Pieris rapae (cabbage white): 110997431
Help
Entry
110997431 CDS
T05162
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04120
Ubiquitin mediated proteolysis
prap04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110997431
04120 Ubiquitin mediated proteolysis
110997431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prap04121
]
110997431
Enzymes [BR:
prap01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110997431
Ubiquitin system [BR:
prap04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110997431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-RING_11
zf-C3HC4_3
zf-RING_5
FeoB_C
zf-ANAPC11
Endonuclease_7
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
110997431
NCBI-ProteinID:
XP_022121276
LinkDB
All DBs
Position
1:12756618..12760451
Genome browser
AA seq
542 aa
AA seq
DB search
MTVKMKALVAAAISLALTTIVIGNAYYQKKQFYPSVVYLTNSNPSMAVMYLQGLILVLLV
GKIIRKIFFGQLRPAELEHLMERSWYAITETCLAFTVFRDDFNPKFIALFTVLLFLKAFH
WLAEDRVDYMERSPVIGWLFHVRILTLLLLLAQADFFFIHHAYQFTLLKGPSVQLVFGFE
YSILLVMIVNILIKYILHAIDSRWEAPWESKAAVLLYTELAINFFKVLLYIGFVVIMVRI
FTLPLFAFRPMYETMRSFKRAYSDVVLSRRAIRNMNTLYPDATAEELAAADNECIICREE
MHGGAKKLPCNHIFHAACLRLWFQRQQTCPTCRLNVLRAPAADAAPHAPHAAPAPHAPNA
PRAPHAAPPPPFPNVPPPPMMAWGMPPAPPPRPASLATLSAEELQRMEGTERRNVEARLH
LLHEIQAMLDASVLLMQQYSSVVANLPLDRNDVATQTDVNRPEPAPAPAPAPAPAPSSAE
TPSAVAGTSFEAAPGPSGSSDTFEDFAFDEADKLPTDTFSERPDADAEELRRRRLQKFSL
EN
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaaaatgaaggccttagttgcagctgccatcagtcttgcacttacaactata
gttatcggcaatgcatactaccagaagaaacagttttacccttccgttgtttatctcact
aactcaaatcctagcatggctgtcatgtatttacaaggattaattcttgttcttctagtt
gggaaaattatacgtaaaattttctttggacagctgcgtcctgctgaacttgagcattta
atggaaaggtcctggtatgcaatcacagaaacttgtttagctttcactgtgttcagggac
gattttaaccctaagtttatagcactgtttactgttttattattcttgaaagcattccac
tggttggctgaagatcgagttgattatatggagaggagtcctgtcataggttggttgttt
catgtgcggattttgacattgcttttgctgttggcacaagcagatttctttttcatccat
cacgcttaccagtttacccttcttaaaggaccatcagttcaacttgtatttggatttgaa
tacagcatattactggtgatgatagtaaacattttgataaagtatattttgcacgcaata
gactcgcgttgggaagctccatgggaaagtaaggcagcagtgttgctctacactgaatta
gcaatcaacttcttcaaggtcctgctttacatcggctttgtagtgatcatggttaggata
ttcactctaccgctctttgccttcagacccatgtacgagaccatgaggagtttcaagcga
gcgtacagtgacgtggtgttatcgcgtcgggccatacgaaacatgaacaccctgtaccct
gacgccacggccgaggagctcgcggccgcggacaacgagtgcatcatctgccgagaggag
atgcacggaggtgccaagaagcttccgtgcaaccacatcttccacgctgcgtgccttcgc
ctctggttccagcggcagcagacgtgccccacctgccgcctgaacgtgctgcgagccccc
gcggcggacgccgctccccacgccccgcacgccgcccccgcgccccacgctccgaacgct
ccccgcgcgccccacgccgcgcccccgccgcccttccccaacgttccgccgccgcccatg
atggcctggggcatgccccccgccccgccgcctcggcccgcgtcgctcgccacgctctcc
gccgaggagctgcagaggatggagggcaccgagaggaggaacgtcgaggcccggctacac
ttgctgcacgagatccaggcgatgctggacgcgtcggtgctgctgatgcagcaatactcg
tcggtggtcgccaacctgccgctggaccgcaacgacgtcgccacgcagacggatgtcaat
cgccccgagccggctccggctccggctccggctccggccccggcgccgagctccgccgag
accccgagtgccgtcgccggcacctcgttcgaggcagctccgggaccctccggctcctcc
gacaccttcgaggactttgcttttgacgaagcggacaaactcccgaccgacactttcagc
gaaaggccggacgccgacgccgaagagctgagaagacgtcgattgcagaaattcagctta
gagaattga
DBGET
integrated database retrieval system
