Pieris rapae (cabbage white): 110997650
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Entry
110997650 CDS
T05162
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap00450
Selenocompound metabolism
prap00970
Aminoacyl-tRNA biosynthesis
prap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
110997650
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110997650
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
prap01007
]
110997650
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prap03016
]
110997650
Enzymes [BR:
prap01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
110997650
Amino acid related enzymes [BR:
prap01007
]
Aminoacyl-tRNA synthetase
Class I (U)
110997650
Transfer RNA biogenesis [BR:
prap03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
110997650
Prokaryotic type
Other AARSs
110997650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
WHEP-TRS
Anticodon_3
GST_N_5
tRNA-synt_1
GST_C_6
Arc1p_N_like
GST_C_3
GST_C
GST_C_2
tRNA-synt_1e
MIP-T3_C
Motif
Other DBs
NCBI-GeneID:
110997650
NCBI-ProteinID:
XP_045487327
LinkDB
All DBs
Position
15:8871681..8890225
Genome browser
AA seq
985 aa
AA seq
DB search
MKIYTNDNNTSTLKLLIAANLAGKKLELQKSTFEDQFSGPKCLPLLEVDEELTFFSSNAA
VQYLFPILDLSKNGQCQQMQEWEAIRLQPAVANVLSGKTVPADVKQVLQSLVLVLNELLK
KHKYIIGDKLSAADISIWSTLYPLLYNEELKSYLSECSHILQWAEELNKAKAFQEAVKQW
GGNPKGPFSSISALGTPQITNLPTPTGSPDDSVPISVSPEEADLAQENWINGLKNLQAPI
KQEKLVLPVKDRKNVLITSALPYVNNIPHLGNIIGCVLSADIFARYCRLCDYNTLYISGT
DEYGTATETKALEEGVTPRQICDKYYEIHNSVYRWFNIGFDYFGRTSTPEQTEIVQKLFL
KVLDNGFMSTQSVEQLFCEKCERFLADRFVEGKCPHPGCAYDGARGDQCDKCGKLINAIE
LIEPKCKVCAHRPTVRPSEQLFIELGQLEPSIRSWMSSVEGNWSGPARAVSRAWLREGLR
ARAVTRDLKWGVPVPLDKYKHKVFYVWFDAPVGYTSITQCATKQYEKWWKPDKDYDVKLY
QFMAKDNVPFHAIMFPASVIGANEGHKLVDYIFATEYLNYEEGKFSKSRGVGVFGTDAQE
TGIPSDVWRFYLASIRPETSDSSFNWTELCTRNNSELLNNLGNFCHRSLSFCANTFKGKI
PEMSFSNTDYVLFALVNREVVAYVQNMEKGRLREALRHVMSVSRLGNQHMQSEQPWVLLK
GSPEEKIRGSTAIAVCCQLVALLCTLIAPYMPDTSRKLKAQLNLPDTSFRINPTNPALFQ
YIPKGHVIGKPEPLFAKIEQELVDTMRAKYAGTQAERAKQNGDVKTGASTNVADLEKAIA
AQGEKVRQLKASTKDKAVWQPEVNKLLELKKQLTAAQSQPVMDVASLEKAIAEQGEKVRK
LKASTKDKTVWQPEVNKLLELKKQMATAQASIATPANVASLEKAIADQGDKVRKLKASTK
DKSVWQQEVNVLLDLKKQLAAAQTK
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatacacaaacgataataatacttcaacgctaaaattgttgattgcggcaaat
ttagctgggaaaaagttagaattgcaaaaatctacatttgaagaccaattttcaggacca
aaatgccttccattgcttgaggttgatgaagaactaacatttttctcaagtaatgcagca
gtacaatatctatttcctattctggacctttctaagaatgggcagtgccaacaaatgcaa
gagtgggaggcaattcgtcttcaaccagcggtagcaaatgtactgtcaggaaaaactgtt
cctgcagatgtaaaacaagttttacaatcccttgtacttgtgttgaatgaattgttgaaa
aaacataagtatattataggggataagctttcagcggcggatatatcaatatggagtaca
