Pieris rapae (cabbage white): 110997410
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Entry
110997410 CDS
T05162
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prap03021
]
110997410
Transcription machinery [BR:
prap03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
110997410
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
110997410
NCBI-ProteinID:
XP_022121253
LinkDB
All DBs
Position
11:complement(3454380..3503277)
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AA seq
1808 aa
AA seq
DB search
MTHQNHQTNGASLEDCHTNFFALTELHGIKWRKLVWGETSGGGETEDGAAPLADPVISSY
ARCLAGDILCVWRRVPDPQPLDLDMSTPAPPPLSLRASKELWIFWYGEEPDLTGLVASEL
LESQGDQGSWESGLSYECRSLLFKALHNLIERCLLSRDFVRLGKWFVQPYDGDEEDVGKS
PWHLSFSFAFFLHGESTVCASVDVRQHPPVRTLTAKRLARLHAPPAHSPKDNKVILAPFG
LEGRVTGREWTDSDPATARLLDAWRHLYPLEQATAAVEVECGGVRMRYPVPYVLVTEMEA
HPGTPPPAAELAARTLRSLTTPIAHQTPELSFAETSGDPSDDFVDPTRKTGCACAKWRRR
RAPRPTPFHRRAPPRPPRSPRSPRAARHHAPIPQANNCSGGNGRGTCSPASCGGASPAAP
GSAPSPHHTTLPSHQGPNVPTTLHTPAPTPDPLAPPTPAPPSHHNHKLFTQGDSPPAGST
LSTTGGQSPSAAGAGAGTGTAPVPLPRRPLLPAAEKRLDPLEDEHSLHMLYDYTTVHAWL
EHPVKRFKSDENKFREELVLGTTGVDLYAGQEYTRPPDYIHRVDIKQEKVEQEDVKDYKN
LFRLDGLCPTYKDLEQIFDNSDDAASGDETVRLLQVQTPPDSNKSSEVRCVRAEELSKMF
PTPPSMEAHAQSSPGFCADETITAGTLTRHGSPPRDPIEDWSYVFKPATVYKYVGSSKYA
PLTTLPSQLLPPVVLPPHAVYRPRWQHDSNTTEHDATHAHATTEAGTTSTSNTTTTTGGV
KRALSTTSSTGRARALASPRRAAPPPPSPVSPRTPAPACPLLLNVLLADTVLNVFRDHNF
DSCTVCVCNASGRSVGNIRGADASTYLCGVEWGGADEEPTRCSCGFSAVVNRRLAHRAGL
FYEDELEITGVAEEPRRRGAGDALGEVASVVVALCAAPAASAASALSRAARRAAAALAPT
HTDTRLNLLEYSDGGAAAMCALRAAAGGALSITATKNKNGITMGAVHRWPFIGARAPRSS
RDVVRLMRRLRPLLQDAIQKRCAGARMWDGVTGPLTWRQFHLLAGRGNEDRCEPQPVPPL
LVGHDRDWVSLSPYALRHWERLALEPYSYSRDVAYVVLAADGEALTEPVRTFFRELSAAY
EAAKLGRHQPISRIARDGIVRTAPAEIDRDTNCEEWTGELPPGRLGEYVRAYAETLRANL
VPQLAALNVDKTLFESPNSTGAMRPPAAPDRPDTPGGAGGTEPEIDTGTGGLGTASSAWE
EEEGGPPALVLYVVEPPAAHAHRPRALHALLRLVAQAHHHLHHHNPLIKIISLEGVCETW
CGAGGGGATSEPGLVAELRALAFSVFASARRNLAHTPNGKSLTGFGTAADANLFVSNKDE
KNRAPYRLFSPAWVLAPPRAPKEVAETWGQAGEHGAVLYVAYCLSHDQRWLLASATDARG
ELLDTAAINIYVPARSRRKRGGPARRHGLTKLMDFALGVMSQAAQPWRLVVGRVGRIGHG
ELKGWSWLLSRPNLSRLSTTLREMCGSCSLLYPTGAPCILSACLVSTEPDPCLRLMADRF
TPDERFSKASIQSHLHTPRDVTATHILVFPTSATTQSNQMPYEQPAANGEENDMLLIGLE
MVDEDIGEDQMADLLITDMFQCWQGGGSPRRDDEPGSREGSPPGGPAAAAVGAYARDHEP
QPEQVGTVLQQPLALGYLVSTAPLGSMPAWWWAGCAHLRDACPAFLKNALHLQCSLLPND
DYAFTQRRDHNAHPLDSTTTTDVLRYVLEGYNALSWLALDGTTHDRMSCLPLHVQVLMQL
YHTAAALG
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatcaaaatcaccaaacaaacggtgctagtctcgaggattgccacacaaacttc
ttcgccttgactgaacttcacggcataaaatggcgtaagctagtatggggcgagacaagc
ggcggcggcgagaccgaagatggggcggcgcctctggcggatcctgtgatcagcagctat
gcgcggtgtcttgctggagacatactgtgcgtatggcgacgtgtgccggacccgcaacca
