSVSTQLR
CSVIKSVKSSKVKERESTIRKSDLVISTPNRLCYMLNREDVNISLQKVQWLIIDEADKMF
EGSEEEVDTFRQQLGVVLASLDVRRRIALFSATHTPALAKWARKHLRGLIVLTVGHRNAA
ATTVQQELLFCGNESGKLIAFRQLVQKGLKPPVLVFVQSKERAKQLFKELLYDGINVDVI
HADRTQAQCVFTPQRDRVVRSFRVGRIWVLICTELMGRGIDFRGVNLVVNYDFPPSAIAY
IHRVGRAGRAGQKGRAVTFFTQDDVVNLRSIASVMKQSGCEVPEYMLSIKQDSNRRKLLL
KKAPHRDKISTVLEKPNKRKLEKHAVEDIKNVGETNLVKNSKHEKIRRLSKDNKSPKKGL
KKKENMGKTNNIKMKKRKSLKPV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggatgcctatgatatattcaaaaaactaacaaagggattaaaatttaagcagcgtttt
ttgggcttaagtaattctgatcaaaatgtaaaacagattctaaaaaaagaaacagactta
aagaaggaagagttatccgatcacgactctgaacccgaacagtctaatgttgaagataat
ggtgattttcaagagtcaggcgaatcaagtaaagaggaagaaaataacttggatggggat
ttggaactcttagagggtgttacagttagcaaaacatcaaagcaaaggaaagaaaaaaag
actaagcttagtctagaagagttgaaaaaaaaaaagaatttggaagaggaaaaccgattc
cgcaatgaatatggtatcaaagcggttggacgtcatataaccagtgcattaagagacttt
gatgatttagtgactaggtataatgtatcactggatatggtagataccattaagaagtgc
gggtatgaggaacctacacccatacaaaggcaggcattaccagcattgttggagggtcgt
caaatagtggccacagcacctacaggttcgggtaaaactgctgcattcctagttcctctg
ctgcactttttgggggccccttccggtggtcctcgggccctaatcctatgtcccacacgg
gagctggcccatcagatctatagagaagccttgaggctctctgtctctacgcaactacga
tgcagtgttatcaaaagcgtcaaaagtagcaaagtaaaggagagggaatcaaccattagg
aagagtgatcttgtaataagtacaccaaaccgcttatgctacatgttgaatcgagaagat
gtgaatatttctttacaaaaagtgcaatggctgataatagacgaggcagacaagatgttc
gagggttccgaggaagaggtggacacattccggcagcagctgggcgtggtgctggcttcg
ctggacgtccggcgccgtatcgctctgttcagcgccactcacacccccgccctcgccaag
tgggctcgcaagcatctgcgggggctcatcgtcctcactgtcgggcacagaaacgccgcg
gcgactacggtgcagcaagagttgctgttttgcggcaacgagagcgggaaactgatcgcg
ttccgccagctggttcagaaagggttgaagccacccgtcttagtgttcgtgcagagcaag
gagcgggccaaacagctgttcaaggagctgctgtacgatggcatcaatgtggacgtcatc
cacgccgaccgcacgcaggcgcagtgtgtttttactccgcagcgtgacagagtcgtccgt
agctttcgcgtgggtcgcatctgggtgctgatctgtaccgaactgatggggcgagggatc
gatttccgcggagtcaacctcgtcgtaaactacgatttcccgccttcggccatagcttac
atacaccgagtgggtcgagccgggcgagccgggcaaaagggtcgcgccgtcacgttcttc
acccaggacgacgtcgtcaacttgagaagcatcgcatcagtgatgaagcagtcggggtgc
gaggtgcccgagtacatgttgtcgatcaaacaggattccaacagacgcaaactgttgctt
aagaaagctccgcacagagacaaaatatccactgtcttggaaaaacctaacaaacgaaaa
cttgagaaacacgcagtagaagacataaaaaatgtgggtgaaacgaatttagtgaaaaat
agcaagcacgagaaaattaggaggctaagtaaagataacaaaagccctaaaaaagggttg
aaaaagaaggagaacatgggaaaaactaataacataaagatgaaaaagagaaaatctctg
aaacctgtataa
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