Pieris rapae (cabbage white): 110997757
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Entry
110997757 CDS
T05162
Name
(RefSeq) collagen alpha-1(XI) chain-like
KO
K13884
macrophage receptor with collagenous structure
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
110997757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prap04131
]
110997757
Membrane trafficking [BR:
prap04131
]
Endocytosis
Phagocytosis
Scavenger receptors
110997757
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
110997757
NCBI-ProteinID:
XP_045490653
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All DBs
Position
3:9602921..9610899
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AA seq
420 aa
AA seq
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MVNVQILVFLLYSFQFVNGEATESGTVSTSSQEAPIPDDSQAQIISAELRECGLRITGPG
LTWQKVTVCSTAYANPPEIPKIKGTLGVTGIQGLKGEPGLKGEPGAQGSLGLKGEQGIQG
PPGVKGEPGLRGVLGPMGPQDPGSVGFQRRGLVGQKGDKGRIGKDGSGGEKGDRGSTGPK
GVKGDQGASIPGLQGPPGQPGPYNVYSHLLSVESPKNDFGEVLEFEARNRYPGTQLNPAK
SCANIEDDGSTDGDYFLNPDSKFIARCDFIKQSACLSLEYDEEPKLCDRKPCWLLKSGFN
IGKFYRKQLKNIKYLSTLTGTTHSTHKITIICKYLRLSEESNLQIQLYHMLLIGPEASNE
TPLHYKVNSENCNSETDEGSAEIEITIIGPFLPITDFYIRDFNEKSELIFDKTEVCFYYK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgttcagatattagtgtttttactatatagttttcaatttgtaaatggagag
gcaacggaatccggcactgtatctacttcaagtcaagaagctccaataccagatgattct
caagcccaaataatatcagctgaactgagagaatgcggtttacgaataacaggacctggt
ttaacatggcagaaagttactgtttgctccacagcgtacgccaatccaccagagatacca
aaaataaagggaactcttggagttactggaatacaaggacttaaaggggaaccaggatta
aaaggagaaccaggggctcaggggagcctagggttgaagggagaacaaggcatacaagga
ccaccaggagtaaaaggagagccaggattaagaggagttttaggtccaatgggtcctcaa
gacccaggttcagtagggttccaaagacgtggcttagtgggacagaaaggtgacaaagga
aggataggtaaagatggtagtgggggagaaaagggggatcgaggttctacaggacctaaa
ggagtgaaaggtgatcagggtgcctcaattcccggtcttcagggacctcccggtcaacca
ggtccttacaatgtatacagccatctcttgagtgttgaatcaccgaagaacgactttgga
gaggtactagagtttgaagcgcgcaacaggtatcccggtacccagttgaatccagcgaaa
tcgtgcgcaaacattgaagatgatggcagtactgatggagattactttctgaaccccgat
agcaagtttattgcgaggtgtgattttataaaacaaagcgcgtgtcttagtctagagtat
gacgaggaacctaaactatgcgacaggaagccatgttggctgttgaagtctgggttcaat
attgggaagttttatagaaagcaattaaaaaatataaaatatttaagcacccttaccgga
acgacacattccactcacaagattaccattatttgcaaatacctgagattgagtgaagaa
tcaaatttgcaaatacaattatatcacatgctgttaattggacctgaagcgtccaacgag
acgccattgcattataaagtcaatagtgagaattgtaattcagagactgacgaaggatct
gctgaaatagaaataaccataatcggtccattcttaccaattacggatttttatataaga
gattttaatgaaaaatctgaacttatatttgataaaactgaagtctgtttttattataaa
taa
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