KEGG   Pieris rapae (cabbage white): 110997919
Entry
110997919         CDS       T05162                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110997919
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prap03019]
    110997919
   03041 Spliceosome [BR:prap03041]
    110997919
Messenger RNA biogenesis [BR:prap03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     110997919
Spliceosome [BR:prap03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110997919
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_Prp19 WD40 WDR55 NBCH_WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SCAP ANAPC4_WD40 PQQ_3 EIF3I Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 PQQ Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 WDR54 Beta-prop_IFT140_1st Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 110997919
NCBI-ProteinID: XP_022121989
LinkDB
Position
11:2729292..2731740
AA seq 325 aa
MLDKILYNTVLCQSFSPCGKYLVAGNIYGQLAVFDLDCIFNPNPELLSPDYNKAKQIHTL
DSGKQICSLVSTKKFLIAGTVNEIYGWDWKSVLNVKLCKPAWTMRIKSESIVQCDINCLW
LTDNEERLYAGCGDNKVYAINLEDGSLVQTLSGHDNFVHCVHGNNTTQLISAGEDGLVLL
WDLRTSKCQNKIEPYKNSKVARPDVGKWVGAASLSDDWLVCGGGPRLALWHLRSLDAVTV
FDIPDHGIHVASFLDDCVLAGGTAQHLYQLSYSGDVRVELPVSSTTVYSAIVRTSPNKVI
SIAGSSTDIDLCTSFNYRDQVLHFR
NT seq 978 nt   +upstreamnt  +downstreamnt
atgcttgacaaaatcttatacaatactgtattatgccaaagtttctcaccttgtggtaaa
tatttagtagccggtaatatatacggtcaattagcagtttttgacttagattgtattttt
aatccaaacccagagctactatcaccagactacaataaagctaaacaaattcataccctt
gattcaggcaaacaaatatgtagtcttgtaagtactaaaaagtttttaatagctggaaca
gtcaatgaaatttatggttgggattggaaatctgtcctcaatgtgaaattatgcaaacca
gcatggaccatgcggataaaatcagaatcaatagtacaatgtgatattaattgcctttgg
ctgactgacaatgaagagaggttgtacgcgggctgtggtgacaataaagtgtatgctatt
aacttggaagatggtagcttggtacagacattaagtggacatgacaactttgtgcactgt
gtgcatggcaataatactacacaactcatttccgctggtgaagatggcttagttctactc
tgggatttgagaactagcaaatgtcaaaataaaatagaaccatataagaatagtaaagtt
gctagacctgatgtgggcaagtgggttggtgcagcatcactaagtgatgattggcttgta
tgtggcggaggcccacgtcttgcgttatggcatctacgctctttggacgctgttacagtc
ttcgatatccccgatcatggcattcatgtggcgtctttccttgacgattgtgttctagcg
ggaggaacggcccaacatctttatcagctcagctactctggagatgttagagttgaactg
cctgtgtcttcaacaaccgtgtactctgccattgtacggacaagcccaaataaagttata
tccattgctggttctagtacggacattgatctgtgtacttcgtttaattatagggatcaa
gtgttacattttagatga

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