Pieris rapae (cabbage white): 110997237
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Entry
110997237 CDS
T05162
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03022
Basal transcription factors
prap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110997237
09124 Replication and repair
03420 Nucleotide excision repair
110997237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prap03021
]
110997237
03400 DNA repair and recombination proteins [BR:
prap03400
]
110997237
Transcription machinery [BR:
prap03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110997237
DNA repair and recombination proteins [BR:
prap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110997237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
110997237
NCBI-ProteinID:
XP_022120985
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All DBs
Position
2:6452186..6456052
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AA seq
291 aa
AA seq
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MADDDVPSDSSTLVIIVDTNPNQRYITEDPKVLTGCLDAVIAFANSHLMQKSRNELAVIG
CHFHKSEYLYPSPGKPLDVRQIDGQYELFTLVEKTIKMRLVNLIKSQPQEEKPGESLLAG
ALAMGLCFISKIRRESSPALKISSRILIVTGSSDTAAQYINYMNVFFTAQKQQVLIDVCS
LDKHLSLLQQGCDITGGLYLKVPSLEGLLQYLLWVFLPEGSERRQLVLPGRGRVDYRAAC
FCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVFKIAGPLQIKPKKKKMKV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgatgacgttccttcggatagtagcacattagtgattatagttgacacaaat
ccaaatcaacggtatataacggaggatcccaaagtactaacaggatgtttggatgcggtg
attgcatttgccaattcacatttaatgcaaaaatcaaggaacgaactagcagtaattggt
tgtcattttcataaaagcgaatatctgtacccatcaccaggcaaacctttggatgtaagg
caaattgatgggcaatatgagctatttacacttgttgaaaagactatcaaaatgagatta
gtgaacttaataaaaagtcaaccgcaagaagaaaagccaggggagtctttactagcagga
gcacttgccatggggctatgtttcatttctaaaatacggcgagagtcatccccagcatta
aaaataagtagtagaattcttattgtgacgggcagctcagacactgctgcacagtatatt
aattatatgaatgtgttcttcactgcacagaaacagcaagtattaatagatgtttgttcg
ttagacaagcatttaagtttgctacagcagggatgtgatatcactggtggattatatctc
aaagtgccatctttagaaggattgctacagtatttattgtgggtattccttccagaaggc
tcggaacgcaggcagctagtacttcctggccgtggccgcgtagattaccgcgctgcttgc
ttttgtcaccgagaactacttactataggatatgtgtgctctgtctgcttaagcgtgttc
tgcaaattcagccctatatgcaccacatgccacacggtattcaaaatcgctggacccttg
cagatcaagccgaaaaagaagaaaatgaaagtgtaa
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