Pieris rapae (cabbage white): 110998752
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Entry
110998752 CDS
T05162
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04140
Autophagy - animal
prap04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110998752
04148 Efferocytosis
110998752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prap04131
]
110998752
Membrane trafficking [BR:
prap04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110998752
Hops complex
110998752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
110998752
NCBI-ProteinID:
XP_045485146
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Position
8:8773348..8783230
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AA seq
836 aa
AA seq
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MSALLTADWFQLDSYYRKFDLYNMLWSMDDGLDNMIVSGAAYGGPIAVVRDRKQFVRVAT
TAKPVITIYNGVGNIISKILWNSGVLVHMGWSDAEQLLCVQESGDVLIYDMFGAYQKTFS
MGQEVRDTKVCKAQLFPSPHGIGLAIITTTNRMFLVSNVSDPKVRSLPDLPRPNLTISCW
CVLSSGQHSSSQISILICRDKEVFKCQLGETRAILNMKAEFRNPYTQVLSIVPSQNGRHV
ALFTDSGFLWIGSADFKNKYCEIDTGFIKQPKELVWCGSQAIIGHWDDTMSIYGFNAQNI
TYPYDGPFHLIQEMDCVRVVSEFTHELIQKVPIVVEKIFRINSTAPGSYLVEASKQFQKR
SHRADEYIRLVKPDLSSAVQDCIDAAAFEFDTDVQKMLIRAAQFGKGFLLEPALTEHYVK
TCRWLRVLNAVRDTRVAIPLTYLQVQNLGERVLLDRLIWRRLHCLAGHIASYLQLKDGQT
RVLSHWACYKVTQPHLDNESAAREIGEKLRNIPGISYSTIAMKAAEKGRKALAIKILEYE
THSKLQVPLLLSLEEGVIALLKATASGDTDLVYIVLLHLKEKMGKHEFELTIRSLPLAHA
LYIKYCAGHNREALRQVYVQEDDFQGQASTHIRDAIDQTNPGSIEASLISARECYKKGKN
DLGASVCEDARKLCKQQSSLQETYGTSFVGLSLHDTVGKLLKEGEVKLAEKLRSEYKMPD
RRYWWLRILTLAEKGEWDDLEKFSKTKKSPIGYEAFVDACLSRGQKDEALKYLPRCRDDI
KVKYYVKAEFYEEAAQVAFEQKDESALFFVQNKCPLREVTKHEKISALLEQLTARK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccctccttactgctgattggtttcaattggattcctactataggaaattcgac
ttgtataatatgctatggtccatggacgatggtcttgataacatgatagtcagtggagca
gcctatggaggccctatcgctgttgttagggacagaaaacaatttgtaagagtagcaact
actgcaaagcctgtaataacaatctacaatggagttggtaacataatatctaagattttg
tggaacagtggtgttcttgtgcacatgggatggtcagatgcagaacagctcttatgtgta
caggagagtggtgatgtactcatatatgacatgtttggtgcctaccaaaaaacatttagt
atgggacaagaagtgagagatacaaaggtgtgtaaggcacaattgttcccaagcccacat
ggaattggtcttgcgatcatcaccactactaacagaatgttcttggttagcaatgtatct
gatccgaaagtccgatctttgcctgacctaccaaggccaaatcttacaatcagttgttgg
tgtgtgttgagttctggtcagcattcgtcttcacaaataagtattcttatctgtcgagat
aaagaggtatttaaatgccaattaggagaaactagagctattttaaatatgaaggcagaa
ttcagaaacccttatacacaagtattatctatagtgccgtcacaaaatggacgacatgtt
gccttatttacagactctggctttctatggatcggttcggccgatttcaagaataaatat
tgcgaaattgataccggatttattaaacaacctaaagaattagtatggtgtggctcccaa
gcaataatcggacattgggacgacacaatgtctatatacgggttcaatgctcagaatatc
acatacccatacgatggaccattccatttgattcaggaaatggattgtgtgagagtagta
tcggagtttactcatgaactgatacaaaaggtcccaattgtggtggaaaagatatttagg
atcaatagtacggcgcctggttcatatttggttgaggcttctaaacagtttcagaaacgc
agccaccgcgcagatgaatacatacgactggtgaaaccagatttatccagtgcggtacaa
gattgcattgatgcagcggcctttgaattcgacactgatgtacagaaaatgcttatacgg
gcagctcagttcgggaaaggtttccttctagaaccagcattgacggagcactacgtcaag
acttgcagatggctccgggttctcaacgcagtacgagatacaagagttgccataccgctg
acctatttgcaagttcaaaatcttggcgaaagagttttactagatcgactaatatggcga
cgattgcattgtctcgcgggacacattgcctcttatctccaattgaaagacggacaaaca
cgtgtgctgtcacattgggcgtgttacaaggtgacccaaccgcatttggacaacgaaagt
gcagcaagggaaataggtgaaaaattgagaaatatacctggtatttcgtattcaacgatt
gctatgaaggccgctgaaaaggggcggaaagctctagctattaaaatcttagaatacgaa
actcacagtaaacttcaagttccccttctcctatcgttagaagaaggagtaatagcatta
ttgaaggctacagctagcggcgatacggatttggtgtatattgtcctattgcatctcaaa
gagaaaatgggaaaacatgagtttgagctcactatcagaagcttgcccctcgctcatgcg
ttatacataaagtattgtgcgggtcacaatcgtgaggcattgaggcaagtgtacgttcaa
gaagatgactttcaaggtcaagcgagcacacacatccgagacgcgatagaccaaactaac
cccggcagtattgaggcatcgcttatttcggccagagagtgctataagaagggcaagaat
gatctgggcgcgtcagtatgcgaagacgcccgtaagctttgcaagcagcaatcgagtcta
caggaaacttatggaacaagcttcgttggtctctccttacatgacactgttgggaagtta
cttaaggagggagaggtcaagttagcggaaaaactacgctctgaatacaagatgccggat
agaagatattggtggcttagaatactaacgttagccgaaaagggcgaatgggacgactta
gagaagttctcgaaaaccaaaaagtccccaatcggctacgaggcctttgttgacgcgtgt
ctctcgcgagggcaaaaagacgaggcattaaaatacttgcctcgttgtagggacgatatt
aaagttaaatactacgtgaaggctgagttttatgaagaagccgcccaagtagcctttgag
cagaaagacgaaagcgccctcttctttgttcagaataaatgtccgcttcgagaagttacg
aaacacgagaaaatatccgcgctattagaacaattaacagctagaaaatag
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