Pieris rapae (cabbage white): 110997520
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Entry
110997520 CDS
T05162
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03013
Nucleocytoplasmic transport
prap03015
mRNA surveillance pathway
prap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110997520
09122 Translation
03013 Nucleocytoplasmic transport
110997520
03015 mRNA surveillance pathway
110997520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
110997520
03041 Spliceosome [BR:
prap03041
]
110997520
03009 Ribosome biogenesis [BR:
prap03009
]
110997520
03012 Translation factors [BR:
prap03012
]
110997520
Enzymes [BR:
prap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110997520
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110997520
mRNA cycle factors
Stress granule specific factors
110997520
Spliceosome [BR:
prap03041
]
Complex C
Other components
EJC/TREX
110997520
Ribosome biogenesis [BR:
prap03009
]
Eukaryotic type
90S particles
Helicases
110997520
Translation factors [BR:
prap03012
]
Eukaryotic type
Initiation factors
eIF-4
110997520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Cas3-like_C_2
UvrD-helicase
TniB
AAA_30
Utp25_C
Motif
Other DBs
NCBI-GeneID:
110997520
NCBI-ProteinID:
XP_022121403
LinkDB
All DBs
Position
11:complement(8427965..8429978)
Genome browser
AA seq
404 aa
AA seq
DB search
MTSSEVSFSRKITEDLSNVEFDTSEDVEVIPTFDSMNLKDELLRGIYTYGFEKPSAIQQR
SILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQKVIL
ALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLD
EADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELT
LEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSM
HGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGR
SGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLF
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgtcagaggtatcatttagcaggaagattacagaagatctctcaaatgttgaa
ttcgacacaagtgaagatgtggaagttattccaaccttcgattctatgaacttgaaagat
gaattgttacgaggaatctatacatatgggttcgaaaagccatctgcaattcagcaaaga
agtattctgcctatagttaaaggacgagatgttatcgcccaagcacagtctggtacaggc
aagacagctacattttctatctcaatactgcaatcgttggacaccacattacgtgagacc
caagtattggtcctatcacctacacgagagttggctacccaaattcaaaaagttatatta
gctctaggagactatatgaatgtacaatgccatgcttgtataggtggaaccaatttgggt
gaagatattaggaagttagattatggacagcatgttgtctctggaaccccaggaagagtc
tttgatatgataagaaggcgtgtactccgaacacgttctattaagatgcttgtccttgat
gaagctgatgaaatgttgaacaaaggatttaaagagcagatttatgatgtctatcgttat
ttgcctccagctactcaagttgtattaatatctgctacattgccccatgaaattcttgaa
atgacctcaaagtttatgacagatcctatcaggattttggtaaaacgtgatgaactgaca
ctcgaaggaataaaacaattctttgtagctgtagaacgtgaagagtggaagttcgacaca
ttgtgtgatttatatgacacattgactataacacaggcagttatattttgtaataccaag
aggaaggtggattggttgacacaaaaaatgcaagaggctaactttacggttagttcaatg
catggtgatatgcctcagaaagaaagagacaacattatgaaggaatttagatcagggcaa
agccgggtcctcattacaacagatgtctgggcaagaggaatagatgttcaacaagtctca
ttggtaattaactatgacttaccaaacaaccgtgaattgtacattcacagaattggcaga
tcaggacgttttggacgtaaaggtgttgcaatcaactttgtaaaatctgatgatatcagg
attttaagagatattgaacaatactactcaacccaaattgatgagatgcctatgaatgta
gcagatttattctaa
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integrated database retrieval system