ctcgacttagatatgagtacgccagcgccgccgccgctttccctgcgagcctccaaggaa
ctgtggattttctggtacggcgaggagcccgacctcacaggactcgtcgcttccgaactg
ctggagagtcagggtgaccagggttcctgggaaagtggactatcgtacgagtgtcggtct
cttctattcaaagctctccataatctcattgaaagatgtttgctatcgcgggactttgtg
aggcttggaaagtggtttgtgcaaccgtacgatggagacgaagaggacgttggcaaaagc
ccgtggcacctgtcattctcgttcgcgttctttctgcacggcgagagtactgtgtgcgcg
tcagttgatgttcgccagcatccgccagttcgtacgctcacggctaagaggcttgcgcgg
ttgcacgcaccgcccgctcattcaccaaaggataacaaggtgatcctggcgccattcgga
ctggaaggccgcgtgacgggcagggagtggaccgactcagatcccgctactgcccgtttg
ctcgacgcctggaggcatctctatcctttggagcaagctacagctgctgtagaggtggaa
tgtggcggcgtgcgcatgcgttacccggttccgtacgtgctcgtgacggagatggaagcg
catccgggtacgcccccacccgcagcggagcttgctgcacgcacacttcgctcgctcact
acgcctatagcccatcagactcctgagttaagcttcgccgagacatccggggacccaagt
gacgacttcgtagacccaacacgcaaaactggttgcgcctgcgcaaagtggcggcggcgc
cgagccccgcgcccgacgcccttccaccgccgcgcgccgccccgcccgccccgctcgcca
cgctctcctcgcgccgcaaggcatcacgcgcccatcccgcaagcgaataactgcagtggc
ggtaatggtcgcgggacgtgttcgccggcgagttgtggtggggcttcgcccgctgcgccc
ggctcggcgccttctccccatcacaccacgttaccttcacatcagggtccaaacgtaccc
acgacgctgcatacgccagctccaacgcccgacccgctggctccacccacacccgctccg
ccttcacatcataatcataagctgtttactcagggcgactctccgccggcgggaagcacg
ttaagtacaacgggagggcagtcgccgagtgcggcgggggcgggggcgggcactgggaca
gccccggtgcccttgccgcggcgaccgctcctacccgctgctgagaagcggctagacccg
ctagaggatgaacactcgctgcatatgctctacgattataccaccgtgcacgcctggctg
gagcacccagtgaagcgattcaaaagtgacgagaacaagttccgtgaggagttggtgctg
ggtacgaccggcgttgatttgtacgcgggacaagagtatacacgcccaccggactacata
cacagagtagatatcaaacaggagaaagtcgaacaggaggatgtaaaggactacaaaaat
ctatttagattggacggtctgtgtccgacttacaaagatttggaacagatttttgacaat
tcagacgacgccgctagcggcgatgagacggtaagacttttacaagtgcaaacgccaccg
gactcgaataagtcatcagaagtgcgatgcgtacgtgcagaagagctgagtaagatgttt
ccgacgccgccaagtatggaggcgcacgcgcagtcctcaccaggattttgtgctgacgag
accataactgccggaacgcttacacgtcatggaagtccgcctagagaccccatcgaagat
tggtcgtatgtattcaagccagcaaccgtatacaagtacgtggggtcatccaaatacgcc
cccttgactacgttacccagtcagctgttaccgcccgtggtattgccacctcacgccgtg
taccgcccgcgatggcagcacgactctaacacgacagaacatgatgcgacgcatgcgcat
gcaacgacggaagcaggcacaacaagtacaagcaataccacaacaaccaccggtggggtg
aagcgagctctatcgacgacgtcaagtacgggacgagctcgggccctcgcctcccctcgc
cgcgctgcacccccaccgccctctcccgtctcacctcgtacccctgcacccgcctgcccc
ttacttctgaacgtgcttctcgcggatacggtgctcaatgtcttcagagatcacaacttt
gacagttgcacagtgtgtgtctgtaacgctagtggacggagcgtgggaaacattcgaggc
gcggatgcatctacttacttgtgtggcgtggaatggggaggcgcagacgaagagccaact
cgatgttcgtgtggttttagcgctgtcgttaatagacgacttgcacatcgcgctggacta
ttttacgaggacgaattagagataactggcgtagcggaagagccgcggcgtcgcggtgcg
ggagatgcgttaggcgaagtggctagcgtggtggtggcgctgtgcgccgcacccgctgcc
tccgccgcctctgcgctgtcccgcgccgcgaggagggccgccgcggcccttgcccccact