ctctatcctctactatataatgaagaattaaaatcatatttatctgagtgttctcatatc
cttcaatgggctgaagaactgaataaagctaaagcttttcaggaagcagtgaagcaatgg
ggtggaaatcctaaaggtccatttagtagcatctcggcattaggcactccacaaattacc
aatttgcctacgcctacaggatcgccagacgattcagttcccatcagcgtatcaccggaa
gaggcagatttagctcaagaaaactggataaatggattaaagaatctgcaagctcctatc
aaacaagagaaattagtgttgccagttaaagatcgcaaaaatgtacttataacatcagcc
ttgccatatgtaaataatatcccacatttggggaatattattggttgtgtgctctccgct
gatatatttgcaaggtattgtcgtctatgtgattacaacaccctatatataagtggtacg
gatgaatacgggactgctactgaaacaaaggctcttgaagaaggagttactccacgacaa
atatgtgataaatactatgaaatccacaattcagtttatcgctggtttaatattgggttc
gattattttggacggacaagcacgcctgaacagactgaaatagtacaaaagttattcttg
aaagtcttggacaatggcttcatgagcacgcagtccgttgagcaattgttctgcgagaag
tgcgagagattcctggcagatagatttgtagaaggcaaatgtccgcaccctggctgcgcg
tacgatggtgcacgcggtgatcagtgtgataaatgcgggaaattgattaatgcgatcgaa
ttaatcgaaccaaagtgtaaagtgtgtgcgcacagaccaactgtcagacctagtgaacag
ctatttattgaattgggacagttggagccatcaatccggtcgtggatgtcgtcagtggaa
ggtaattggtcggggccagcgagggctgtgtctagggcctggttaagggaagggttgcga
gcgagggctgttacaagggatctcaagtggggcgtgcctgtgccgcttgacaagtataaa
cataaggtattctacgtgtggttcgacgcgccagtcggctacactagcataacccaatgt
gctactaagcaatacgagaaatggtggaagccggataaagactatgatgtaaaattgtac
caattcatggcgaaagacaacgttccattccacgctataatgttcccggctagcgttatt
ggcgcgaacgagggtcataaacttgtggactatatatttgctactgaatatttgaactat
gaagaaggcaaattttccaaatcccgcggcgtcggtgtctttggtacagatgcgcaggaa
actggaatcccatcggatgtatggcgattctatttggccagtattcgaccagaaacttct
gattccagcttcaattggacagaactgtgtactagaaataattcagaattactaaacaat
ctcggtaatttctgccatcggtcactcagtttctgtgcgaatacgttcaaagggaagatc
ccagagatgtcattttcgaacacagattatgtgctatttgcgcttgtcaacagagaagtc
gttgcgtacgtacagaacatggaaaaaggtcgtcttcgagaagccctccggcatgtcatg
agtgtctctcgacttgggaaccaacatatgcagagcgaacagccctgggtcctgcttaaa
ggatctccggaagaaaaaattcgtggttcgactgcgatagccgtttgttgtcagttggtg
gcgctattgtgcactttgatagcgccatatatgcctgacaccagccgaaagctgaaggcc
cagcttaacttgcctgacaccagcttcagaatcaaccccacgaatcccgcgttattccag
tacattcccaagggacatgttattggcaagccggagccgctattcgccaaaatagagcag
gagttagtggacactatgagggccaaatatgcggggacacaagccgaaagagcaaagcaa
aatggtgatgtgaaaactggcgcctctacaaatgttgcagatttggagaaagctatcgct
gcgcagggtgagaaagtgcgacagttaaaagcgtctactaaagacaaggccgtgtggcaa
ccggaagtgaacaaacttctcgagttaaagaagcaactgacagctgctcaaagtcagccc
gtgatggatgttgccagtctcgaaaaagctatcgctgaacagggagaaaaggtgagaaaa
ttgaaagcgtccactaaagataagacagtgtggcaaccggaagtgaacaaattgctggaa
ttgaaaaagcaaatggcgaccgctcaggcgagtatagcaacacccgctaatgttgccagc
ttggaaaaagcaatcgctgatcagggtgacaaagttcgaaaattaaaagcatcgacaaaa
gacaagtcagtgtggcaacaggaagtcaacgtgttgctagatctcaaaaaacaactcgct
gcggcgcaaactaaataa
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