cacaccgacacgcggctcaacctgctcgaatactcagatggcggtgcggcagcaatgtgt
gcgctacgtgcggcagccggcggcgctttgtccatcacggccactaagaacaagaatgga
atcacgatgggagcggtgcatcgatggcccttcattggtgcgcgtgcgccgcggtcttca
agggatgttgtgagattaatgcgccgcctccgaccattactacaagacgcgatacagaag
cgttgcgcgggcgctcgtatgtgggacggggtgactgggccgctcacgtggcgacagttc
caccttttagccggccgaggcaacgaagaccgctgcgagccacaacccgtccctccgcta
cttgtaggccacgatcgcgactgggtttctctatctccctacgcgcttcggcattgggag
cggttggcattagaaccttattcgtatagccgggatgtcgcgtacgttgtactcgctgca
gacggtgaggcactgacggagccggtgcgaacgttctttagagagctctcggctgcctat
gaagcggcgaagctgggaaggcatcaaccgatatccaggatagcgagggatggtattgtg
aggactgcaccagctgaaattgatagggatacaaattgcgaggaatggacgggcgagtta
ccaccggggcgtttgggagaatacgtgcgcgcatacgccgagaccttgcgggcgaaccta
gtaccgcaactagccgctttaaacgtcgataagacgttattcgaatcaccaaatagtacg
ggagcaatgcgaccgccagctgcacctgacagaccggatactccgggaggggcgggtgga
actgagccggaaatagataccggaacgggcggattgggcacggctagcagcgcctgggaa
gaagaagagggcggtccgcccgccctcgtgctctatgtcgtcgagccacctgcagcacat
gcgcatcgcccacgagcattgcacgcccttttacgacttgttgcgcaggcgcatcatcat
cttcatcaccacaatcctcttatcaagatcatatccctggagggtgtttgcgagacgtgg
tgtggggcgggcggtgggggggcgacgagtgagccgggtctcgtagcagaacttcgtgca
ctcgcctttagtgtgttcgcgagtgcacgccgcaatctagcgcacacgcccaacgggaaa
tcgctcacgggctttggcactgctgcagatgctaatctcttcgtttctaataaagacgag
aaaaaccgcgcgccgtaccgtctcttttcaccggcgtgggtgctggctccacctcgcgca
cccaaggaggtggcagagacatggggccaggcgggcgaacatggcgccgtactttacgtg
gcctactgcctctcacacgaccaacgctggttgctagcttctgccactgatgcacgcggg
gagctactcgacacagccgctattaatatctatgtacctgccagatcgcgccgaaaacgt
ggtggtcctgcacgaaggcatgggctgacgaagctgatggatttcgcgctaggcgtaatg
tcacaggccgctcaaccctggaggctggtagtgggacgagtcgggcggataggacatggc
gagctcaaaggttggagttggctgctgtccaggccgaatctgtctcgcctgtcgaccaca
ctgcgcgagatgtgcggcagctgctcgcttctatatcccacgggggcaccctgcatcctt
tccgcctgcctcgtgtccaccgagcccgacccctgtctacgactcatggccgaccgcttc
acgcccgacgagcgcttttcgaaggcctccatccaatcccacctgcacacgccacgcgac
gtcaccgccacgcacattctcgtcttccccacgtcggccaccacgcagtccaaccagatg
ccctacgaacagcccgccgccaacggcgaggagaacgacatgctgctcatcggactcgag
atggtcgacgaagacatcggcgaggatcagatggctgacttactcatcaccgacatgttc
caatgctggcaaggcgggggatccccgcgccgagacgatgaaccgggtagccgcgaggga
agtccgcccggtgggccggctgccgcagccgtcggggcttacgcccgcgaccacgagccg
caacccgagcaagtgggcacggtgctccaacagccgctggcgctgggctaccttgtgtcg
acggctccgcttggttccatgcctgcctggtggtgggcagggtgcgcacacctgcgcgac
gcatgccccgccttcctcaagaatgcgctgcacctacagtgcagccttttgcctaacgat
gactacgccttcacacagcgccgcgatcacaacgcgcatcctctcgattccaccaccacc
acagatgtactcagatacgtattagagggatacaacgccttatcttggctagcactggac
ggaaccactcacgaccggatgtcctgtctcccgctgcacgtgcaggtccttatgcagctt
tatcacaccgcagccgcgctcggctga
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integrated database retrieval system
